Genomic map of Pseudomonas phage vB_PaeM_C2-10_Ab1 (NC_019918)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_019918
Definition
Pseudomonas phage vB_PaeM_C2-10_Ab1 complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Pakpunavirus.
DB of origin
REFSEQ
Length
92777
Host Name
Pseudomonas aeruginosa
Host domain
Bacteria
Is prophage?
undef
Number of proteins
158
%GC
49.27
Number of singletons
7
Number of paralogs
7

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_007236826.1 NC_019918_p5 hypothetical protein phrog_7453 unknown function unknown function -1 2515 3228
YP_007236857.1 NC_019918_p36 hypothetical protein phrog_6991 unknown function unknown function -1 18136 18414
YP_007236896.1 NC_019918_p75 hypothetical protein phrog_5847 holin lysis 1 48253 48492
YP_007236836.1 NC_019918_p15 hypothetical protein phrog_335 phosphatase other -1 6997 7476
YP_007236886.1 NC_019918_p65 hypothetical protein phrog_349 virion structural protein head and packaging 1 39103 39459
YP_007236883.1 NC_019918_p62 tape measure protein phrog_991 tail length tape measure protein tail 1 35973 38339
YP_007236912.1 NC_019918_p91 hypothetical protein phrog_4991 unknown function unknown function 1 55655 55951
YP_007236974.1 NC_019918_p153 hypothetical protein phrog_7753 unknown function unknown function 1 89125 89607
YP_007236869.1 NC_019918_p48 hypothetical protein phrog_113 portal protein head and packaging 1 26155 27594
YP_007236963.1 NC_019918_p142 hypothetical protein phrog_4261 unknown function unknown function 1 84916 85224
YP_007236880.1 NC_019918_p59 hypothetical protein phrog_280 virion structural protein head and packaging 1 34352 34852
YP_007236885.1 NC_019918_p64 hypothetical protein singleton unknown function unknown function -1 38507 39163
YP_007236931.1 NC_019918_p110 hypothetical protein phrog_221 metallo-phosphoesterase other 1 68034 68828
YP_007236882.1 NC_019918_p61 hypothetical protein phrog_1613 tail assembly chaperone tail 1 35345 35716
YP_007236895.1 NC_019918_p74 hypothetical protein phrog_2860 endolysin head and packaging 1 47636 48235
YP_007236914.1 NC_019918_p93 hypothetical protein phrog_7141 unknown function unknown function 1 56066 56374
YP_007236843.1 NC_019918_p22 hypothetical protein phrog_944 membrane protein moron, auxiliary metabolic gene and host takeover -1 11882 12289
YP_007236973.1 NC_019918_p152 hypothetical protein phrog_6876 unknown function unknown function 1 88930 89100
YP_007236972.1 NC_019918_p151 hypothetical protein phrog_6605 unknown function unknown function 1 88621 88902
YP_007236902.1 NC_019918_p81 RNA ligase phrog_968 RNA ligase DNA, RNA and nucleotide metabolism -1 51372 52508
YP_007236889.1 NC_019918_p68 hypothetical protein phrog_120 baseplate wedge subunit tail 1 40950 41492
YP_007236827.1 NC_019918_p6 hypothetical protein phrog_7742 unknown function unknown function -1 3225 3503
YP_007236890.1 NC_019918_p69 baseplate component phrog_6 baseplate wedge subunit tail 1 41494 42957
YP_007236918.1 NC_019918_p97 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 59212 61926
YP_007236907.1 NC_019918_p86 hypothetical protein phrog_3754 unknown function unknown function 1 53839 54183
YP_007236893.1 NC_019918_p72 hypothetical protein phrog_4628 tail fiber assembly tail 1 45800 46147
YP_007236876.1 NC_019918_p55 hypothetical protein phrog_939 head protein head and packaging 1 31483 31863
YP_007236906.1 NC_019918_p85 hypothetical protein singleton unknown function unknown function 1 53672 53842
YP_007236822.1 NC_019918_p1 hypothetical protein phrog_953 HNH endonuclease DNA, RNA and nucleotide metabolism 1 332 925
