Genomic map of Sulfolobus virus STSV2 (NC_020077)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_020077
Definition
Sulfolobus virus STSV2, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Bicaudaviridae; unclassified Bicaudaviridae.
DB of origin
REFSEQ
Length
76107
Host Name
Sulfolobus
Host domain
Archaea
Is prophage?
undef
Number of proteins
75
%GC
35.09
Number of singletons
7
Number of paralogs
10

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_007348299.1 NC_020077_p55 hypothetical protein phrog_33343 unknown function unknown function 1 58870 59310
YP_007348245.1 NC_020077_p1 hypothetical protein singleton unknown function unknown function 1 1264 1749
YP_007348266.1 NC_020077_p22 hypothetical protein phrog_876 transcriptional repressor transcription regulation 1 21029 21349
YP_007348313.1 NC_020077_p69 hypothetical protein phrog_11254 DnaA-like replication initiation protein DNA, RNA and nucleotide metabolism -1 71623 72654
YP_007348263.1 NC_020077_p19 hypothetical protein phrog_9615 unknown function unknown function 1 17462 18547
YP_007348267.1 NC_020077_p23 hypothetical protein phrog_9615 unknown function unknown function 1 21360 22634
YP_007348286.1 NC_020077_p42 hypothetical protein phrog_26255 unknown function unknown function 1 44846 45211
YP_007348277.1 NC_020077_p33 hypothetical protein phrog_22026 unknown function unknown function -1 36446 36889
YP_007348258.1 NC_020077_p14 hypothetical protein singleton unknown function unknown function 1 14258 14500
YP_007348255.1 NC_020077_p11 hypothetical protein phrog_38877 unknown function unknown function 1 12030 12275
YP_007348253.1 NC_020077_p9 hypothetical protein phrog_14919 unknown function unknown function 1 8718 9617
YP_007348306.1 NC_020077_p62 integral membrane protein phrog_24117 membrane protein moron, auxiliary metabolic gene and host takeover -1 63686 65521
YP_007348265.1 NC_020077_p21 hypothetical protein phrog_9615 unknown function unknown function 1 19798 20865
YP_007348271.1 NC_020077_p27 hypothetical protein phrog_36431 unknown function unknown function 1 26230 26547
YP_007348304.1 NC_020077_p60 hypothetical protein phrog_32966 unknown function unknown function -1 62184 62567
YP_007348295.1 NC_020077_p51 hypothetical protein phrog_24632 unknown function unknown function -1 52454 52702
YP_007348259.1 NC_020077_p15 hypothetical protein phrog_887 queuine tRNA-ribosyltransferase moron, auxiliary metabolic gene and host takeover 1 14485 15360
YP_007348260.1 NC_020077_p16 hypothetical protein phrog_34505 unknown function unknown function 1 15338 15895
YP_007348287.1 NC_020077_p43 hypothetical protein phrog_27948 unknown function unknown function 1 45394 45942
YP_007348285.1 NC_020077_p41 hypothetical protein phrog_35583 unknown function unknown function -1 44491 44814
YP_007348246.1 NC_020077_p2 hypothetical protein singleton unknown function unknown function 1 2589 2981
YP_007348318.1 NC_020077_p74 hypothetical protein phrog_31106 unknown function unknown function 1 74433 75305
YP_007348292.1 NC_020077_p48 ATPase phrog_9172 unknown function unknown function -1 48532 50112
YP_007348282.1 NC_020077_p38 hypothetical protein phrog_11364 transmembrane protein other 1 41155 43377
YP_007348252.1 NC_020077_p8 hypothetical protein phrog_14919 unknown function unknown function 1 7539 8492
YP_007348257.1 NC_020077_p13 thymidylate synthase phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism 1 13480 14253
YP_007348280.1 NC_020077_p36 hypothetical protein phrog_16261 virion structural protein head and packaging -1 40165 40524
YP_007348297.1 NC_020077_p53 hypothetical protein phrog_33101 unknown function unknown function -1 57436 57786
YP_007348308.1 NC_020077_p64 nucleoside-diphosphate-sugar epimerase phrog_540 nucleotide-sugar epimerase DNA, RNA and nucleotide metabolism -1 65907 66869
YP_007348298.1 NC_020077_p54 integrase phrog_9208 integrase integration and excision -1 57839 58390
YP_007348288.1 NC_020077_p44 hypothetical protein phrog_34074 unknown function unknown function -1 45939 46175
YP_007348256.1 NC_020077_p12 hypothetical protein phrog_14919 unknown function unknown function 1 12468 13466
YP_007348274.1 NC_020077_p30 dUTPase phrog_1663 dCTP deaminase DNA, RNA and nucleotide metabolism 1 27693 28211
YP_007348250.1 NC_020077_p6 hypothetical protein phrog_34350 unknown function unknown function 1 6144 6689
YP_007348251.1 NC_020077_p7 hypothetical protein phrog_34350 unknown function unknown function 1 6710 7267
