Genomic map of Enterobacterial phage mEp390 (NC_019721)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_019721
Definition
Enterobacterial phage mEp390, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
40029
Host Name
Escherichia coli
Host domain
Bacteria
Is prophage?
undef
Number of proteins
59
%GC
51.67
Number of singletons
5
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_007112466.1 NC_019721_p49 holin phrog_217 holin lysis 1 34844 35125
YP_007112463.1 NC_019721_p46 late gene regulator Q phrog_79 anti-termination protein Q-like transcription regulation 1 32955 33338
YP_007112424.1 NC_019721_p7 head-tail connector II phrog_25 head closure Hc1 connector 1 5496 5834
YP_007112457.1 NC_019721_p40 hypothetical protein phrog_101 CII-like transcriptional activator transcription regulation 1 29435 29905
YP_007112469.1 NC_019721_p52 hypothetical protein phrog_1275 Rz-like spanin lysis 1 36024 36176
YP_007112464.1 NC_019721_p47 hypothetical protein phrog_13899 unknown function unknown function -1 33400 34218
YP_007112422.1 NC_019721_p5 major head subunit phrog_10 major head protein head and packaging 1 3979 5136
YP_007112475.1 NC_019721_p58 hypothetical protein phrog_10282 unknown function unknown function 1 39643 39879
YP_007112462.1 NC_019721_p45 hypothetical protein phrog_96 HNH endonuclease DNA, RNA and nucleotide metabolism 1 31969 32958
YP_007112476.1 NC_019721_p59 hypothetical protein singleton unknown function unknown function 1 39872 40012
YP_007112418.1 NC_019721_p1 terminase small subunit phrog_5601 terminase small subunit head and packaging 1 1 486
YP_007112447.1 NC_019721_p30 hypothetical protein singleton unknown function unknown function -1 23271 23579
YP_007112474.1 NC_019721_p57 hypothetical protein phrog_2323 HNH endonuclease DNA, RNA and nucleotide metabolism 1 39302 39643
YP_007112436.1 NC_019721_p19 central tail fiber phrog_31 central tail fiber J tail 1 14161 17610
YP_007112459.1 NC_019721_p42 hypothetical protein phrog_428 replication initiation protein DNA, RNA and nucleotide metabolism 1 30316 31269
YP_007112446.1 NC_019721_p29 hypothetical protein phrog_14816 unknown function unknown function -1 22935 23213
YP_007112448.1 NC_019721_p31 EaA protein phrog_60 unknown function unknown function -1 23576 24505
YP_007112423.1 NC_019721_p6 head-tail connector I phrog_40 head-tail adaptor Ad1 connector 1 5170 5496
YP_007112430.1 NC_019721_p13 tail length tape measure protein phrog_339 tail length tape measure protein tail 1 7928 11212
YP_007112437.1 NC_019721_p20 hypothetical protein phrog_557 outer membrane protein other 1 17610 17912
YP_007112441.1 NC_019721_p24 DinI-like family protein phrog_189 RecA filament binding protein DinI DNA, RNA and nucleotide metabolism -1 20396 20662
YP_007112428.1 NC_019721_p11 tail assembly chaperone phrog_344 tail assembly chaperone tail 1 7205 7606
YP_007112431.1 NC_019721_p14 minor tail protein phrog_14 minor tail protein tail 1 11215 11553
YP_007112440.1 NC_019721_p23 tail fiber phrog_1591 tail fiber protein tail 1 18992 20326
YP_007112454.1 NC_019721_p37 prophage repressor phrog_4 transcriptional repressor transcription regulation -1 27973 28629
YP_007112443.1 NC_019721_p26 hypothetical protein phrog_3469 UmuD-like protein DNA, RNA and nucleotide metabolism 1 20988 21308
YP_007112442.1 NC_019721_p25 hypothetical protein singleton unknown function unknown function -1 20782 20910
YP_007112445.1 NC_019721_p28 excisionase phrog_1266 excisionase integration and excision -1 22674 22901