YP_007236900.1 NC_019918_p79 hypothetical protein phrog_7083 unknown function unknown function -1 50077 50424
YP_007236904.1 NC_019918_p83 hypothetical protein phrog_464 unknown function unknown function 1 53077 53496
YP_007236911.1 NC_019918_p90 hypothetical protein phrog_6917 unknown function unknown function 1 55491 55658
YP_007236864.1 NC_019918_p43 hypothetical protein singleton unknown function unknown function 1 20461 20886
YP_007236950.1 NC_019918_p129 hypothetical protein phrog_6266 unknown function unknown function 1 78125 79111
YP_007236859.1 NC_019918_p38 hypothetical protein phrog_343 unknown function unknown function -1 18910 19212
YP_007236879.1 NC_019918_p58 hypothetical protein phrog_280 virion structural protein head and packaging 1 33753 34277
YP_007236945.1 NC_019918_p124 hypothetical protein phrog_6863 unknown function unknown function 1 76372 76752
YP_007236959.1 NC_019918_p138 hypothetical protein phrog_2554 unknown function unknown function 1 83073 83744
YP_007236837.1 NC_019918_p16 hypothetical protein phrog_6997 unknown function unknown function -1 7473 7724
YP_007236952.1 NC_019918_p131 hypothetical protein phrog_38684 unknown function unknown function -1 79944 80108
YP_007236976.1 NC_019918_p155 hypothetical protein phrog_5746 unknown function unknown function 1 89747 90139
YP_007236917.1 NC_019918_p96 DNA primase/helicase phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism 1 57289 59151
YP_007236884.1 NC_019918_p63 hypothetical protein phrog_817 tail fiber protein tail 1 38336 39097
YP_007236905.1 NC_019918_p84 hypothetical protein phrog_6163 unknown function unknown function 1 53499 53696
YP_007236829.1 NC_019918_p8 hypothetical protein phrog_2614 unknown function unknown function -1 3802 4164
YP_007236971.1 NC_019918_p150 hypothetical protein phrog_5680 unknown function unknown function 1 88094 88621
YP_007236919.1 NC_019918_p98 hypothetical protein phrog_3878 unknown function unknown function 1 61800 62414
YP_007236962.1 NC_019918_p141 hypothetical protein phrog_6818 unknown function unknown function 1 84583 84897
YP_007236953.1 NC_019918_p132 hypothetical protein phrog_3768 unknown function unknown function 1 80070 80609
YP_007236926.1 NC_019918_p105 exodeoxyribonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 65021 66085
YP_007236928.1 NC_019918_p107 hypothetical protein phrog_5822 unknown function unknown function 1 66642 67040
YP_007236899.1 NC_019918_p78 hypothetical protein phrog_2827 unknown function unknown function -1 49757 50065
YP_007236862.1 NC_019918_p41 hypothetical protein phrog_5067 unknown function unknown function -1 20042 20398
YP_007236944.1 NC_019918_p123 hypothetical protein phrog_7233 unknown function unknown function 1 76278 76463
YP_007236877.1 NC_019918_p56 hypothetical protein phrog_4087 unknown function unknown function 1 31860 32423
YP_007236923.1 NC_019918_p102 hypothetical protein singleton unknown function unknown function -1 63406 64503
YP_007236849.1 NC_019918_p28 hypothetical protein singleton unknown function unknown function 1 14938 15498
YP_007236831.1 NC_019918_p10 hypothetical protein phrog_7178 unknown function unknown function -1 4503 4691
YP_007236965.1 NC_019918_p144 hypothetical protein phrog_4025 unknown function unknown function 1 85478 85744
YP_007236824.1 NC_019918_p3 hypothetical protein phrog_7262 unknown function unknown function -1 1676 2107
YP_007236881.1 NC_019918_p60 hypothetical protein phrog_280 virion structural protein head and packaging 1 34852 35331
YP_007236833.1 NC_019918_p12 hypothetical protein phrog_3360 unknown function unknown function -1 5058 5561
