Genomic map of Bacillus virus Andromeda (NC_020478)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_020478
Definition
Bacillus phage Andromeda, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Andromedavirus.
DB of origin
REFSEQ
Length
49259
Host Name
Bacillus pumilus
Host domain
Bacteria
Is prophage?
undef
Number of proteins
79
%GC
41.9
Number of singletons
2
Number of paralogs
3

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_007517516.1 NC_020478_p51 hypothetical protein phrog_11297 unknown function unknown function 1 35360 35527
YP_007517524.1 NC_020478_p59 hypothetical protein phrog_10817 unknown function unknown function 1 38749 39165
YP_007517468.1 NC_020478_p3 hypothetical protein phrog_11595 unknown function unknown function -1 1408 1638
YP_007517535.1 NC_020478_p70 hypothetical protein phrog_8966 unknown function unknown function 1 44332 44535
YP_007517473.1 NC_020478_p8 hypothetical protein phrog_13575 unknown function unknown function -1 2854 3111
YP_007517482.1 NC_020478_p17 hypothetical protein phrog_6865 unknown function unknown function 1 10537 10758
YP_007517497.1 NC_020478_p32 cell wall hydrolase/autolysin phrog_2742 endolysin lysis 1 22240 23139
YP_007517504.1 NC_020478_p39 hypothetical protein phrog_11036 unknown function unknown function 1 27677 28030
YP_007517491.1 NC_020478_p26 hypothetical protein phrog_10519 virion structural protein head and packaging 1 16115 18610
YP_007517509.1 NC_020478_p44 RNA polymerase sigma-70 factor phrog_1740 RNA polymerase sigma factor transcription regulation 1 32872 33552
YP_007517478.1 NC_020478_p13 hypothetical protein phrog_15889 unknown function unknown function -1 7756 7881
YP_007517495.1 NC_020478_p30 hypothetical protein phrog_12764 unknown function unknown function 1 21545 21796
YP_007517507.1 NC_020478_p42 UvrD/REP helicase phrog_69 exonuclease DNA, RNA and nucleotide metabolism 1 31475 32320
YP_007517526.1 NC_020478_p61 hypothetical protein phrog_10351 unknown function unknown function 1 39621 39854
YP_007517476.1 NC_020478_p11 hypothetical protein phrog_3517 head morphogenesis head and packaging 1 6354 7256
YP_007517512.1 NC_020478_p47 thymidylate synthase phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism 1 34038 34748
YP_007517533.1 NC_020478_p68 hypothetical protein phrog_2190 replication initiation protein DNA, RNA and nucleotide metabolism 1 43284 43835
YP_007517521.1 NC_020478_p56 hypothetical protein phrog_11220 unknown function unknown function 1 36982 37398
YP_007517489.1 NC_020478_p24 hypothetical protein phrog_9001 tail assembly chaperone tail 1 13574 13771
YP_007517527.1 NC_020478_p62 hypothetical protein phrog_10242 unknown function unknown function 1 39855 40169
YP_007517543.1 NC_020478_p78 hypothetical protein phrog_9356 unknown function unknown function 1 47990 48142
YP_007517479.1 NC_020478_p14 scaffold protein phrog_976 head maturation protease head and packaging 1 8266 9108
YP_007517513.1 NC_020478_p48 hypothetical protein phrog_25869 unknown function unknown function 1 34745 34837
YP_007517469.1 NC_020478_p4 hypothetical protein phrog_18527 unknown function unknown function -1 1643 1945
YP_007517519.1 NC_020478_p54 hypothetical protein phrog_10941 unknown function unknown function 1 36084 36398
YP_007517500.1 NC_020478_p35 hypothetical protein phrog_8542 unknown function unknown function 1 24155 25048
YP_007517488.1 NC_020478_p23 hypothetical protein phrog_9046 unknown function unknown function 1 13188 13529
YP_007517485.1 NC_020478_p20 hypothetical protein phrog_8346 unknown function unknown function 1 11609 12037
YP_007517505.1 NC_020478_p40 hypothetical protein phrog_9217 transcriptional regulator transcription regulation 1 28032 28370
YP_007517494.1 NC_020478_p29 hypothetical protein phrog_1887 tail protein tail 1 20598 21548
YP_007517540.1 NC_020478_p75 T7-like endonuclease phrog_9019 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 47140 47622
YP_007517508.1 NC_020478_p43 hypothetical protein phrog_190 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 32317 32808
YP_007517541.1 NC_020478_p76 hypothetical protein phrog_35833 unknown function unknown function 1 47628 47813
YP_007517510.1 NC_020478_p45 hypothetical protein phrog_6833 unknown function unknown function 1 33549 33806
YP_007517503.1 NC_020478_p38 primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism 1 26670 27680
YP_007517518.1 NC_020478_p53 hypothetical protein phrog_11513 DNA binding protein DNA, RNA and nucleotide metabolism 1 35831 36094
YP_007517496.1 NC_020478_p31 hypothetical protein phrog_1625 involved in bacteriocin production or immunity moron, auxiliary metabolic gene and host takeover 1 21812 22228