YP_007112472.1 NC_019721_p55 hypothetical protein phrog_3593 HNH endonuclease DNA, RNA and nucleotide metabolism 1 38222 38734
YP_007112432.1 NC_019721_p15 minor tail protein phrog_18 minor tail protein tail 1 11550 12308
YP_007112471.1 NC_019721_p54 hypothetical protein phrog_1579 glycosyltransferase moron, auxiliary metabolic gene and host takeover 1 36724 38181
YP_007112427.1 NC_019721_p10 major tail subunit phrog_158 major tail protein tail 1 6680 7150
YP_007112434.1 NC_019721_p17 hypothetical protein phrog_890 lipoprotein other 1 13014 13460
YP_007112449.1 NC_019721_p32 hypothetical protein phrog_19550 unknown function unknown function -1 24502 25011
YP_007112435.1 NC_019721_p18 tail assembly protein phrog_32 tail assembly protein tail 1 13517 14107
YP_007112465.1 NC_019721_p48 holin phrog_198 holin lysis 1 34462 34857
YP_007112458.1 NC_019721_p41 hypothetical protein phrog_1170 unknown function unknown function 1 29968 30306
YP_007112420.1 NC_019721_p3 portal protein phrog_12 portal protein head and packaging 1 2007 3281
YP_007112439.1 NC_019721_p22 Cor protein phrog_1119 Cor superinfection exclusion protein moron, auxiliary metabolic gene and host takeover 1 18701 18934
YP_007112433.1 NC_019721_p16 minor tail protein phrog_30 minor tail protein tail 1 12310 13020
YP_007112473.1 NC_019721_p56 hypothetical protein phrog_854 glucosyltransferase moron, auxiliary metabolic gene and host takeover 1 38715 39305
YP_007112460.1 NC_019721_p43 hypothetical protein phrog_362 transcriptional repressor transcription regulation 1 31266 31586
YP_007112470.1 NC_019721_p53 hypothetical protein phrog_9518 unknown function unknown function 1 36205 36402
YP_007112451.1 NC_019721_p34 hypothetical protein phrog_1033 ParB-like partition protein DNA, RNA and nucleotide metabolism -1 25651 26685
YP_007112468.1 NC_019721_p51 hypothetical protein phrog_1026 Rz-like spanin lysis 1 35759 36034
YP_007112455.1 NC_019721_p38 prophage anti-repressor phrog_35 transcriptional repressor transcription regulation 1 28696 28926
YP_007112461.1 NC_019721_p44 holliday-junction resolvase RusA phrog_34 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 31583 31972
YP_007112419.1 NC_019721_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 493 2007
YP_007112421.1 NC_019721_p4 head maturation protease phrog_80 head maturation protease head and packaging 1 3299 3976
YP_007112467.1 NC_019721_p50 lysin phrog_181 endolysin lysis 1 35125 35751
YP_007112450.1 NC_019721_p33 hypothetical protein phrog_9763 unknown function unknown function -1 25008 25664
YP_007112426.1 NC_019721_p9 hypothetical protein phrog_347 tail terminator connector 1 6277 6624
YP_007112452.1 NC_019721_p35 hypothetical protein phrog_14171 unknown function unknown function -1 26685 27191
YP_007112453.1 NC_019721_p36 hypothetical protein singleton unknown function unknown function -1 27501 27743
YP_007112444.1 NC_019721_p27 integrase phrog_1 integrase integration and excision -1 21664 22674
YP_007112429.1 NC_019721_p12 hypothetical protein phrog_337 tail protein tail 1 7630 7893
YP_007112438.1 NC_019721_p21 hypothetical protein phrog_425 membrane associated protein moron, auxiliary metabolic gene and host takeover 1 17912 18589
YP_007112456.1 NC_019721_p39 hypothetical protein singleton unknown function unknown function 1 28963 29418
YP_007112425.1 NC_019721_p8 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 5831 6280