Genomic map of Lactobacillus phage phiAQ113 (NC_019782)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_019782
Definition
Lactobacillus phage AQ113, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
DB of origin
REFSEQ
Length
36566
Host Name
Lactobacillus
Host domain
Bacteria
Is prophage?
undef
Number of proteins
56
%GC
36.52
Number of singletons
8
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_007173653.1 NC_019782_p55 phage transcriptional regulator, ArpU family phrog_248 transcriptional activator transcription regulation 1 35692 36132
YP_007173623.1 NC_019782_p25 hypothetical protein phrog_12519 unknown function unknown function 1 17301 19031
YP_007173611.1 NC_019782_p13 hypothetical protein phrog_966 unknown function unknown function 1 7229 7432
YP_007173614.1 NC_019782_p16 phage XkdN-like protein phrog_389 tail protein XkdN-like tail 1 9393 9809
YP_007173615.1 NC_019782_p17 tape measure protein phrog_58 tail length tape measure protein tail 1 10058 12304
YP_007173642.1 NC_019782_p44 hypothetical protein phrog_7634 unknown function unknown function 1 30112 30399
YP_007173613.1 NC_019782_p15 sheat tail protein phrog_365 tail protein tail 1 8908 9381
YP_007173603.1 NC_019782_p5 portal protein phrog_64 portal protein head and packaging 1 2479 3615
YP_007173643.1 NC_019782_p45 ERF Recombinase phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 30399 31043
YP_007173610.1 NC_019782_p12 hypothetical protein phrog_525 unknown function unknown function 1 6835 7260
YP_007173625.1 NC_019782_p27 phage related protein phrog_8791 unknown function unknown function 1 19496 20092
YP_007173618.1 NC_019782_p20 phage late control gene D protein GPD phrog_400 tail protein tail 1 13595 14662
YP_007173609.1 NC_019782_p11 hypothetical protein singleton unknown function unknown function 1 6310 6492
YP_007173651.1 NC_019782_p53 phage protein-Restriction nuclease superfamily phrog_93 endonuclease DNA, RNA and nucleotide metabolism 1 34941 35324
YP_007173647.1 NC_019782_p49 single-strand DNA binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 33516 33941
YP_007173645.1 NC_019782_p47 DNA replication protein phrog_50 DnaC-like helicase loader DNA, RNA and nucleotide metabolism 1 31925 32725
YP_007173641.1 NC_019782_p43 prophage protein phrog_25327 unknown function unknown function 1 29730 30101
YP_007173649.1 NC_019782_p51 hypothetical protein phrog_30614 unknown function unknown function 1 34490 34663
YP_007173630.1 NC_019782_p32 endolysin phrog_291 endolysin lysis 1 21514 22689
YP_007173650.1 NC_019782_p52 hypothetical protein phrog_3999 unknown function unknown function 1 34679 34969
YP_007173624.1 NC_019782_p26 hypothetical protein phrog_21569 unknown function unknown function 1 19047 19430
YP_007173606.1 NC_019782_p8 phage minor structural protein GP20 phrog_194 head scaffolding protein head and packaging 1 4294 4833
YP_007173629.1 NC_019782_p31 hypothetical protein phrog_8444 unknown function unknown function 1 21116 21505
YP_007173636.1 NC_019782_p38 Cro-like protein phage associated phrog_3 transcriptional repressor transcription regulation 1 27531 27746
YP_007173637.1 NC_019782_p39 prophage antirepressor phrog_130 anti-repressor Ant transcription regulation 1 27851 28639
YP_007173601.1 NC_019782_p3 phage terminase large subunit B singleton unknown function unknown function 1 1365 1775
YP_007173627.1 NC_019782_p29 hypothetical protein phrog_3671 unknown function unknown function 1 20687 20896
YP_007173600.1 NC_019782_p2 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 600 1232
YP_007173638.1 NC_019782_p40 hypothetical protein phrog_35633 unknown function unknown function 1 28795 28974
YP_007173640.1 NC_019782_p42 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 29195 29725
YP_007173628.1 NC_019782_p30 hypothetical protein phrog_13165 unknown function unknown function 1 20880 21107
YP_007173648.1 NC_019782_p50 hypothetical protein phrog_30848 unknown function unknown function 1 34001 34471
YP_007173612.1 NC_019782_p14 phage sheath tail protein phrog_279 tail sheath tail 1 7436 8896
YP_007173607.1 NC_019782_p9 phage major capsid protein phrog_422 major head protein head and packaging 1 4848 5924
YP_007173622.1 NC_019782_p24 hypothetical protein phrog_521 tail protein tail 1 16546 17115
YP_007173654.1 NC_019782_p56 hypothetical protein singleton unknown function unknown function 1 36372 36521
YP_007173634.1 NC_019782_p36 phosphoadenosine phosphosulfate reductase phrog_2302 phosphoadenosine phosphosulfate reductase moron, auxiliary metabolic gene and host takeover 1 25079 26380
YP_007173626.1 NC_019782_p28 hypothetical protein phrog_134 unknown function unknown function 1 20106 20294
YP_007173632.1 NC_019782_p34 hypothetical protein singleton unknown function unknown function 1 23610 23939
YP_007173604.1 NC_019782_p6 minor head protein singleton unknown function unknown function 1 3651 3986
YP_007173644.1 NC_019782_p46 DNA replication protein phrog_1163 unknown function unknown function 1 31054 31890
YP_007173602.1 NC_019782_p4 phage terminase large subunit B phrog_5653 terminase large subunit head and packaging 1 1929 2528
YP_007173635.1 NC_019782_p37 co-activator of prophage gene expression phrog_2159 ParB-like partition protein DNA, RNA and nucleotide metabolism 1 26286 26876
YP_007173616.1 NC_019782_p18 minor tail protein gp26-like singleton unknown function unknown function 1 12421 12894
YP_007173652.1 NC_019782_p54 hypothetical protein singleton unknown function unknown function 1 35431 35574
YP_007173639.1 NC_019782_p41 hypothetical protein phrog_35091 unknown function unknown function 1 28988 29149
YP_007173599.1 NC_019782_p1 phage terminase small subunit phrog_7344 terminase small subunit head and packaging 1 1 489
YP_007173631.1 NC_019782_p33 hypothetical protein phrog_711 unknown function unknown function 1 22909 23610
YP_007173621.1 NC_019782_p23 baseplate J-like protein phrog_6 baseplate wedge subunit tail 1 15408 16553
YP_007173619.1 NC_019782_p21 hypothetical protein phrog_579 unknown function unknown function 1 14635 14979
YP_007173608.1 NC_019782_p10 hypothetical protein phrog_132 head-tail adaptor connector 1 5942 6313
YP_007173633.1 NC_019782_p35 hypothetical protein phrog_62 DNA helicase DNA, RNA and nucleotide metabolism 1 23920 25089
YP_007173605.1 NC_019782_p7 hypothetical protein singleton unknown function unknown function 1 3997 4185
YP_007173620.1 NC_019782_p22 phage protein DUF2634 superfamily phrog_120 baseplate wedge subunit tail 1 15005 15418
YP_007173617.1 NC_019782_p19 LysM-like protein phrog_380 endolysin lysis 1 12901 13602
YP_007173646.1 NC_019782_p48 transcriptional regulator phrog_8 transcriptional regulator transcription regulation 1 32727 33083