| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_020077 |
Definition |
Sulfolobus virus STSV2, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Bicaudaviridae; unclassified Bicaudaviridae. |
DB of origin |
REFSEQ |
Length |
76107 |
Host Name |
Sulfolobus |
Host domain |
Archaea |
Is prophage? |
undef |
Number of proteins |
75 |
%GC |
35.09 |
Number of singletons |
7 |
Number of paralogs |
10 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_007348299.1 | NC_020077_p55 | hypothetical protein | phrog_33343 | unknown function | unknown function | 1 | 58870 | 59310 |
| YP_007348245.1 | NC_020077_p1 | hypothetical protein | singleton | unknown function | unknown function | 1 | 1264 | 1749 |
| YP_007348266.1 | NC_020077_p22 | hypothetical protein | phrog_876 | transcriptional repressor | transcription regulation | 1 | 21029 | 21349 |
| YP_007348313.1 | NC_020077_p69 | hypothetical protein | phrog_11254 | DnaA-like replication initiation protein | DNA, RNA and nucleotide metabolism | -1 | 71623 | 72654 |
| YP_007348263.1 | NC_020077_p19 | hypothetical protein | phrog_9615 | unknown function | unknown function | 1 | 17462 | 18547 |
| YP_007348267.1 | NC_020077_p23 | hypothetical protein | phrog_9615 | unknown function | unknown function | 1 | 21360 | 22634 |
| YP_007348286.1 | NC_020077_p42 | hypothetical protein | phrog_26255 | unknown function | unknown function | 1 | 44846 | 45211 |
| YP_007348277.1 | NC_020077_p33 | hypothetical protein | phrog_22026 | unknown function | unknown function | -1 | 36446 | 36889 |
| YP_007348258.1 | NC_020077_p14 | hypothetical protein | singleton | unknown function | unknown function | 1 | 14258 | 14500 |
| YP_007348255.1 | NC_020077_p11 | hypothetical protein | phrog_38877 | unknown function | unknown function | 1 | 12030 | 12275 |
| YP_007348253.1 | NC_020077_p9 | hypothetical protein | phrog_14919 | unknown function | unknown function | 1 | 8718 | 9617 |
| YP_007348306.1 | NC_020077_p62 | integral membrane protein | phrog_24117 | membrane protein | moron, auxiliary metabolic gene and host takeover | -1 | 63686 | 65521 |
| YP_007348265.1 | NC_020077_p21 | hypothetical protein | phrog_9615 | unknown function | unknown function | 1 | 19798 | 20865 |
| YP_007348271.1 | NC_020077_p27 | hypothetical protein | phrog_36431 | unknown function | unknown function | 1 | 26230 | 26547 |
| YP_007348304.1 | NC_020077_p60 | hypothetical protein | phrog_32966 | unknown function | unknown function | -1 | 62184 | 62567 |
| YP_007348295.1 | NC_020077_p51 | hypothetical protein | phrog_24632 | unknown function | unknown function | -1 | 52454 | 52702 |
| YP_007348259.1 | NC_020077_p15 | hypothetical protein | phrog_887 | queuine tRNA-ribosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 14485 | 15360 |
| YP_007348260.1 | NC_020077_p16 | hypothetical protein | phrog_34505 | unknown function | unknown function | 1 | 15338 | 15895 |
| YP_007348287.1 | NC_020077_p43 | hypothetical protein | phrog_27948 | unknown function | unknown function | 1 | 45394 | 45942 |
| YP_007348285.1 | NC_020077_p41 | hypothetical protein | phrog_35583 | unknown function | unknown function | -1 | 44491 | 44814 |
| YP_007348246.1 | NC_020077_p2 | hypothetical protein | singleton | unknown function | unknown function | 1 | 2589 | 2981 |
| YP_007348318.1 | NC_020077_p74 | hypothetical protein | phrog_31106 | unknown function | unknown function | 1 | 74433 | 75305 |