YP_007517528.1 NC_020478_p63 hypothetical protein phrog_4224 unknown function unknown function 1 40171 40479
YP_007517529.1 NC_020478_p64 hypothetical protein phrog_8287 unknown function unknown function 1 40479 40910
YP_007517532.1 NC_020478_p67 FtsK/SpoIIIE ATPase phrog_1358 FtsK/SpoIIIE-like protein moron, auxiliary metabolic gene and host takeover 1 42014 43297
YP_007517487.1 NC_020478_p22 hypothetical protein phrog_290 minor tail protein tail 1 12225 13163
YP_007517471.1 NC_020478_p6 hypothetical protein phrog_19598 unknown function unknown function -1 2220 2366
YP_007517539.1 NC_020478_p74 hypothetical protein phrog_17250 unknown function unknown function -1 46550 46747
YP_007517544.1 NC_020478_p79 hypothetical protein phrog_6177 unknown function unknown function 1 48472 49146
YP_007517493.1 NC_020478_p28 tailspike, beta-helical glycoside hydrolase phrog_2234 tail spike protein tail 1 18915 20585
YP_007517542.1 NC_020478_p77 hypothetical protein phrog_22357 unknown function unknown function 1 47813 47956
YP_007517475.1 NC_020478_p10 hypothetical protein phrog_113 portal protein head and packaging 1 4981 6300
YP_007517484.1 NC_020478_p19 phage virion morphogenesis protein phrog_26 tail completion or Neck1 protein connector 1 11169 11612
YP_007517534.1 NC_020478_p69 hypothetical protein phrog_5422 unknown function unknown function 1 43848 44261
YP_007517499.1 NC_020478_p34 holin phrog_11024 holin lysis 1 23613 23978
YP_007517511.1 NC_020478_p46 hypothetical protein phrog_6833 unknown function unknown function 1 33799 34038
YP_007517502.1 NC_020478_p37 helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 25400 26677
YP_007517467.1 NC_020478_p2 hypothetical protein phrog_21332 unknown function unknown function -1 1065 1346
YP_007517523.1 NC_020478_p58 hypothetical protein phrog_1905 unknown function unknown function 1 38346 38777
YP_007517536.1 NC_020478_p71 hypothetical protein phrog_10908 unknown function unknown function -1 44555 45043
YP_007517490.1 NC_020478_p25 tape measure protein phrog_58 tail length tape measure protein tail 1 13783 16101
YP_007517525.1 NC_020478_p60 hypothetical protein phrog_4224 unknown function unknown function 1 39280 39621
YP_007517474.1 NC_020478_p9 hypothetical protein phrog_675 terminase large subunit head and packaging 1 3214 4899
YP_007517470.1 NC_020478_p5 hypothetical protein phrog_10726 unknown function unknown function -1 1942 2223
YP_007517501.1 NC_020478_p36 hypothetical protein phrog_11082 unknown function unknown function 1 25054 25407
YP_007517472.1 NC_020478_p7 hypothetical protein phrog_10975 unknown function unknown function -1 2440 2748
YP_007517514.1 NC_020478_p49 hypothetical protein singleton unknown function unknown function 1 34850 34996
YP_007517517.1 NC_020478_p52 hypothetical protein phrog_14953 unknown function unknown function 1 35528 35710
YP_007517522.1 NC_020478_p57 serine-threonine kinase phrog_11167 serine-threonine kinase other 1 37546 38355
YP_007517498.1 NC_020478_p33 hypothetical protein phrog_9987 holin lysis 1 23224 23433
YP_007517466.1 NC_020478_p1 hypothetical protein phrog_6177 unknown function unknown function 1 65 739
YP_007517538.1 NC_020478_p73 hypothetical protein phrog_13742 peptidase other -1 45782 46549
YP_007517477.1 NC_020478_p12 hypothetical protein phrog_11369 unknown function unknown function -1 7289 7759
YP_007517531.1 NC_020478_p66 hypothetical protein singleton unknown function unknown function 1 41607 41795
YP_007517483.1 NC_020478_p18 hypothetical protein phrog_195 head-tail adaptor connector 1 10772 11164
YP_007517515.1 NC_020478_p50 hypothetical protein phrog_8897 unknown function unknown function 1 35010 35363
YP_007517530.1 NC_020478_p65 hypothetical protein phrog_15973 unknown function unknown function 1 41168 41452
YP_007517486.1 NC_020478_p21 hypothetical protein phrog_12043 unknown function unknown function 1 12049 12225
YP_007517481.1 NC_020478_p16 hypothetical protein phrog_1650 major head protein head and packaging 1 9572 10462
YP_007517520.1 NC_020478_p55 deoxynucleoside monophosphate kinase phrog_139 deoxynucleoside monophosphate kinase other 1 36398 36982
YP_007517506.1 NC_020478_p41 DNA polymerase III alpha subunit phrog_405 DNA polymerase DNA, RNA and nucleotide metabolism 1 28383 31472
YP_007517537.1 NC_020478_p72 DNA polymerase III epsilon subunit phrog_192 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism -1 45191 45781
YP_007517480.1 NC_020478_p15 hypothetical protein phrog_8960 head scaffolding protein head and packaging 1 9130 9552
YP_007517492.1 NC_020478_p27 hypothetical protein phrog_11128 unknown function unknown function 1 18615 18914