| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_020479 |
Definition |
Bacillus phage Curly, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Andromedavirus. |
DB of origin |
REFSEQ |
Length |
49425 |
Host Name |
Bacillus pumilus |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
77 |
%GC |
41.82 |
Number of singletons |
1 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_007517571.1 | NC_020479_p27 | hypothetical protein | phrog_11128 | unknown function | unknown function | 1 | 18626 | 18946 |
| YP_007517552.1 | NC_020479_p8 | hypothetical protein | phrog_13575 | unknown function | unknown function | -1 | 2866 | 3123 |
| YP_007517550.1 | NC_020479_p6 | hypothetical protein | phrog_19598 | unknown function | unknown function | -1 | 2232 | 2378 |
| YP_007517593.1 | NC_020479_p49 | hypothetical protein | phrog_11297 | unknown function | unknown function | 1 | 35244 | 35408 |
| YP_007517545.1 | NC_020479_p1 | hypothetical protein | phrog_6177 | unknown function | unknown function | 1 | 65 | 739 |
| YP_007517577.1 | NC_020479_p33 | hypothetical protein | phrog_9987 | holin | lysis | 1 | 23249 | 23467 |
| YP_007517601.1 | NC_020479_p57 | hypothetical protein | phrog_10817 | unknown function | unknown function | 1 | 38545 | 38961 |
| YP_007517611.1 | NC_020479_p67 | hypothetical protein | phrog_5422 | unknown function | unknown function | 1 | 43917 | 44330 |
| YP_007517556.1 | NC_020479_p12 | hypothetical protein | phrog_11369 | unknown function | unknown function | -1 | 7300 | 7770 |
| YP_007517559.1 | NC_020479_p15 | hypothetical protein | phrog_8960 | head scaffolding protein | head and packaging | 1 | 9162 | 9584 |
| YP_007517573.1 | NC_020479_p29 | hypothetical protein | phrog_1887 | tail protein | tail | 1 | 20627 | 21583 |
| YP_007517610.1 | NC_020479_p66 | replication/relaxation protein | phrog_2190 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 43314 | 43904 |
| YP_007517602.1 | NC_020479_p58 | hypothetical protein | phrog_4224 | unknown function | unknown function | 1 | 39031 | 39423 |
| YP_007517569.1 | NC_020479_p25 | tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 13815 | 16133 |
| YP_007517570.1 | NC_020479_p26 | hypothetical protein | phrog_10519 | virion structural protein | head and packaging | 1 | 16147 | 18642 |
| YP_007517561.1 | NC_020479_p17 | hypothetical protein | phrog_6865 | unknown function | unknown function | 1 | 10569 | 10790 |
| YP_007517575.1 | NC_020479_p31 | hypothetical protein | phrog_1625 | involved in bacteriocin production or immunity | moron, auxiliary metabolic gene and host takeover | 1 | 21847 | 22263 |
| YP_007517582.1 | NC_020479_p38 | helicase | phrog_19 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | 1 | 25617 | 26966 |
| YP_007517621.1 | NC_020479_p77 | hypothetical protein | phrog_6177 | unknown function | unknown function | 1 | 48638 | 49312 |
| YP_007517592.1 | NC_020479_p48 | hypothetical protein | phrog_8897 | unknown function | unknown function | 1 | 34894 | 35247 |
| YP_007517580.1 | NC_020479_p36 | hypothetical protein | phrog_8542 | unknown function | unknown function | 1 | 24444 | 25337 |
| YP_007517576.1 | NC_020479_p32 | endolysin | phrog_2742 | endolysin | lysis | 1 | 22275 | 23174 |
| YP_007517613.1 | NC_020479_p69 | hypothetical protein | phrog_10908 | unknown function | unknown function | -1 | 44623 | 45111 |
| YP_007517553.1 | NC_020479_p9 | terminase | phrog_675 | terminase large subunit | head and packaging | 1 | 3225 | 4910 |
