Genomic map of Pseudomonas phage JBD24 (NC_020203)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_020203
Definition
Pseudomonas phage JBD24, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Casadabanvirus; unclassified Casadabanvirus.
DB of origin
REFSEQ
Length
37095
Host Name
Pseudomonas
Host domain
Bacteria
Is prophage?
undef
Number of proteins
58
%GC
64.24
Number of singletons
0
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_007392804.1 NC_020203_p41 protein of an unannotated phage phrog_4833 unknown function unknown function 1 21703 22044
YP_007392811.1 NC_020203_p48 protein of an unannotated phage phrog_2335 tail length tape measure protein tail 1 24711 28193
YP_007392768.1 NC_020203_p5 protein of an unannotated phage phrog_310 transposase integration and excision 1 2317 4386
YP_007392792.1 NC_020203_p29 protein of an unannotated phage phrog_13614 unknown function unknown function 1 13101 13352
YP_007392771.1 NC_020203_p8 protein of an unannotated phage phrog_3765 unknown function unknown function 1 5782 5898
YP_007392802.1 NC_020203_p39 protein of an unannotated phage phrog_328 head maturation protease head and packaging 1 19621 20718
YP_007392777.1 NC_020203_p14 protein of an unannotated phage phrog_1518 host nuclease inhibitor moron, auxiliary metabolic gene and host takeover 1 7716 7997
YP_007392807.1 NC_020203_p44 protein of an unannotated phage phrog_209 portal protein head and packaging 1 22621 23094
YP_007392803.1 NC_020203_p40 protein of an unannotated phage phrog_371 major head protein head and packaging 1 20722 21636
YP_007392775.1 NC_020203_p12 protein of an unannotated phage phrog_1518 host nuclease inhibitor moron, auxiliary metabolic gene and host takeover 1 7122 7403
YP_007392819.1 NC_020203_p56 protein of an unannotated phage phrog_2875 virion structural protein head and packaging 1 35252 36403
YP_007392770.1 NC_020203_p7 protein of an unannotated phage phrog_2030 transcriptional regulator transcription regulation 1 5150 5797
YP_007392788.1 NC_020203_p25 protein of an unannotated phage phrog_2975 Rz-like spanin lysis 1 11892 12293
YP_007392778.1 NC_020203_p15 protein of an unannotated phage phrog_3223 unknown function unknown function 1 7999 8205
YP_007392773.1 NC_020203_p10 protein of an unannotated phage phrog_2043 unknown function unknown function 1 6313 6585
YP_007392815.1 NC_020203_p52 protein of an unannotated phage phrog_778 tail assembly protein tail 1 31774 32595
YP_007392786.1 NC_020203_p23 protein of an unannotated phage phrog_873 endolysin head and packaging 1 11237 11653
YP_007392818.1 NC_020203_p55 protein of an unannotated phage phrog_1101 tail protein tail 1 33048 35255
YP_007392810.1 NC_020203_p47 protein of an unannotated phage phrog_1442 tail assembly chaperone tail 1 24068 24562
YP_007392780.1 NC_020203_p17 protein of an unannotated phage phrog_421 unknown function unknown function 1 8553 9224
YP_007392767.1 NC_020203_p4 protein of an unannotated phage phrog_15608 unknown function unknown function 1 1893 2324
YP_007392789.1 NC_020203_p26 protein of an unannotated phage phrog_8661 unknown function unknown function 1 12286 12399
YP_007392769.1 NC_020203_p6 protein of an unannotated phage phrog_296 DNA transposition protein integration and excision 1 4401 5153
YP_007392814.1 NC_020203_p51 protein of an unannotated phage phrog_1082 tail assembly protein tail 1 30081 31784
YP_007392812.1 NC_020203_p49 protein of an unannotated phage phrog_687 structural protein head and packaging 1 28200 29156
YP_007392791.1 NC_020203_p28 protein of an unannotated phage phrog_756 DNA binding protein DNA, RNA and nucleotide metabolism 1 12601 13101
YP_007392787.1 NC_020203_p24 protein of an unannotated phage phrog_4057 unknown function unknown function 1 11653 11895
YP_007392793.1 NC_020203_p30 protein of an unannotated phage phrog_14530 unknown function unknown function -1 13306 13557