| YP_007348292.1 | NC_020077_p48 | ATPase | phrog_9172 | unknown function | unknown function | -1 | 48532 | 50112 |
| YP_007348282.1 | NC_020077_p38 | hypothetical protein | phrog_11364 | transmembrane protein | other | 1 | 41155 | 43377 |
| YP_007348252.1 | NC_020077_p8 | hypothetical protein | phrog_14919 | unknown function | unknown function | 1 | 7539 | 8492 |
| YP_007348257.1 | NC_020077_p13 | thymidylate synthase | phrog_85 | thymidylate synthase | DNA, RNA and nucleotide metabolism | 1 | 13480 | 14253 |
| YP_007348280.1 | NC_020077_p36 | hypothetical protein | phrog_16261 | virion structural protein | head and packaging | -1 | 40165 | 40524 |
| YP_007348297.1 | NC_020077_p53 | hypothetical protein | phrog_33101 | unknown function | unknown function | -1 | 57436 | 57786 |
| YP_007348308.1 | NC_020077_p64 | nucleoside-diphosphate-sugar epimerase | phrog_540 | nucleotide-sugar epimerase | DNA, RNA and nucleotide metabolism | -1 | 65907 | 66869 |
| YP_007348298.1 | NC_020077_p54 | integrase | phrog_9208 | integrase | integration and excision | -1 | 57839 | 58390 |
| YP_007348288.1 | NC_020077_p44 | hypothetical protein | phrog_34074 | unknown function | unknown function | -1 | 45939 | 46175 |
| YP_007348256.1 | NC_020077_p12 | hypothetical protein | phrog_14919 | unknown function | unknown function | 1 | 12468 | 13466 |
| YP_007348274.1 | NC_020077_p30 | dUTPase | phrog_1663 | dCTP deaminase | DNA, RNA and nucleotide metabolism | 1 | 27693 | 28211 |
| YP_007348250.1 | NC_020077_p6 | hypothetical protein | phrog_34350 | unknown function | unknown function | 1 | 6144 | 6689 |
| YP_007348251.1 | NC_020077_p7 | hypothetical protein | phrog_34350 | unknown function | unknown function | 1 | 6710 | 7267 |
| YP_007348305.1 | NC_020077_p61 | glycosyltransferase group I | phrog_2170 | glycosyltransferase | moron, auxiliary metabolic gene and host takeover | -1 | 62654 | 63646 |
| YP_007348315.1 | NC_020077_p71 | hypothetical protein | phrog_28160 | unknown function | unknown function | -1 | 73015 | 73224 |
| YP_007348283.1 | NC_020077_p39 | hypothetical protein | phrog_28911 | unknown function | unknown function | -1 | 43378 | 43980 |
| YP_007348293.1 | NC_020077_p49 | hypothetical protein | phrog_23662 | unknown function | unknown function | -1 | 50125 | 51018 |
| YP_007348296.1 | NC_020077_p52 | hypothetical protein | phrog_8969 | unknown function | unknown function | 1 | 52783 | 57426 |
| YP_007348316.1 | NC_020077_p72 | hypothetical protein | phrog_31442 | unknown function | unknown function | -1 | 73236 | 73856 |
| YP_007348300.1 | NC_020077_p56 | hypothetical protein | phrog_36913 | unknown function | unknown function | 1 | 59338 | 59766 |
| YP_007348268.1 | NC_020077_p24 | hypothetical protein | phrog_28589 | unknown function | unknown function | 1 | 22815 | 23621 |
| YP_007348307.1 | NC_020077_p63 | hypothetical protein | singleton | unknown function | unknown function | 1 | 65556 | 65873 |
| YP_007348317.1 | NC_020077_p73 | hypothetical protein | phrog_28239 | unknown function | unknown function | 1 | 74025 | 74426 |
| YP_007348281.1 | NC_020077_p37 | coat protein | phrog_14391 | major head protein | head and packaging | 1 | 40639 | 41076 |
| YP_007348269.1 | NC_020077_p25 | hypothetical protein | phrog_9615 | unknown function | unknown function | 1 | 23632 | 24615 |
| YP_007348261.1 | NC_020077_p17 | hypothetical protein | phrog_876 | transcriptional repressor | transcription regulation | 1 | 16057 | 16377 |
