| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_020478 |
Definition |
Bacillus phage Andromeda, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Andromedavirus. |
DB of origin |
REFSEQ |
Length |
49259 |
Host Name |
Bacillus pumilus |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
79 |
%GC |
41.9 |
Number of singletons |
2 |
Number of paralogs |
3 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_007517516.1 | NC_020478_p51 | hypothetical protein | phrog_11297 | unknown function | unknown function | 1 | 35360 | 35527 |
| YP_007517524.1 | NC_020478_p59 | hypothetical protein | phrog_10817 | unknown function | unknown function | 1 | 38749 | 39165 |
| YP_007517468.1 | NC_020478_p3 | hypothetical protein | phrog_11595 | unknown function | unknown function | -1 | 1408 | 1638 |
| YP_007517535.1 | NC_020478_p70 | hypothetical protein | phrog_8966 | unknown function | unknown function | 1 | 44332 | 44535 |
| YP_007517473.1 | NC_020478_p8 | hypothetical protein | phrog_13575 | unknown function | unknown function | -1 | 2854 | 3111 |
| YP_007517482.1 | NC_020478_p17 | hypothetical protein | phrog_6865 | unknown function | unknown function | 1 | 10537 | 10758 |
| YP_007517497.1 | NC_020478_p32 | cell wall hydrolase/autolysin | phrog_2742 | endolysin | lysis | 1 | 22240 | 23139 |
| YP_007517504.1 | NC_020478_p39 | hypothetical protein | phrog_11036 | unknown function | unknown function | 1 | 27677 | 28030 |
| YP_007517491.1 | NC_020478_p26 | hypothetical protein | phrog_10519 | virion structural protein | head and packaging | 1 | 16115 | 18610 |
| YP_007517509.1 | NC_020478_p44 | RNA polymerase sigma-70 factor | phrog_1740 | RNA polymerase sigma factor | transcription regulation | 1 | 32872 | 33552 |
| YP_007517478.1 | NC_020478_p13 | hypothetical protein | phrog_15889 | unknown function | unknown function | -1 | 7756 | 7881 |
| YP_007517495.1 | NC_020478_p30 | hypothetical protein | phrog_12764 | unknown function | unknown function | 1 | 21545 | 21796 |
| YP_007517507.1 | NC_020478_p42 | UvrD/REP helicase | phrog_69 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 31475 | 32320 |
| YP_007517526.1 | NC_020478_p61 | hypothetical protein | phrog_10351 | unknown function | unknown function | 1 | 39621 | 39854 |
| YP_007517476.1 | NC_020478_p11 | hypothetical protein | phrog_3517 | head morphogenesis | head and packaging | 1 | 6354 | 7256 |
| YP_007517512.1 | NC_020478_p47 | thymidylate synthase | phrog_85 | thymidylate synthase | DNA, RNA and nucleotide metabolism | 1 | 34038 | 34748 |
| YP_007517533.1 | NC_020478_p68 | hypothetical protein | phrog_2190 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 43284 | 43835 |
| YP_007517521.1 | NC_020478_p56 | hypothetical protein | phrog_11220 | unknown function | unknown function | 1 | 36982 | 37398 |
| YP_007517489.1 | NC_020478_p24 | hypothetical protein | phrog_9001 | tail assembly chaperone | tail | 1 | 13574 | 13771 |
| YP_007517527.1 | NC_020478_p62 | hypothetical protein | phrog_10242 | unknown function | unknown function | 1 | 39855 | 40169 |
| YP_007517543.1 | NC_020478_p78 | hypothetical protein | phrog_9356 | unknown function | unknown function | 1 | 47990 | 48142 |
| YP_007517479.1 | NC_020478_p14 | scaffold protein | phrog_976 | head maturation protease | head and packaging | 1 | 8266 | 9108 |
| YP_007517513.1 | NC_020478_p48 | hypothetical protein | phrog_25869 | unknown function | unknown function | 1 | 34745 | 34837 |
| YP_007517469.1 | NC_020478_p4 | hypothetical protein | phrog_18527 | unknown function | unknown function | -1 | 1643 | 1945 |
