Genomic map of Escherichia phage HK578 (NC_019724)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_019724
Definition
Enterobacteria phage HK578, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Dhillonvirus.
DB of origin
REFSEQ
Length
43741
Host Name
Escherichia coli
Host domain
Bacteria
Is prophage?
undef
Number of proteins
60
%GC
54.48
Number of singletons
3
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_007112656.1 NC_019724_p49 hypothetical protein phrog_9839 unknown function unknown function 1 38931 39236
YP_007112615.1 NC_019724_p8 major head protein phrog_247 major head protein head and packaging 1 6442 7542
YP_007112636.1 NC_019724_p29 hypothetical protein phrog_10685 unknown function unknown function -1 25190 25414
YP_007112655.1 NC_019724_p48 hypothetical protein phrog_3623 unknown function unknown function 1 38755 38934
YP_007112621.1 NC_019724_p14 tail protein phrog_584 major tail protein tail 1 9638 10363
YP_007112666.1 NC_019724_p59 hypothetical protein phrog_704 DNA repair exonuclease DNA, RNA and nucleotide metabolism 1 42294 43436
YP_007112649.1 NC_019724_p42 hypothetical protein phrog_9934 unknown function unknown function -1 34261 34440
YP_007112635.1 NC_019724_p28 hypothetical protein phrog_415 polynucleotide kinase other -1 24723 25193
YP_007112645.1 NC_019724_p38 hypothetical protein phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 29490 31781
YP_007112634.1 NC_019724_p27 hypothetical protein phrog_9871 unknown function unknown function -1 24116 24658
YP_007112626.1 NC_019724_p19 minor tail protein phrog_18 minor tail protein tail 1 14777 15565
YP_007112642.1 NC_019724_p35 hypothetical protein phrog_5558 Lar-like restriction alleviation protein moron, auxiliary metabolic gene and host takeover -1 28664 28837
YP_007112659.1 NC_019724_p52 hypothetical protein phrog_10243 unknown function unknown function 1 39642 40166
YP_007112641.1 NC_019724_p34 hypothetical protein phrog_9291 unknown function unknown function -1 28402 28620
YP_007112644.1 NC_019724_p37 hypothetical protein phrog_1365 unknown function unknown function -1 29153 29485
YP_007112609.1 NC_019724_p2 terminase large subunit phrog_2 terminase large subunit head and packaging 1 573 1958
YP_007112628.1 NC_019724_p21 tail assembly protein phrog_32 tail assembly protein tail 1 16299 16916
YP_007112643.1 NC_019724_p36 hypothetical protein phrog_93 endonuclease DNA, RNA and nucleotide metabolism -1 28878 29156
YP_007112630.1 NC_019724_p23 hypothetical protein phrog_1265 membrane protein moron, auxiliary metabolic gene and host takeover -1 20388 21320
YP_007112610.1 NC_019724_p3 hypothetical protein phrog_145 portal protein head and packaging 1 1970 3490
YP_007112627.1 NC_019724_p20 tail component protein phrog_30 minor tail protein tail 1 15568 16308
YP_007112665.1 NC_019724_p58 hypothetical protein phrog_215 structural protein with Ig domain head and packaging 1 41655 42056
YP_007112631.1 NC_019724_p24 hypothetical protein phrog_4281 unknown function unknown function -1 21320 21550
YP_007112611.1 NC_019724_p4 head morphogenesis protein phrog_241 head morphogenesis head and packaging 1 3474 4577
YP_007112650.1 NC_019724_p43 hypothetical protein phrog_4965 unknown function unknown function -1 34440 34691
YP_007112648.1 NC_019724_p41 hypothetical protein phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 32834 34261
YP_007112637.1 NC_019724_p30 DNA N-6-adenine-methyltransferase phrog_111 DNA methyltransferase other -1 25395 25880