YP_007236887.1 NC_019918_p66 hypothetical protein phrog_196 baseplate hub tail 1 39549 40373
YP_007236956.1 NC_019918_p135 hypothetical protein phrog_5289 unknown function unknown function 1 81413 81649
YP_007236828.1 NC_019918_p7 hypothetical protein phrog_7430 unknown function unknown function -1 3491 3802
YP_007236841.1 NC_019918_p20 hypothetical protein phrog_2071 ATPase other -1 10526 10942
YP_007236840.1 NC_019918_p19 ribose-phosphate pyrophosphokinase phrog_619 ribose-phosphate pyrophosphokinase other -1 9641 10516
YP_007236872.1 NC_019918_p51 hypothetical protein phrog_49 head decoration head and packaging 1 29016 29426
YP_007236898.1 NC_019918_p77 hypothetical protein phrog_4172 unknown function unknown function 1 49054 49359
YP_007236930.1 NC_019918_p109 hypothetical protein phrog_4305 unknown function unknown function 1 67698 67868
YP_007236861.1 NC_019918_p40 protease subunit phrog_1827 ATP-dependent protease other -1 19446 19994
YP_007236929.1 NC_019918_p108 hypothetical protein phrog_7013 unknown function unknown function 1 67240 67701
YP_007236954.1 NC_019918_p133 hypothetical protein phrog_5201 unknown function unknown function 1 80691 80960
YP_007236901.1 NC_019918_p80 hypothetical protein phrog_6945 unknown function unknown function -1 50399 51274
YP_007236909.1 NC_019918_p88 hypothetical protein phrog_4256 unknown function unknown function 1 54462 54851
YP_007236878.1 NC_019918_p57 hypothetical protein phrog_205 tail sheath tail 1 32436 33722
YP_007236834.1 NC_019918_p13 hypothetical protein phrog_6932 unknown function unknown function -1 5548 5979
YP_007236839.1 NC_019918_p18 hypothetical protein phrog_7663 unknown function unknown function -1 9426 9644
YP_007236977.1 NC_019918_p156 hypothetical protein phrog_11201 unknown function unknown function 1 90235 90501
YP_007236932.1 NC_019918_p111 hypothetical protein singleton unknown function unknown function 1 68738 69007
YP_007236845.1 NC_019918_p24 phosphoesterase phrog_547 phosphoesterase other -1 12812 13366
YP_007236921.1 NC_019918_p100 hypothetical protein phrog_6824 unknown function unknown function 1 62612 63322
YP_007236947.1 NC_019918_p126 hypothetical protein phrog_6846 unknown function unknown function 1 77259 77453
YP_007236939.1 NC_019918_p118 ribonucleoside-diphosphate reductase alpha chain phrog_84 ribonucleoside-diphosphate reductase large subunit DNA, RNA and nucleotide metabolism 1 73315 75060
YP_007236860.1 NC_019918_p39 hypothetical protein phrog_6961 unknown function unknown function -1 19200 19385
YP_007236850.1 NC_019918_p29 hypothetical protein phrog_2686 unknown function unknown function -1 14974 15435
YP_007236851.1 NC_019918_p30 DNA ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism -1 15448 16656
YP_007236873.1 NC_019918_p52 Major capsid protein phrog_29 major head protein head and packaging 1 29471 30505
YP_007236966.1 NC_019918_p145 hypothetical protein phrog_6935 unknown function unknown function 1 85741 86133
YP_007236847.1 NC_019918_p26 phosphohydrolase phrog_990 metal-dependent phosphohydrolase other -1 13787 14347
YP_007236969.1 NC_019918_p148 hypothetical protein phrog_4261 unknown function unknown function 1 87161 87490
YP_007236838.1 NC_019918_p17 nicotinamide phosphoribosyl transferase phrog_448 nicotinamide phosphoribosyl transferase other -1 7681 9402
YP_007236920.1 NC_019918_p99 hypothetical protein phrog_7532 unknown function unknown function 1 62443 62610
YP_007236949.1 NC_019918_p128 hypothetical protein phrog_6076 unknown function unknown function 1 77706 77957
