functional categories (each PHROG annotation is associated to a category) | Notes | ||
head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
tail | lysis | other | - Scroll to zoom |
unknown function | - Click on a protein to see its PHROG |
Locus |
NC_019813 |
Definition |
Pseudomonas phage vB_PaeP_p2-10_Or1, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Bruynoghevirus; unclassified Bruynoghevirus. |
DB of origin |
REFSEQ |
Length |
44030 |
Host Name |
Pseudomonas aeruginosa |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
58 |
%GC |
51.99 |
Number of singletons |
0 |
Number of paralogs |
1 |
NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
---|---|---|---|---|---|---|---|---|
YP_007183255.1 | NC_019813_p47 | hypothetical protein | phrog_7973 | unknown function | unknown function | -1 | 36524 | 37657 |
YP_007183220.1 | NC_019813_p12 | constituent protein | phrog_3287 | virion structural protein | head and packaging | 1 | 9552 | 11105 |
YP_007183211.1 | NC_019813_p3 | terminase | phrog_2 | terminase large subunit | head and packaging | 1 | 1700 | 3148 |
YP_007183265.1 | NC_019813_p57 | hypothetical protein | phrog_1448 | unknown function | unknown function | -1 | 42158 | 42640 |
YP_007183215.1 | NC_019813_p7 | hypothetical protein | phrog_3982 | unknown function | unknown function | 1 | 7535 | 7855 |
YP_007183250.1 | NC_019813_p42 | hypothetical protein | phrog_2599 | ribosomal protein S6 glutaminyl transferase | moron, auxiliary metabolic gene and host takeover | -1 | 31123 | 32013 |
YP_007183228.1 | NC_019813_p20 | hypothetical protein | phrog_8259 | unknown function | unknown function | 1 | 19325 | 19681 |
YP_007183233.1 | NC_019813_p25 | constituent protein | phrog_221 | metallo-phosphoesterase | other | -1 | 20722 | 21483 |
YP_007183257.1 | NC_019813_p49 | hypothetical protein | phrog_14798 | unknown function | unknown function | -1 | 38550 | 38879 |
YP_007183210.1 | NC_019813_p2 | lysozyme | phrog_7 | endolysin | lysis | 1 | 1203 | 1700 |
YP_007183223.1 | NC_019813_p15 | hypothetical protein | phrog_7477 | unknown function | unknown function | 1 | 12203 | 13147 |
YP_007183256.1 | NC_019813_p48 | hypothetical protein | phrog_9504 | unknown function | unknown function | -1 | 37474 | 38598 |
YP_007183262.1 | NC_019813_p54 | hypothetical protein | phrog_11608 | unknown function | unknown function | -1 | 40361 | 40693 |
YP_007183221.1 | NC_019813_p13 | constituent protein | phrog_8092 | unknown function | unknown function | 1 | 11051 | 11791 |
YP_007183217.1 | NC_019813_p9 | hypothetical protein | phrog_22224 | unknown function | unknown function | 1 | 8327 | 8686 |
YP_007183253.1 | NC_019813_p45 | hypothetical protein | phrog_4877 | unknown function | unknown function | -1 | 35136 | 35714 |
YP_007183226.1 | NC_019813_p18 | constituent protein | phrog_6958 | virion structural protein | head and packaging | 1 | 15214 | 18384 |
YP_007183243.1 | NC_019813_p35 | hypothetical protein | phrog_9555 | unknown function | unknown function | -1 | 27516 | 27680 |
YP_007183229.1 | NC_019813_p21 | hypothetical protein | phrog_12822 | unknown function | unknown function | -1 | 19730 | 20032 |
YP_007183248.1 | NC_019813_p40 | hypothetical protein | phrog_8197 | unknown function | unknown function | -1 | 30375 | 30737 |
YP_007183235.1 | NC_019813_p27 | hypothetical protein | phrog_7967 | unknown function | unknown function | -1 | 21678 | 22658 |
YP_007183224.1 | NC_019813_p16 | hypothetical protein | phrog_9927 | virion structural protein | head and packaging | 1 | 13147 | 13530 |
YP_007183242.1 | NC_019813_p34 | hypothetical protein | phrog_7819 | tail length tape measure protein | tail | -1 | 26717 | 27406 |
YP_007183230.1 | NC_019813_p22 | hypothetical protein | phrog_8402 | unknown function | unknown function | -1 | 20102 | 20353 |
YP_007183219.1 | NC_019813_p11 | hypothetical protein | phrog_5795 | tail protein | tail | 1 | 8908 | 9555 |
YP_007183216.1 | NC_019813_p8 | constituent protein | phrog_2941 | virion structural protein | head and packaging | 1 | 7858 | 8484 |
YP_007183222.1 | NC_019813_p14 | hypothetical protein | phrog_7642 | unknown function | unknown function | 1 | 11788 | 12222 |