| YP_007517549.1 | NC_020479_p5 | hypothetical protein | phrog_10726 | unknown function | unknown function | -1 | 1954 | 2235 |
| YP_007517617.1 | NC_020479_p73 | T7-like endonuclease | phrog_9019 | Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 47173 | 47655 |
| YP_007517600.1 | NC_020479_p56 | hypothetical protein | phrog_1905 | unknown function | unknown function | 1 | 38142 | 38573 |
| YP_007517588.1 | NC_020479_p44 | hypothetical protein | phrog_190 | Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 32606 | 33112 |
| YP_007517574.1 | NC_020479_p30 | hypothetical protein | phrog_12764 | unknown function | unknown function | 1 | 21580 | 21831 |
| YP_007517605.1 | NC_020479_p61 | hypothetical protein | phrog_8287 | unknown function | unknown function | 1 | 39973 | 40404 |
| YP_007517572.1 | NC_020479_p28 | tailspike | phrog_2234 | tail spike protein | tail | 1 | 18947 | 20620 |
| YP_007517567.1 | NC_020479_p23 | hypothetical protein | phrog_9046 | unknown function | unknown function | 1 | 13220 | 13561 |
| YP_007517564.1 | NC_020479_p20 | hypothetical protein | phrog_8346 | unknown function | unknown function | 1 | 11641 | 12069 |
| YP_007517578.1 | NC_020479_p34 | hypothetical protein | singleton | unknown function | unknown function | 1 | 23582 | 23761 |
| YP_007517620.1 | NC_020479_p76 | hypothetical protein | phrog_9356 | unknown function | unknown function | 1 | 48144 | 48296 |
| YP_007517598.1 | NC_020479_p54 | hypothetical protein | phrog_11220 | unknown function | unknown function | 1 | 36863 | 37207 |
| YP_007517589.1 | NC_020479_p45 | RNA polymerase sigma-70 factor | phrog_1740 | RNA polymerase sigma factor | transcription regulation | 1 | 33159 | 33839 |
| YP_007517596.1 | NC_020479_p52 | hypothetical protein | phrog_10941 | unknown function | unknown function | 1 | 35965 | 36279 |
| YP_007517547.1 | NC_020479_p3 | hypothetical protein | phrog_11595 | unknown function | unknown function | -1 | 1420 | 1650 |
| YP_007517584.1 | NC_020479_p40 | hypothetical protein | phrog_11036 | unknown function | unknown function | 1 | 27936 | 28319 |
| YP_007517554.1 | NC_020479_p10 | portal protein | phrog_113 | portal protein | head and packaging | 1 | 4992 | 6311 |
| YP_007517614.1 | NC_020479_p70 | DNA polymerase III epsilon subunit | phrog_192 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | -1 | 45258 | 45848 |
| YP_007517566.1 | NC_020479_p22 | major tail protein | phrog_290 | minor tail protein | tail | 1 | 12257 | 13195 |
| YP_007517548.1 | NC_020479_p4 | hypothetical protein | phrog_18527 | unknown function | unknown function | -1 | 1655 | 1957 |
| YP_007517555.1 | NC_020479_p11 | phage head morphogenesis protein | phrog_3517 | head morphogenesis | head and packaging | 1 | 6365 | 7267 |
| YP_007517583.1 | NC_020479_p39 | primase | phrog_47 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 26959 | 27969 |
| YP_007517562.1 | NC_020479_p18 | hypothetical protein | phrog_195 | head-tail adaptor | connector | 1 | 10804 | 11196 |
| YP_007517551.1 | NC_020479_p7 | hypothetical protein | phrog_10975 | unknown function | unknown function | -1 | 2452 | 2760 |
| YP_007517579.1 | NC_020479_p35 | holin | phrog_11024 | holin | lysis | 1 | 23912 | 24277 |
| YP_007517595.1 | NC_020479_p51 | hypothetical protein | phrog_11513 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 35712 | 35975 |
| YP_007517608.1 | NC_020479_p64 | hypothetical protein | phrog_12326 | unknown function | unknown function | 1 | 41413 | 41859 |