YP_007236946.1 NC_019918_p125 hypothetical protein phrog_6974 unknown function unknown function 1 76761 77249
YP_007236891.1 NC_019918_p70 hypothetical protein phrog_587 structural protein head and packaging 1 42976 43707
YP_007236967.1 NC_019918_p146 hypothetical protein phrog_3303 unknown function unknown function 1 86248 86832
YP_007236922.1 NC_019918_p101 hypothetical protein phrog_2544 unknown function unknown function 1 63379 64428
YP_007236936.1 NC_019918_p115 thymidylate synthase phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism 1 70948 71913
YP_007236943.1 NC_019918_p122 hypothetical protein phrog_9028 unknown function unknown function 1 75974 76288
YP_007236978.1 NC_019918_p157 hypothetical protein phrog_4310 unknown function unknown function 1 90601 90795
YP_007236964.1 NC_019918_p143 hypothetical protein phrog_6913 unknown function unknown function 1 85221 85445
YP_007236852.1 NC_019918_p31 dCMP deaminase phrog_174 dCMP deaminase DNA, RNA and nucleotide metabolism -1 16653 17042
YP_007236942.1 NC_019918_p121 hypothetical protein phrog_7088 unknown function unknown function 1 75738 75974
YP_007236979.1 NC_019918_p158 hypothetical protein phrog_953 HNH endonuclease DNA, RNA and nucleotide metabolism 1 91956 92549
YP_007236968.1 NC_019918_p147 hypothetical protein phrog_6091 unknown function unknown function 1 86904 87149
YP_007236875.1 NC_019918_p54 hypothetical protein phrog_222 tail completion or Neck1 protein connector 1 30941 31483
YP_007236825.1 NC_019918_p4 hypothetical protein phrog_6773 unknown function unknown function -1 2076 2498
YP_007236855.1 NC_019918_p34 hypothetical protein phrog_5276 unknown function unknown function -1 17527 17796
YP_007236865.1 NC_019918_p44 hypothetical protein phrog_10364 unknown function unknown function 1 21335 21523
YP_007236835.1 NC_019918_p14 hypothetical protein phrog_768 DprA-like DNA recombination-mediator protein DNA, RNA and nucleotide metabolism -1 5945 6652
YP_007236960.1 NC_019918_p139 hypothetical protein phrog_5336 unknown function unknown function 1 83719 84087
YP_007236867.1 NC_019918_p46 hypothetical protein phrog_30774 unknown function unknown function -1 24219 24500
YP_007236853.1 NC_019918_p32 hypothetical protein phrog_7094 unknown function unknown function -1 17072 17308
YP_007236858.1 NC_019918_p37 hypothetical protein phrog_7048 unknown function unknown function -1 18411 18842
YP_007236934.1 NC_019918_p113 hypothetical protein phrog_7016 unknown function unknown function 1 69631 69798
YP_007236933.1 NC_019918_p112 hypothetical protein phrog_6971 unknown function unknown function 1 69247 69582
YP_007236844.1 NC_019918_p23 hypothetical protein phrog_2339 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 12286 12561
YP_007236927.1 NC_019918_p106 hypothetical protein phrog_1985 HNH endonuclease DNA, RNA and nucleotide metabolism 1 66082 66645
YP_007236894.1 NC_019918_p73 hypothetical protein phrog_2282 tail fiber protein tail 1 46159 47658
YP_007236957.1 NC_019918_p136 hypothetical protein phrog_2267 unknown function unknown function 1 81848 82156
YP_007236924.1 NC_019918_p103 hypothetical protein phrog_7883 unknown function unknown function 1 64509 64760
YP_007236871.1 NC_019918_p50 hypothetical protein phrog_4103 unknown function unknown function 1 28071 28988
YP_007236903.1 NC_019918_p82 hypothetical protein phrog_4794 unknown function unknown function -1 52556 53017
YP_007236938.1 NC_019918_p117 ribonucleotide-diphosphate reductase beta subunit phrog_86 ribonucleoside diphosphate reductase small subunit DNA, RNA and nucleotide metabolism 1 72174 73322