| YP_007348311.1 | NC_020077_p67 | hypothetical protein | phrog_35388 | unknown function | unknown function | 1 | 69557 | 70039 |
| YP_007348290.1 | NC_020077_p46 | hypothetical protein | phrog_22047 | unknown function | unknown function | -1 | 46840 | 47463 |
| YP_007348275.1 | NC_020077_p31 | hypothetical protein | phrog_22810 | unknown function | unknown function | 1 | 28342 | 35409 |
| YP_007348278.1 | NC_020077_p34 | hypothetical protein | phrog_38696 | unknown function | unknown function | -1 | 36989 | 39238 |
| YP_007348264.1 | NC_020077_p20 | hypothetical protein | phrog_9615 | unknown function | unknown function | 1 | 18559 | 19770 |
| YP_007348262.1 | NC_020077_p18 | hypothetical protein | phrog_9615 | unknown function | unknown function | 1 | 16389 | 17450 |
| YP_007348291.1 | NC_020077_p47 | hypothetical protein | phrog_27360 | unknown function | unknown function | -1 | 47460 | 48443 |
| YP_007348284.1 | NC_020077_p40 | hypothetical protein | phrog_36517 | unknown function | unknown function | -1 | 43973 | 44458 |
| YP_007348303.1 | NC_020077_p59 | cytosine methylase | phrog_18146 | DNA methyltransferase | other | -1 | 60933 | 62171 |
| YP_007348279.1 | NC_020077_p35 | hypothetical protein | phrog_25734 | unknown function | unknown function | 1 | 39608 | 40108 |
| YP_007348254.1 | NC_020077_p10 | adenine-specific DNA methylase | phrog_10183 | DNA methyltransferase | other | 1 | 9660 | 11882 |
| YP_007348272.1 | NC_020077_p28 | hypothetical protein | phrog_34698 | unknown function | unknown function | 1 | 26593 | 26895 |
| YP_007348301.1 | NC_020077_p57 | hypothetical protein | phrog_38210 | unknown function | unknown function | -1 | 59763 | 60101 |
| YP_007348249.1 | NC_020077_p5 | hypothetical protein | singleton | unknown function | unknown function | 1 | 5561 | 5923 |
| YP_007348310.1 | NC_020077_p66 | IS605 ORFB family protein | phrog_506 | transposase | integration and excision | -1 | 68118 | 69368 |
| YP_007348294.1 | NC_020077_p50 | IS605 ORFB family protein | phrog_506 | transposase | integration and excision | -1 | 51015 | 52298 |
| YP_007348312.1 | NC_020077_p68 | hypothetical protein | phrog_31035 | unknown function | unknown function | -1 | 70896 | 71660 |
| YP_007348309.1 | NC_020077_p65 | N4-cytosine methylase | phrog_67 | DNA methyltransferase | other | -1 | 66960 | 67853 |
| YP_007348273.1 | NC_020077_p29 | hypothetical protein | phrog_35815 | unknown function | unknown function | 1 | 26911 | 27666 |
| YP_007348270.1 | NC_020077_p26 | polysaccharide biosynthesis-related protein | phrog_36678 | unknown function | unknown function | 1 | 24628 | 26034 |
| YP_007348319.1 | NC_020077_p75 | hypothetical protein | phrog_28281 | unknown function | unknown function | -1 | 75202 | 76020 |
| YP_007348314.1 | NC_020077_p70 | hypothetical protein | singleton | unknown function | unknown function | 1 | 72709 | 73023 |
| YP_007348247.1 | NC_020077_p3 | hypothetical protein | singleton | unknown function | unknown function | 1 | 3663 | 4103 |
| YP_007348276.1 | NC_020077_p32 | hypothetical protein | phrog_35910 | unknown function | unknown function | -1 | 35404 | 36402 |
| YP_007348289.1 | NC_020077_p45 | hypothetical protein | phrog_23486 | unknown function | unknown function | -1 | 46172 | 46798 |
| YP_007348248.1 | NC_020077_p4 | hypothetical protein | phrog_19764 | unknown function | unknown function | 1 | 4629 | 5564 |
| YP_007348302.1 | NC_020077_p58 | hypothetical protein | phrog_32800 | unknown function | unknown function | 1 | 60364 | 60789 |