| YP_007517558.1 | NC_020479_p14 | scaffold protein | phrog_976 | head maturation protease | head and packaging | 1 | 8298 | 9140 |
| YP_007517612.1 | NC_020479_p68 | hypothetical protein | phrog_8966 | unknown function | unknown function | 1 | 44401 | 44604 |
| YP_007517586.1 | NC_020479_p42 | DNA polymerase III alpha subunit | phrog_405 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 28672 | 31761 |
| YP_007517590.1 | NC_020479_p46 | hypothetical protein | phrog_6833 | unknown function | unknown function | 1 | 33836 | 34081 |
| YP_007517587.1 | NC_020479_p43 | UvrD/REP helicase | phrog_69 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 31764 | 32609 |
| YP_007517607.1 | NC_020479_p63 | hypothetical protein | phrog_3502 | unknown function | unknown function | 1 | 41049 | 41432 |
| YP_007517619.1 | NC_020479_p75 | hypothetical protein | phrog_13978 | unknown function | unknown function | 1 | 47952 | 48119 |
| YP_007517581.1 | NC_020479_p37 | hypothetical protein | phrog_11082 | unknown function | unknown function | 1 | 25343 | 25696 |
| YP_007517616.1 | NC_020479_p72 | hypothetical protein | phrog_17250 | unknown function | unknown function | -1 | 46586 | 46837 |
| YP_007517565.1 | NC_020479_p21 | hypothetical protein | phrog_12043 | unknown function | unknown function | 1 | 12081 | 12257 |
| YP_007517560.1 | NC_020479_p16 | major capsid protein | phrog_1650 | major head protein | head and packaging | 1 | 9604 | 10494 |
| YP_007517597.1 | NC_020479_p53 | deoxynucleoside monophosphate kinase | phrog_139 | deoxynucleoside monophosphate kinase | other | 1 | 36279 | 36863 |
| YP_007517603.1 | NC_020479_p59 | hypothetical protein | phrog_10351 | unknown function | unknown function | 1 | 39423 | 39656 |
| YP_007517557.1 | NC_020479_p13 | hypothetical protein | phrog_15889 | unknown function | unknown function | -1 | 7767 | 7892 |
| YP_007517609.1 | NC_020479_p65 | FtsK/SpoIIIE ATPase | phrog_1358 | FtsK/SpoIIIE-like protein | moron, auxiliary metabolic gene and host takeover | 1 | 42077 | 43366 |
| YP_007517599.1 | NC_020479_p55 | serine-threonine kinase | phrog_11167 | serine-threonine kinase | other | 1 | 37354 | 38151 |
| YP_007517568.1 | NC_020479_p24 | hypothetical protein | phrog_9001 | tail assembly chaperone | tail | 1 | 13606 | 13803 |
| YP_007517606.1 | NC_020479_p62 | hypothetical protein | phrog_15973 | unknown function | unknown function | 1 | 40660 | 40944 |
| YP_007517604.1 | NC_020479_p60 | hypothetical protein | phrog_10242 | unknown function | unknown function | 1 | 39657 | 39971 |
| YP_007517563.1 | NC_020479_p19 | phage virion morphogenesis protein | phrog_26 | tail completion or Neck1 protein | connector | 1 | 11201 | 11644 |
| YP_007517585.1 | NC_020479_p41 | hypothetical protein | phrog_9217 | transcriptional regulator | transcription regulation | 1 | 28321 | 28659 |
| YP_007517546.1 | NC_020479_p2 | hypothetical protein | phrog_21332 | unknown function | unknown function | -1 | 1080 | 1358 |
| YP_007517615.1 | NC_020479_p71 | hypothetical protein | phrog_13742 | peptidase | other | -1 | 45848 | 46585 |
| YP_007517591.1 | NC_020479_p47 | thymidylate synthase | phrog_85 | thymidylate synthase | DNA, RNA and nucleotide metabolism | 1 | 34081 | 34791 |
| YP_007517618.1 | NC_020479_p74 | hypothetical protein | phrog_22357 | unknown function | unknown function | 1 | 47798 | 47959 |
| YP_007517594.1 | NC_020479_p50 | hypothetical protein | phrog_14953 | unknown function | unknown function | 1 | 35409 | 35591 |