YP_007183254.1 | NC_019813_p46 | hypothetical protein | phrog_3815 | COOH.NH2 ligase | other | -1 | 35707 | 36513 |
YP_007183258.1 | NC_019813_p50 | hypothetical protein | phrog_20462 | unknown function | unknown function | -1 | 38886 | 39338 |
YP_007183247.1 | NC_019813_p39 | primase/helicase | phrog_239 | DNA primase/helicase | DNA, RNA and nucleotide metabolism | -1 | 28665 | 30374 |
YP_007183227.1 | NC_019813_p19 | hypothetical protein | phrog_8295 | virion structural protein | head and packaging | 1 | 18218 | 19282 |
YP_007183214.1 | NC_019813_p6 | major head protein | phrog_1328 | major head protein | head and packaging | 1 | 6534 | 7487 |
YP_007183218.1 | NC_019813_p10 | hypothetical protein | phrog_8140 | unknown function | unknown function | 1 | 8670 | 8918 |
YP_007183263.1 | NC_019813_p55 | hypothetical protein | phrog_9861 | unknown function | unknown function | -1 | 40624 | 40977 |
YP_007183259.1 | NC_019813_p51 | hypothetical protein | phrog_11110 | unknown function | unknown function | -1 | 39328 | 39555 |
YP_007183212.1 | NC_019813_p4 | portal protein | phrog_1216 | portal protein | head and packaging | 1 | 3149 | 5266 |
YP_007183209.1 | NC_019813_p1 | hypothetical protein | phrog_51 | terminase small subunit | head and packaging | 1 | 812 | 1270 |
YP_007183266.1 | NC_019813_p58 | hypothetical protein | phrog_14276 | unknown function | unknown function | -1 | 42651 | 42956 |
YP_007183234.1 | NC_019813_p26 | hypothetical protein | phrog_945 | endonuclease | DNA, RNA and nucleotide metabolism | -1 | 21476 | 21916 |
YP_007183246.1 | NC_019813_p38 | DNA polymerase2 | phrog_403 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | -1 | 28175 | 28702 |
YP_007183238.1 | NC_019813_p30 | hypothetical protein | phrog_5033 | endolysin; inhibits RNA polymerase | lysis | -1 | 23766 | 24401 |
YP_007183249.1 | NC_019813_p41 | hypothetical protein | phrog_2520 | gamma-glutamyl cyclotransferase | moron, auxiliary metabolic gene and host takeover | -1 | 30734 | 31126 |
YP_007183231.1 | NC_019813_p23 | hypothetical protein | phrog_2251 | unknown function | unknown function | -1 | 20295 | 20504 |
YP_007183213.1 | NC_019813_p5 | scaffold protein | phrog_3927 | head scaffolding protein | head and packaging | 1 | 5511 | 6515 |
YP_007183236.1 | NC_019813_p28 | exonuclease | phrog_107 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 22633 | 23574 |
YP_007183260.1 | NC_019813_p52 | hypothetical protein | phrog_8299 | unknown function | unknown function | -1 | 39682 | 40092 |
YP_007183239.1 | NC_019813_p31 | hypothetical protein | phrog_112 | Gp2.5-like ssDNA binding protein and ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 24247 | 24807 |
YP_007183245.1 | NC_019813_p37 | hypothetical protein | phrog_11010 | unknown function | unknown function | -1 | 27893 | 28123 |
YP_007183252.1 | NC_019813_p44 | L-gluamine-D-fructose-6-phosphate aminotransferase | phrog_7631 | amidoligase enzyme | other | -1 | 33934 | 35157 |
YP_007183237.1 | NC_019813_p29 | hypothetical protein | phrog_8565 | unknown function | unknown function | -1 | 23501 | 23794 |
YP_007183251.1 | NC_019813_p43 | hypothetical protein | phrog_4736 | L-glutamine-D-fructose-6-phosphate aminotransferase | other | -1 | 32368 | 33921 |
YP_007183232.1 | NC_019813_p24 | hypothetical protein | phrog_9960 | unknown function | unknown function | -1 | 20507 | 20662 |
YP_007183241.1 | NC_019813_p33 | hypothetical protein | phrog_9754 | unknown function | unknown function | -1 | 26515 | 26787 |
YP_007183225.1 | NC_019813_p17 | hypothetical protein | phrog_7725 | virion structural protein | head and packaging | 1 | 13520 | 15058 |
YP_007183244.1 | NC_019813_p36 | hypothetical protein | phrog_9813 | unknown function | unknown function | -1 | 27670 | 27861 |
YP_007183240.1 | NC_019813_p32 | DNA polymerase1 | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 24877 | 26496 |
YP_007183261.1 | NC_019813_p53 | hypothetical protein | phrog_11608 | unknown function | unknown function | -1 | 40089 | 40496 |
YP_007183264.1 | NC_019813_p56 | hypothetical protein | phrog_9596 | unknown function | unknown function | -1 | 41867 | 42100 |