Genomic map of Xanthomonas citri phage CP2 (NC_020205)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_020205
Definition
Xanthomonas citri phage CP2 DNA, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae.
DB of origin
REFSEQ
Length
42963
Host Name
Xanthomonas citri
Host domain
Bacteria
Is prophage?
undef
Number of proteins
40
%GC
67.01
Number of singletons
3
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_007392909.1 NC_020205_p20 protein of an unannotated phage phrog_20269 unknown function unknown function 1 15292 16683
YP_007392921.1 NC_020205_p32 protein of an unannotated phage phrog_4405 unknown function unknown function -1 34225 34710
YP_007392891.1 NC_020205_p2 protein of an unannotated phage phrog_2045 unknown function unknown function 1 454 1398
YP_007392920.1 NC_020205_p31 protein of an unannotated phage phrog_322 unknown function unknown function -1 33829 34191
YP_007392926.1 NC_020205_p37 protein of an unannotated phage phrog_17928 unknown function unknown function -1 37496 39031
YP_007392908.1 NC_020205_p19 protein of an unannotated phage phrog_394 tail protein tail 1 14607 15290
YP_007392893.1 NC_020205_p4 protein of an unannotated phage phrog_140 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 2262 2717
YP_007392923.1 NC_020205_p34 protein of an unannotated phage phrog_1872 endonuclease DNA, RNA and nucleotide metabolism -1 35157 35534
YP_007392914.1 NC_020205_p25 protein of an unannotated phage phrog_9880 unknown function unknown function 1 21566 29002
YP_007392910.1 NC_020205_p21 protein of an unannotated phage phrog_15566 tail protein tail 1 16683 18395
YP_007392915.1 NC_020205_p26 protein of an unannotated phage phrog_2710 tail fiber protein tail 1 29002 30111
YP_007392906.1 NC_020205_p17 protein of an unannotated phage phrog_427 unknown function unknown function 1 13447 13893
YP_007392912.1 NC_020205_p23 protein of an unannotated phage phrog_418 internal virion protein head and packaging 1 18868 19371
YP_007392890.1 NC_020205_p1 protein of an unannotated phage phrog_9474 replication initiation protein DNA, RNA and nucleotide metabolism 1 1 231
YP_007392890.1 NC_020205_p1 protein of an unannotated phage phrog_9474 replication initiation protein DNA, RNA and nucleotide metabolism 1 42178 42963
YP_007392907.1 NC_020205_p18 protein of an unannotated phage singleton unknown function unknown function 1 13947 14537
YP_007392929.1 NC_020205_p40 protein of an unannotated phage phrog_27658 unknown function unknown function 1 41829 42176
YP_007392911.1 NC_020205_p22 protein of an unannotated phage phrog_308 internal virion protein head and packaging 1 18392 18868
YP_007392928.1 NC_020205_p39 protein of an unannotated phage phrog_204 unknown function unknown function -1 39951 40325
YP_007392894.1 NC_020205_p5 protein of an unannotated phage singleton unknown function unknown function 1 2936 3952
YP_007392900.1 NC_020205_p11 protein of an unannotated phage phrog_1482 terminase small subunit head and packaging 1 6712 7149
YP_007392913.1 NC_020205_p24 protein of an unannotated phage phrog_10475 endolysin lysis 1 19371 21563
YP_007392897.1 NC_020205_p8 protein of an unannotated phage phrog_14255 unknown function unknown function 1 5105 5662
YP_007392901.1 NC_020205_p12 protein of an unannotated phage phrog_2 terminase large subunit head and packaging 1 7289 8815
YP_007392903.1 NC_020205_p14 protein of an unannotated phage phrog_332 head-tail adaptor connector 1 9234 11294
YP_007392924.1 NC_020205_p35 protein of an unannotated phage phrog_149 exonuclease DNA, RNA and nucleotide metabolism -1 35534 36157
YP_007392917.1 NC_020205_p28 protein of an unannotated phage phrog_4176 tail fiber protein tail 1 31311 32243
YP_007392905.1 NC_020205_p16 protein of an unannotated phage phrog_212 major head protein head and packaging 1 12398 13411
YP_007392927.1 NC_020205_p38 protein of an unannotated phage phrog_210 unknown function unknown function -1 39072 39896
YP_007392916.1 NC_020205_p27 protein of an unannotated phage phrog_12940 tail fiber protein tail 1 30289 31314
YP_007392896.1 NC_020205_p7 protein of an unannotated phage phrog_13992 unknown function unknown function 1 4635 5108
YP_007392898.1 NC_020205_p9 protein of an unannotated phage phrog_11951 Rz-like spanin lysis 1 5665 5979
YP_007392919.1 NC_020205_p30 protein of an unannotated phage phrog_2831 unknown function unknown function -1 33018 33584
YP_007392899.1 NC_020205_p10 protein of an unannotated phage singleton unknown function unknown function 1 6031 6360
YP_007392904.1 NC_020205_p15 protein of an unannotated phage phrog_458 protease other 1 11629 12354
YP_007392925.1 NC_020205_p36 protein of an unannotated phage phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 36385 37227
YP_007392892.1 NC_020205_p3 protein of an unannotated phage phrog_319 NinB/ Orf homologous recombination mediator DNA, RNA and nucleotide metabolism 1 1460 1945
YP_007392922.1 NC_020205_p33 protein of an unannotated phage phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 34723 35160
YP_007392918.1 NC_020205_p29 protein of an unannotated phage phrog_4950 tail fiber protein tail 1 32233 32808
YP_007392895.1 NC_020205_p6 protein of an unannotated phage phrog_7 endolysin lysis 1 4030 4632
YP_007392902.1 NC_020205_p13 protein of an unannotated phage phrog_825 unknown function unknown function 1 8820 9158