YP_007392784.1 NC_020203_p21 protein of an unannotated phage phrog_3648 unknown function unknown function 1 10475 10822
YP_007392779.1 NC_020203_p16 protein of an unannotated phage phrog_3652 unknown function unknown function 1 8208 8477
YP_007392809.1 NC_020203_p46 protein of an unannotated phage phrog_807 major tail protein with Ig-like domain tail 1 23294 24064
YP_007392816.1 NC_020203_p53 protein of an unannotated phage phrog_1180 tail assembly chaperone tail 1 32604 32843
YP_007392799.1 NC_020203_p36 protein of an unannotated phage phrog_9769 type I-F anti-CRISPR protein moron, auxiliary metabolic gene and host takeover 1 18888 19190
YP_007392820.1 NC_020203_p57 protein of an unannotated phage phrog_2432 unknown function unknown function 1 36424 36693
YP_007392783.1 NC_020203_p20 protein of an unannotated phage phrog_836 late transcriptional activator transcription regulation 1 9923 10372
YP_007392766.1 NC_020203_p3 protein of an unannotated phage phrog_2345 transcriptional regulator transcription regulation 1 1459 1893
YP_007392805.1 NC_020203_p42 protein of an unannotated phage phrog_3376 unknown function unknown function 1 22044 22211
YP_007392764.1 NC_020203_p1 protein of an unannotated phage phrog_4 transcriptional repressor transcription regulation -1 182 685
YP_007392808.1 NC_020203_p45 protein of an unannotated phage phrog_3129 unknown function unknown function 1 23082 23261
YP_007392796.1 NC_020203_p33 protein of an unannotated phage phrog_220 minor head protein and DNA pilot head and packaging 1 16830 18116
YP_007392794.1 NC_020203_p31 protein of an unannotated phage phrog_38 terminase large subunit head and packaging 1 13588 15240
YP_007392813.1 NC_020203_p50 protein of an unannotated phage phrog_687 structural protein head and packaging 1 29158 30081
YP_007392790.1 NC_020203_p27 protein of an unannotated phage phrog_1103 unknown function unknown function 1 12404 12592
YP_007392801.1 NC_020203_p38 protein of an unannotated phage phrog_10291 unknown function unknown function -1 19497 19622
YP_007392772.1 NC_020203_p9 protein of an unannotated phage phrog_2119 unknown function unknown function 1 5898 6311
YP_007392785.1 NC_020203_p22 protein of an unannotated phage phrog_1024 unknown function unknown function 1 10815 11237
YP_007392795.1 NC_020203_p32 protein of an unannotated phage phrog_113 portal protein head and packaging 1 15250 16830
YP_007392781.1 NC_020203_p18 protein of an unannotated phage phrog_34333 unknown function unknown function 1 9237 9494
YP_007392765.1 NC_020203_p2 protein of an unannotated phage phrog_769 transcriptional repressor transcription regulation 1 1100 1456
YP_007392797.1 NC_020203_p34 protein of an unannotated phage phrog_26 tail completion or Neck1 protein connector 1 18116 18583
YP_007392776.1 NC_020203_p13 protein of an unannotated phage phrog_4367 unknown function unknown function 1 7405 7713
YP_007392798.1 NC_020203_p35 protein of an unannotated phage phrog_8786 type I-E anti-CRISPR protein moron, auxiliary metabolic gene and host takeover 1 18694 18891
YP_007392817.1 NC_020203_p54 protein of an unannotated phage phrog_1196 tail assembly chaperone tail 1 32840 33058
YP_007392782.1 NC_020203_p19 protein of an unannotated phage phrog_286 unknown function unknown function 1 9529 9936
YP_007392821.1 NC_020203_p58 protein of an unannotated phage phrog_2623 unknown function unknown function 1 36772 36996
YP_007392774.1 NC_020203_p11 protein of an unannotated phage phrog_491 Mu Gam-like end protection DNA, RNA and nucleotide metabolism 1 6602 7120
YP_007392806.1 NC_020203_p43 protein of an unannotated phage phrog_195 head-tail adaptor connector 1 22208 22624
YP_007392800.1 NC_020203_p37 protein of an unannotated phage phrog_3865 unknown function unknown function 1 19177 19401