| YP_007517519.1 | NC_020478_p54 | hypothetical protein | phrog_10941 | unknown function | unknown function | 1 | 36084 | 36398 |
| YP_007517500.1 | NC_020478_p35 | hypothetical protein | phrog_8542 | unknown function | unknown function | 1 | 24155 | 25048 |
| YP_007517488.1 | NC_020478_p23 | hypothetical protein | phrog_9046 | unknown function | unknown function | 1 | 13188 | 13529 |
| YP_007517485.1 | NC_020478_p20 | hypothetical protein | phrog_8346 | unknown function | unknown function | 1 | 11609 | 12037 |
| YP_007517505.1 | NC_020478_p40 | hypothetical protein | phrog_9217 | transcriptional regulator | transcription regulation | 1 | 28032 | 28370 |
| YP_007517494.1 | NC_020478_p29 | hypothetical protein | phrog_1887 | tail protein | tail | 1 | 20598 | 21548 |
| YP_007517540.1 | NC_020478_p75 | T7-like endonuclease | phrog_9019 | Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 47140 | 47622 |
| YP_007517508.1 | NC_020478_p43 | hypothetical protein | phrog_190 | Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 32317 | 32808 |
| YP_007517541.1 | NC_020478_p76 | hypothetical protein | phrog_35833 | unknown function | unknown function | 1 | 47628 | 47813 |
| YP_007517510.1 | NC_020478_p45 | hypothetical protein | phrog_6833 | unknown function | unknown function | 1 | 33549 | 33806 |
| YP_007517503.1 | NC_020478_p38 | primase | phrog_47 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 26670 | 27680 |
| YP_007517518.1 | NC_020478_p53 | hypothetical protein | phrog_11513 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 35831 | 36094 |
| YP_007517496.1 | NC_020478_p31 | hypothetical protein | phrog_1625 | involved in bacteriocin production or immunity | moron, auxiliary metabolic gene and host takeover | 1 | 21812 | 22228 |
| YP_007517528.1 | NC_020478_p63 | hypothetical protein | phrog_4224 | unknown function | unknown function | 1 | 40171 | 40479 |
| YP_007517529.1 | NC_020478_p64 | hypothetical protein | phrog_8287 | unknown function | unknown function | 1 | 40479 | 40910 |
| YP_007517532.1 | NC_020478_p67 | FtsK/SpoIIIE ATPase | phrog_1358 | FtsK/SpoIIIE-like protein | moron, auxiliary metabolic gene and host takeover | 1 | 42014 | 43297 |
| YP_007517487.1 | NC_020478_p22 | hypothetical protein | phrog_290 | minor tail protein | tail | 1 | 12225 | 13163 |
| YP_007517471.1 | NC_020478_p6 | hypothetical protein | phrog_19598 | unknown function | unknown function | -1 | 2220 | 2366 |
| YP_007517539.1 | NC_020478_p74 | hypothetical protein | phrog_17250 | unknown function | unknown function | -1 | 46550 | 46747 |
| YP_007517544.1 | NC_020478_p79 | hypothetical protein | phrog_6177 | unknown function | unknown function | 1 | 48472 | 49146 |
| YP_007517493.1 | NC_020478_p28 | tailspike, beta-helical glycoside hydrolase | phrog_2234 | tail spike protein | tail | 1 | 18915 | 20585 |
| YP_007517542.1 | NC_020478_p77 | hypothetical protein | phrog_22357 | unknown function | unknown function | 1 | 47813 | 47956 |
| YP_007517475.1 | NC_020478_p10 | hypothetical protein | phrog_113 | portal protein | head and packaging | 1 | 4981 | 6300 |
| YP_007517484.1 | NC_020478_p19 | phage virion morphogenesis protein | phrog_26 | tail completion or Neck1 protein | connector | 1 | 11169 | 11612 |
| YP_007517534.1 | NC_020478_p69 | hypothetical protein | phrog_5422 | unknown function | unknown function | 1 | 43848 | 44261 |
| YP_007517499.1 | NC_020478_p34 | holin | phrog_11024 | holin | lysis | 1 | 23613 | 23978 |
| YP_007517511.1 | NC_020478_p46 | hypothetical protein | phrog_6833 | unknown function | unknown function | 1 | 33799 | 34038 |
