| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_019724 |
Definition |
Enterobacteria phage HK578, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Dhillonvirus. |
DB of origin |
REFSEQ |
Length |
43741 |
Host Name |
Escherichia coli |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
60 |
%GC |
54.48 |
Number of singletons |
3 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_007112656.1 | NC_019724_p49 | hypothetical protein | phrog_9839 | unknown function | unknown function | 1 | 38931 | 39236 |
| YP_007112615.1 | NC_019724_p8 | major head protein | phrog_247 | major head protein | head and packaging | 1 | 6442 | 7542 |
| YP_007112636.1 | NC_019724_p29 | hypothetical protein | phrog_10685 | unknown function | unknown function | -1 | 25190 | 25414 |
| YP_007112655.1 | NC_019724_p48 | hypothetical protein | phrog_3623 | unknown function | unknown function | 1 | 38755 | 38934 |
| YP_007112621.1 | NC_019724_p14 | tail protein | phrog_584 | major tail protein | tail | 1 | 9638 | 10363 |
| YP_007112666.1 | NC_019724_p59 | hypothetical protein | phrog_704 | DNA repair exonuclease | DNA, RNA and nucleotide metabolism | 1 | 42294 | 43436 |
| YP_007112649.1 | NC_019724_p42 | hypothetical protein | phrog_9934 | unknown function | unknown function | -1 | 34261 | 34440 |
| YP_007112635.1 | NC_019724_p28 | hypothetical protein | phrog_415 | polynucleotide kinase | other | -1 | 24723 | 25193 |
| YP_007112645.1 | NC_019724_p38 | hypothetical protein | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 29490 | 31781 |
| YP_007112634.1 | NC_019724_p27 | hypothetical protein | phrog_9871 | unknown function | unknown function | -1 | 24116 | 24658 |
| YP_007112626.1 | NC_019724_p19 | minor tail protein | phrog_18 | minor tail protein | tail | 1 | 14777 | 15565 |
| YP_007112642.1 | NC_019724_p35 | hypothetical protein | phrog_5558 | Lar-like restriction alleviation protein | moron, auxiliary metabolic gene and host takeover | -1 | 28664 | 28837 |
| YP_007112659.1 | NC_019724_p52 | hypothetical protein | phrog_10243 | unknown function | unknown function | 1 | 39642 | 40166 |
| YP_007112641.1 | NC_019724_p34 | hypothetical protein | phrog_9291 | unknown function | unknown function | -1 | 28402 | 28620 |
| YP_007112644.1 | NC_019724_p37 | hypothetical protein | phrog_1365 | unknown function | unknown function | -1 | 29153 | 29485 |
| YP_007112609.1 | NC_019724_p2 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 573 | 1958 |
| YP_007112628.1 | NC_019724_p21 | tail assembly protein | phrog_32 | tail assembly protein | tail | 1 | 16299 | 16916 |
| YP_007112643.1 | NC_019724_p36 | hypothetical protein | phrog_93 | endonuclease | DNA, RNA and nucleotide metabolism | -1 | 28878 | 29156 |
| YP_007112630.1 | NC_019724_p23 | hypothetical protein | phrog_1265 | membrane protein | moron, auxiliary metabolic gene and host takeover | -1 | 20388 | 21320 |
| YP_007112610.1 | NC_019724_p3 | hypothetical protein | phrog_145 | portal protein | head and packaging | 1 | 1970 | 3490 |
| YP_007112627.1 | NC_019724_p20 | tail component protein | phrog_30 | minor tail protein | tail | 1 | 15568 | 16308 |
| YP_007112665.1 | NC_019724_p58 | hypothetical protein | phrog_215 | structural protein with Ig domain | head and packaging | 1 | 41655 | 42056 |
| YP_007112631.1 | NC_019724_p24 | hypothetical protein | phrog_4281 | unknown function | unknown function | -1 | 21320 | 21550 |
| YP_007112611.1 | NC_019724_p4 | head morphogenesis protein | phrog_241 | head morphogenesis | head and packaging | 1 | 3474 | 4577 |
| YP_007112650.1 | NC_019724_p43 | hypothetical protein | phrog_4965 | unknown function | unknown function | -1 | 34440 | 34691 |
| YP_007112648.1 | NC_019724_p41 | hypothetical protein | phrog_69 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 32834 | 34261 |
| YP_007112637.1 | NC_019724_p30 | DNA N-6-adenine-methyltransferase | phrog_111 | DNA methyltransferase | other | -1 | 25395 | 25880 |
| YP_007112660.1 | NC_019724_p53 | hypothetical protein | phrog_13628 | unknown function | unknown function | 1 | 40163 | 40303 |