YP_007236948.1 NC_019918_p127 hypothetical protein phrog_5041 unknown function unknown function 1 77362 77694
YP_007236955.1 NC_019918_p134 hypothetical protein phrog_6871 unknown function unknown function 1 81116 81403
YP_007236863.1 NC_019918_p42 hypothetical protein phrog_5019 unknown function unknown function -1 20395 20862
YP_007236854.1 NC_019918_p33 hypothetical protein phrog_2251 unknown function unknown function -1 17318 17530
YP_007236913.1 NC_019918_p92 hypothetical protein phrog_31088 unknown function unknown function -1 56015 56344
YP_007236908.1 NC_019918_p87 hypothetical protein phrog_2834 unknown function unknown function 1 54206 54460
YP_007236868.1 NC_019918_p47 terminase large subunit phrog_979 terminase large subunit head and packaging 1 24622 26142
YP_007236830.1 NC_019918_p9 hypothetical protein phrog_2614 unknown function unknown function -1 4154 4447
YP_007236842.1 NC_019918_p21 RNA ligase/tail attachment protein phrog_562 RNA ligase and tail fiber protein attachment catalyst tail -1 10953 11906
YP_007236897.1 NC_019918_p76 hypothetical protein phrog_4349 Rz-like spanin lysis 1 48479 48922
YP_007236823.1 NC_019918_p2 hypothetical protein phrog_7340 unknown function unknown function -1 1438 1704
YP_007236888.1 NC_019918_p67 baseplate protein phrog_11 baseplate spike tail 1 40370 41110
YP_007236866.1 NC_019918_p45 hypothetical protein phrog_3900 unknown function unknown function 1 21666 21989
YP_007236915.1 NC_019918_p94 hypothetical protein phrog_6115 unknown function unknown function 1 56808 57053
YP_007236925.1 NC_019918_p104 hypothetical protein phrog_6983 unknown function unknown function 1 64767 64991
YP_007236940.1 NC_019918_p119 hypothetical protein phrog_343 unknown function unknown function 1 75164 75505
YP_007236916.1 NC_019918_p95 hypothetical protein singleton unknown function unknown function 1 56981 57235
YP_007236832.1 NC_019918_p11 hypothetical protein phrog_6967 unknown function unknown function -1 4715 5089
YP_007236961.1 NC_019918_p140 hypothetical protein phrog_7542 unknown function unknown function 1 84015 84440
YP_007236874.1 NC_019918_p53 hypothetical protein phrog_1732 unknown function unknown function 1 30556 31032
YP_007236848.1 NC_019918_p27 cell wall hydrolase phrog_938 endolysin lysis -1 14349 14909
YP_007236970.1 NC_019918_p149 hypothetical protein phrog_1106 unknown function unknown function 1 87527 87970
YP_007236975.1 NC_019918_p154 hypothetical protein phrog_3968 unknown function unknown function 1 89622 89852
YP_007236892.1 NC_019918_p71 tail fiber protein phrog_2282 tail fiber protein tail 1 43718 45733
YP_007236937.1 NC_019918_p116 hypothetical protein phrog_3506 thymidylate synthase DNA, RNA and nucleotide metabolism 1 71879 72259
YP_007236935.1 NC_019918_p114 hypothetical protein phrog_7063 3'-phosphatase, 5'-polynucleotide kinase other 1 69791 70741
YP_007236941.1 NC_019918_p120 hypothetical protein phrog_6898 unknown function unknown function 1 75463 75738
YP_007236870.1 NC_019918_p49 methyltransferase phrog_1530 DNA methyltransferase other 1 27604 28074
YP_007236910.1 NC_019918_p89 hypothetical protein phrog_7101 unknown function unknown function 1 54848 55504
YP_007236951.1 NC_019918_p130 hypothetical protein phrog_8175 unknown function unknown function 1 79334 79507
YP_007236958.1 NC_019918_p137 hypothetical protein phrog_7133 unknown function unknown function 1 82614 82997
YP_007236856.1 NC_019918_p35 hypothetical protein phrog_3948 unknown function unknown function -1 17805 18155
YP_007236846.1 NC_019918_p25 hypothetical protein phrog_6781 unknown function unknown function -1 13366 13707