| YP_007517502.1 | NC_020478_p37 | helicase | phrog_19 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | 1 | 25400 | 26677 |
| YP_007517467.1 | NC_020478_p2 | hypothetical protein | phrog_21332 | unknown function | unknown function | -1 | 1065 | 1346 |
| YP_007517523.1 | NC_020478_p58 | hypothetical protein | phrog_1905 | unknown function | unknown function | 1 | 38346 | 38777 |
| YP_007517536.1 | NC_020478_p71 | hypothetical protein | phrog_10908 | unknown function | unknown function | -1 | 44555 | 45043 |
| YP_007517490.1 | NC_020478_p25 | tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 13783 | 16101 |
| YP_007517525.1 | NC_020478_p60 | hypothetical protein | phrog_4224 | unknown function | unknown function | 1 | 39280 | 39621 |
| YP_007517474.1 | NC_020478_p9 | hypothetical protein | phrog_675 | terminase large subunit | head and packaging | 1 | 3214 | 4899 |
| YP_007517470.1 | NC_020478_p5 | hypothetical protein | phrog_10726 | unknown function | unknown function | -1 | 1942 | 2223 |
| YP_007517501.1 | NC_020478_p36 | hypothetical protein | phrog_11082 | unknown function | unknown function | 1 | 25054 | 25407 |
| YP_007517472.1 | NC_020478_p7 | hypothetical protein | phrog_10975 | unknown function | unknown function | -1 | 2440 | 2748 |
| YP_007517514.1 | NC_020478_p49 | hypothetical protein | singleton | unknown function | unknown function | 1 | 34850 | 34996 |
| YP_007517517.1 | NC_020478_p52 | hypothetical protein | phrog_14953 | unknown function | unknown function | 1 | 35528 | 35710 |
| YP_007517522.1 | NC_020478_p57 | serine-threonine kinase | phrog_11167 | serine-threonine kinase | other | 1 | 37546 | 38355 |
| YP_007517498.1 | NC_020478_p33 | hypothetical protein | phrog_9987 | holin | lysis | 1 | 23224 | 23433 |
| YP_007517466.1 | NC_020478_p1 | hypothetical protein | phrog_6177 | unknown function | unknown function | 1 | 65 | 739 |
| YP_007517538.1 | NC_020478_p73 | hypothetical protein | phrog_13742 | peptidase | other | -1 | 45782 | 46549 |
| YP_007517477.1 | NC_020478_p12 | hypothetical protein | phrog_11369 | unknown function | unknown function | -1 | 7289 | 7759 |
| YP_007517531.1 | NC_020478_p66 | hypothetical protein | singleton | unknown function | unknown function | 1 | 41607 | 41795 |
| YP_007517483.1 | NC_020478_p18 | hypothetical protein | phrog_195 | head-tail adaptor | connector | 1 | 10772 | 11164 |
| YP_007517515.1 | NC_020478_p50 | hypothetical protein | phrog_8897 | unknown function | unknown function | 1 | 35010 | 35363 |
| YP_007517530.1 | NC_020478_p65 | hypothetical protein | phrog_15973 | unknown function | unknown function | 1 | 41168 | 41452 |
| YP_007517486.1 | NC_020478_p21 | hypothetical protein | phrog_12043 | unknown function | unknown function | 1 | 12049 | 12225 |
| YP_007517481.1 | NC_020478_p16 | hypothetical protein | phrog_1650 | major head protein | head and packaging | 1 | 9572 | 10462 |
| YP_007517520.1 | NC_020478_p55 | deoxynucleoside monophosphate kinase | phrog_139 | deoxynucleoside monophosphate kinase | other | 1 | 36398 | 36982 |
| YP_007517506.1 | NC_020478_p41 | DNA polymerase III alpha subunit | phrog_405 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 28383 | 31472 |
| YP_007517537.1 | NC_020478_p72 | DNA polymerase III epsilon subunit | phrog_192 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | -1 | 45191 | 45781 |
| YP_007517480.1 | NC_020478_p15 | hypothetical protein | phrog_8960 | head scaffolding protein | head and packaging | 1 | 9130 | 9552 |
| YP_007517492.1 | NC_020478_p27 | hypothetical protein | phrog_11128 | unknown function | unknown function | 1 | 18615 | 18914 |