| YP_007112651.1 | NC_019724_p44 | hypothetical protein | phrog_3127 | unknown function | unknown function | -1 | 34740 | 35171 |
| YP_007112633.1 | NC_019724_p26 | hypothetical protein | phrog_10558 | unknown function | unknown function | -1 | 23498 | 24073 |
| YP_007112620.1 | NC_019724_p13 | hypothetical protein | phrog_179 | tail terminator | connector | 1 | 9154 | 9576 |
| YP_007112612.1 | NC_019724_p5 | hypothetical protein | phrog_2536 | Rz-like spanin | lysis | 1 | 4570 | 4899 |
| YP_007112664.1 | NC_019724_p57 | lysozyme | phrog_7 | endolysin | lysis | 1 | 41147 | 41638 |
| YP_007112646.1 | NC_019724_p39 | hypothetical protein | phrog_10102 | unknown function | unknown function | -1 | 31778 | 31948 |
| YP_007112608.1 | NC_019724_p1 | terminase small subunit | phrog_3064 | terminase | head and packaging | 1 | 1 | 573 |
| YP_007112618.1 | NC_019724_p11 | hypothetical protein | phrog_161 | head closure Hc1 | connector | 1 | 8206 | 8559 |
| YP_007112624.1 | NC_019724_p17 | tail length tape measure protein | phrog_24 | tail length tape measure protein | tail | 1 | 11504 | 14146 |
| YP_007112619.1 | NC_019724_p12 | hypothetical protein | phrog_169 | tail completion or Neck1 protein | connector | 1 | 8561 | 9154 |
| YP_007112613.1 | NC_019724_p6 | hypothetical protein | singleton | unknown function | unknown function | -1 | 5078 | 5500 |
| YP_007112652.1 | NC_019724_p45 | hypothetical protein | phrog_9366 | transposase | integration and excision | 1 | 35575 | 36003 |
| YP_007112625.1 | NC_019724_p18 | minor tail protein | phrog_9922 | minor tail protein | tail | 1 | 14181 | 14780 |
| YP_007112629.1 | NC_019724_p22 | bacteriophage host specificity protein | phrog_31 | central tail fiber J | tail | 1 | 16913 | 20365 |
| YP_007112632.1 | NC_019724_p25 | tail fiber | phrog_1980 | tail fiber protein | tail | 1 | 21631 | 23472 |
| YP_007112640.1 | NC_019724_p33 | hypothetical protein | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 26973 | 28397 |
| YP_007112647.1 | NC_019724_p40 | hypothetical protein | phrog_112 | Gp2.5-like ssDNA binding protein and ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 32007 | 32744 |
| YP_007112614.1 | NC_019724_p7 | hypothetical protein | phrog_206 | head scaffolding protein | head and packaging | 1 | 5640 | 6344 |
| YP_007112622.1 | NC_019724_p15 | hypothetical protein | phrog_569 | tail length tape measure protein | tail | 1 | 10433 | 10795 |
| YP_007112663.1 | NC_019724_p56 | hypothetical protein | phrog_2508 | holin | lysis | 1 | 40915 | 41160 |
| YP_007112639.1 | NC_019724_p32 | hypothetical protein | phrog_757 | DNA methyltransferase | other | -1 | 26281 | 26976 |
| YP_007112654.1 | NC_019724_p47 | hypothetical protein | singleton | unknown function | unknown function | -1 | 38600 | 38704 |
| YP_007112661.1 | NC_019724_p54 | hypothetical protein | phrog_2531 | unknown function | unknown function | 1 | 40276 | 40575 |
| YP_007112616.1 | NC_019724_p9 | hypothetical protein | phrog_477 | head-tail adaptor Ad1 | connector | 1 | 7571 | 8101 |
| YP_007112653.1 | NC_019724_p46 | hypothetical protein | phrog_3228 | replicative helicase-primase | DNA, RNA and nucleotide metabolism | 1 | 36014 | 38275 |
| YP_007112662.1 | NC_019724_p55 | hypothetical protein | phrog_2359 | holin | lysis | 1 | 40628 | 40918 |
| YP_007112657.1 | NC_019724_p50 | hypothetical protein | phrog_12533 | unknown function | unknown function | 1 | 39246 | 39515 |
| YP_007112623.1 | NC_019724_p16 | hypothetical protein | phrog_680 | tail length tape measure protein | tail | 1 | 10795 | 11109 |
| YP_007112638.1 | NC_019724_p31 | hypothetical protein | phrog_99 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 25961 | 26284 |
| YP_007112667.1 | NC_019724_p60 | hypothetical protein | phrog_20931 | unknown function | unknown function | 1 | 43451 | 43645 |
| YP_007112658.1 | NC_019724_p51 | hypothetical protein | singleton | unknown function | unknown function | 1 | 39553 | 39645 |
| YP_007112617.1 | NC_019724_p10 | hypothetical protein | phrog_11158 | unknown function | unknown function | 1 | 8103 | 8219 |