Genomic map of Staphylococcus phage StB27 (NC_019914)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_019914
Definition
Staphylococcus phage StB27, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
40071
Host Name
Staphylococcus hominis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
53
%GC
33.21
Number of singletons
2
Number of paralogs
3

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_007236580.1 NC_019914_p12 hypothetical protein phrog_3119 unknown function unknown function 1 6395 6625
YP_007236604.1 NC_019914_p36 minor head protein phrog_348 minor head protein head and packaging 1 22222 22536
YP_007236574.1 NC_019914_p6 transcriptional regulator phrog_3 transcriptional repressor transcription regulation 1 4537 4728
YP_007236618.1 NC_019914_p50 hypothetical protein phrog_1766 tail fiber protein tail 1 37406 37702
YP_007236616.1 NC_019914_p48 peptidoglycan hydrolase phrog_759 tail associated cell-wall hydrolase other 1 34009 35946
YP_007236620.1 NC_019914_p52 holin phrog_297 holin lysis 1 37894 38181
YP_007236619.1 NC_019914_p51 hypothetical protein phrog_134 unknown function unknown function 1 37695 37838
YP_007236573.1 NC_019914_p5 transcriptional regulator phrog_8 transcriptional regulator transcription regulation -1 4044 4313
YP_007236609.1 NC_019914_p41 hypothetical protein phrog_441 tail assembly chaperone tail 1 24366 24731
YP_007236585.1 NC_019914_p17 DNA single-strand binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 10803 11267
YP_007236588.1 NC_019914_p20 DNA replication protein phrog_186 DnaD-like helicase loader DNA, RNA and nucleotide metabolism 1 11714 12601
YP_007236590.1 NC_019914_p22 hypothetical protein phrog_8653 unknown function unknown function 1 12964 13209
YP_007236610.1 NC_019914_p42 tail tape measure protein phrog_58 tail length tape measure protein tail 1 24731 28123
YP_007236607.1 NC_019914_p39 major tail protein phrog_238 major tail protein tail 1 23297 23896
YP_007236594.1 NC_019914_p26 Holliday junction-specific endonuclease RecU phrog_843 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 14167 14664
YP_007236582.1 NC_019914_p14 DNA single-strand binding protein phrog_148 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 8608 9498
YP_007236605.1 NC_019914_p37 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 22526 22876
YP_007236615.1 NC_019914_p47 holin phrog_199 holin lysis 1 33468 33959
YP_007236577.1 NC_019914_p9 hypothetical protein singleton unknown function unknown function 1 5621 5839
YP_007236592.1 NC_019914_p24 RinB phrog_152 RinB-like transcriptional activator transcription regulation 1 13486 13653
YP_007236583.1 NC_019914_p15 hypothetical protein phrog_392 metal-dependent hydrolase other 1 9710 10201
YP_007236602.1 NC_019914_p34 major head protein phrog_544 major head protein head and packaging 1 20951 21862
YP_007236578.1 NC_019914_p10 hypothetical protein phrog_369 unknown function unknown function 1 5852 6022
YP_007236617.1 NC_019914_p49 tail protein phrog_257 minor tail protein tail 1 35999 37345
YP_007236584.1 NC_019914_p16 hypothetical protein phrog_19181 unknown function unknown function 1 10198 10791
YP_007236598.1 NC_019914_p30 TerL phrog_2 terminase large subunit head and packaging 1 16482 17621
YP_007236591.1 NC_019914_p23 hypothetical protein phrog_17364 unknown function unknown function 1 13206 13493
YP_007236613.1 NC_019914_p45 Zn carboxypeptidase phrog_4722 zinc carboxypeptidase other 1 30363 32237
YP_007236581.1 NC_019914_p13 exonuclease phrog_77 SbcC-like subunit of palindrome specific endonuclease DNA, RNA and nucleotide metabolism 1 6625 8574
YP_007236589.1 NC_019914_p21 hypothetical protein phrog_36386 unknown function unknown function 1 12594 12818
YP_007236614.1 NC_019914_p46 tail protein phrog_257 minor tail protein tail 1 32250 33446
YP_007236601.1 NC_019914_p33 scaffold protein phrog_172 head scaffolding protein head and packaging 1 20330 20935
YP_007236586.1 NC_019914_p18 hypothetical protein phrog_3 transcriptional repressor transcription regulation 1 11282 11485
YP_007236576.1 NC_019914_p8 hypothetical protein phrog_36581 unknown function unknown function 1 5500 5631
YP_007236593.1 NC_019914_p25 hypothetical protein phrog_2409 unknown function unknown function 1 13650 14096
YP_007236612.1 NC_019914_p44 endopeptidase phrog_326 tail protein with endopeptidase domain other 1 29102 30352
YP_007236571.1 NC_019914_p3 hypothetical protein phrog_5610 unknown function unknown function -1 2476 3558
YP_007236595.1 NC_019914_p27 hypothetical protein phrog_36 transcriptional regulator transcription regulation 1 14664 15071
YP_007236570.1 NC_019914_p2 hypothetical protein phrog_1412 antitoxin mazE-like moron, auxiliary metabolic gene and host takeover -1 1610 2353
YP_007236611.1 NC_019914_p43 tail protein phrog_33 distal tail protein Dit tail 1 28136 29092
YP_007236572.1 NC_019914_p4 hypothetical protein phrog_87 metallo-protease other -1 3581 4039
YP_007236608.1 NC_019914_p40 tail assembly protein phrog_183 tail chaperone protein tail 1 23965 24336
YP_007236600.1 NC_019914_p32 minor head protein phrog_115 minor head protein head and packaging 1 19057 20094
YP_007236606.1 NC_019914_p38 head structural protein phrog_176 tail terminator connector 1 22884 23282
YP_007236597.1 NC_019914_p29 TerS phrog_51 terminase small subunit head and packaging 1 15903 16328
YP_007236599.1 NC_019914_p31 portal protein phrog_64 portal protein head and packaging 1 17622 19073
YP_007236587.1 NC_019914_p19 transcriptional regulator phrog_3 transcriptional repressor transcription regulation 1 11482 11679
YP_007236569.1 NC_019914_p1 integrase phrog_95 integrase integration and excision -1 30 1415
YP_007236579.1 NC_019914_p11 transcriptional regulator phrog_11451 CI-like repressor transcription regulation 1 6025 6312
YP_007236621.1 NC_019914_p53 lysine phrog_635 endolysin lysis 1 38194 39930
YP_007236596.1 NC_019914_p28 hypothetical protein singleton unknown function unknown function 1 15331 15792
YP_007236603.1 NC_019914_p35 DNA packaging minor head protein phrog_132 head-tail adaptor connector 1 21890 22225
YP_007236575.1 NC_019914_p7 transcriptional regulator phrog_463 anti-repressor transcription regulation 1 4780 5499