YP_007348305.1 NC_020077_p61 glycosyltransferase group I phrog_2170 glycosyltransferase moron, auxiliary metabolic gene and host takeover -1 62654 63646
YP_007348315.1 NC_020077_p71 hypothetical protein phrog_28160 unknown function unknown function -1 73015 73224
YP_007348283.1 NC_020077_p39 hypothetical protein phrog_28911 unknown function unknown function -1 43378 43980
YP_007348293.1 NC_020077_p49 hypothetical protein phrog_23662 unknown function unknown function -1 50125 51018
YP_007348296.1 NC_020077_p52 hypothetical protein phrog_8969 unknown function unknown function 1 52783 57426
YP_007348316.1 NC_020077_p72 hypothetical protein phrog_31442 unknown function unknown function -1 73236 73856
YP_007348300.1 NC_020077_p56 hypothetical protein phrog_36913 unknown function unknown function 1 59338 59766
YP_007348268.1 NC_020077_p24 hypothetical protein phrog_28589 unknown function unknown function 1 22815 23621
YP_007348307.1 NC_020077_p63 hypothetical protein singleton unknown function unknown function 1 65556 65873
YP_007348317.1 NC_020077_p73 hypothetical protein phrog_28239 unknown function unknown function 1 74025 74426
YP_007348281.1 NC_020077_p37 coat protein phrog_14391 major head protein head and packaging 1 40639 41076
YP_007348269.1 NC_020077_p25 hypothetical protein phrog_9615 unknown function unknown function 1 23632 24615
YP_007348261.1 NC_020077_p17 hypothetical protein phrog_876 transcriptional repressor transcription regulation 1 16057 16377
YP_007348311.1 NC_020077_p67 hypothetical protein phrog_35388 unknown function unknown function 1 69557 70039
YP_007348290.1 NC_020077_p46 hypothetical protein phrog_22047 unknown function unknown function -1 46840 47463
YP_007348275.1 NC_020077_p31 hypothetical protein phrog_22810 unknown function unknown function 1 28342 35409
YP_007348278.1 NC_020077_p34 hypothetical protein phrog_38696 unknown function unknown function -1 36989 39238
YP_007348264.1 NC_020077_p20 hypothetical protein phrog_9615 unknown function unknown function 1 18559 19770
YP_007348262.1 NC_020077_p18 hypothetical protein phrog_9615 unknown function unknown function 1 16389 17450
YP_007348291.1 NC_020077_p47 hypothetical protein phrog_27360 unknown function unknown function -1 47460 48443
YP_007348284.1 NC_020077_p40 hypothetical protein phrog_36517 unknown function unknown function -1 43973 44458
YP_007348303.1 NC_020077_p59 cytosine methylase phrog_18146 DNA methyltransferase other -1 60933 62171
YP_007348279.1 NC_020077_p35 hypothetical protein phrog_25734 unknown function unknown function 1 39608 40108
YP_007348254.1 NC_020077_p10 adenine-specific DNA methylase phrog_10183 DNA methyltransferase other 1 9660 11882
YP_007348272.1 NC_020077_p28 hypothetical protein phrog_34698 unknown function unknown function 1 26593 26895
YP_007348301.1 NC_020077_p57 hypothetical protein phrog_38210 unknown function unknown function -1 59763 60101
YP_007348249.1 NC_020077_p5 hypothetical protein singleton unknown function unknown function 1 5561 5923
YP_007348310.1 NC_020077_p66 IS605 ORFB family protein phrog_506 transposase integration and excision -1 68118 69368
YP_007348294.1 NC_020077_p50 IS605 ORFB family protein phrog_506 transposase integration and excision -1 51015 52298
YP_007348312.1 NC_020077_p68 hypothetical protein phrog_31035 unknown function unknown function -1 70896 71660
YP_007348309.1 NC_020077_p65 N4-cytosine methylase phrog_67 DNA methyltransferase other -1 66960 67853
YP_007348273.1 NC_020077_p29 hypothetical protein phrog_35815 unknown function unknown function 1 26911 27666
YP_007348270.1 NC_020077_p26 polysaccharide biosynthesis-related protein phrog_36678 unknown function unknown function 1 24628 26034
YP_007348319.1 NC_020077_p75 hypothetical protein phrog_28281 unknown function unknown function -1 75202 76020
YP_007348314.1 NC_020077_p70 hypothetical protein singleton unknown function unknown function 1 72709 73023
YP_007348247.1 NC_020077_p3 hypothetical protein singleton unknown function unknown function 1 3663 4103
YP_007348276.1 NC_020077_p32 hypothetical protein phrog_35910 unknown function unknown function -1 35404 36402
YP_007348289.1 NC_020077_p45 hypothetical protein phrog_23486 unknown function unknown function -1 46172 46798
YP_007348248.1 NC_020077_p4 hypothetical protein phrog_19764 unknown function unknown function 1 4629 5564
YP_007348302.1 NC_020077_p58 hypothetical protein phrog_32800 unknown function unknown function 1 60364 60789