YP_007112660.1 NC_019724_p53 hypothetical protein phrog_13628 unknown function unknown function 1 40163 40303
YP_007112651.1 NC_019724_p44 hypothetical protein phrog_3127 unknown function unknown function -1 34740 35171
YP_007112633.1 NC_019724_p26 hypothetical protein phrog_10558 unknown function unknown function -1 23498 24073
YP_007112620.1 NC_019724_p13 hypothetical protein phrog_179 tail terminator connector 1 9154 9576
YP_007112612.1 NC_019724_p5 hypothetical protein phrog_2536 Rz-like spanin lysis 1 4570 4899
YP_007112664.1 NC_019724_p57 lysozyme phrog_7 endolysin lysis 1 41147 41638
YP_007112646.1 NC_019724_p39 hypothetical protein phrog_10102 unknown function unknown function -1 31778 31948
YP_007112608.1 NC_019724_p1 terminase small subunit phrog_3064 terminase head and packaging 1 1 573
YP_007112618.1 NC_019724_p11 hypothetical protein phrog_161 head closure Hc1 connector 1 8206 8559
YP_007112624.1 NC_019724_p17 tail length tape measure protein phrog_24 tail length tape measure protein tail 1 11504 14146
YP_007112619.1 NC_019724_p12 hypothetical protein phrog_169 tail completion or Neck1 protein connector 1 8561 9154
YP_007112613.1 NC_019724_p6 hypothetical protein singleton unknown function unknown function -1 5078 5500
YP_007112652.1 NC_019724_p45 hypothetical protein phrog_9366 transposase integration and excision 1 35575 36003
YP_007112625.1 NC_019724_p18 minor tail protein phrog_9922 minor tail protein tail 1 14181 14780
YP_007112629.1 NC_019724_p22 bacteriophage host specificity protein phrog_31 central tail fiber J tail 1 16913 20365
YP_007112632.1 NC_019724_p25 tail fiber phrog_1980 tail fiber protein tail 1 21631 23472
YP_007112640.1 NC_019724_p33 hypothetical protein phrog_62 DNA helicase DNA, RNA and nucleotide metabolism -1 26973 28397
YP_007112647.1 NC_019724_p40 hypothetical protein phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 32007 32744
YP_007112614.1 NC_019724_p7 hypothetical protein phrog_206 head scaffolding protein head and packaging 1 5640 6344
YP_007112622.1 NC_019724_p15 hypothetical protein phrog_569 tail length tape measure protein tail 1 10433 10795
YP_007112663.1 NC_019724_p56 hypothetical protein phrog_2508 holin lysis 1 40915 41160
YP_007112639.1 NC_019724_p32 hypothetical protein phrog_757 DNA methyltransferase other -1 26281 26976
YP_007112654.1 NC_019724_p47 hypothetical protein singleton unknown function unknown function -1 38600 38704
YP_007112661.1 NC_019724_p54 hypothetical protein phrog_2531 unknown function unknown function 1 40276 40575
YP_007112616.1 NC_019724_p9 hypothetical protein phrog_477 head-tail adaptor Ad1 connector 1 7571 8101
YP_007112653.1 NC_019724_p46 hypothetical protein phrog_3228 replicative helicase-primase DNA, RNA and nucleotide metabolism 1 36014 38275
YP_007112662.1 NC_019724_p55 hypothetical protein phrog_2359 holin lysis 1 40628 40918
YP_007112657.1 NC_019724_p50 hypothetical protein phrog_12533 unknown function unknown function 1 39246 39515
YP_007112623.1 NC_019724_p16 hypothetical protein phrog_680 tail length tape measure protein tail 1 10795 11109
YP_007112638.1 NC_019724_p31 hypothetical protein phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism -1 25961 26284
YP_007112667.1 NC_019724_p60 hypothetical protein phrog_20931 unknown function unknown function 1 43451 43645
YP_007112658.1 NC_019724_p51 hypothetical protein singleton unknown function unknown function 1 39553 39645
YP_007112617.1 NC_019724_p10 hypothetical protein phrog_11158 unknown function unknown function 1 8103 8219