| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_020480 |
Definition |
Bacillus phage Finn, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Andromedavirus. |
DB of origin |
REFSEQ |
Length |
50161 |
Host Name |
Bacillus pumilus |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
77 |
%GC |
41.68 |
Number of singletons |
0 |
Number of paralogs |
3 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_007517660.1 | NC_020480_p39 | DNA polymerase III alpha subunit | phrog_405 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 29529 | 32609 |
| YP_007517693.1 | NC_020480_p72 | hypothetical protein | phrog_27458 | unknown function | unknown function | -1 | 47669 | 47827 |
| YP_007517679.1 | NC_020480_p58 | hypothetical protein | phrog_10242 | unknown function | unknown function | 1 | 40844 | 41161 |
| YP_007517682.1 | NC_020480_p61 | hypothetical protein | phrog_26074 | unknown function | unknown function | 1 | 41901 | 42053 |
| YP_007517676.1 | NC_020480_p55 | hypothetical protein | phrog_10817 | unknown function | unknown function | 1 | 39730 | 40146 |
| YP_007517695.1 | NC_020480_p74 | hypothetical protein | phrog_13978 | unknown function | unknown function | 1 | 48705 | 48875 |
| YP_007517667.1 | NC_020480_p46 | hypothetical protein | phrog_25869 | unknown function | unknown function | 1 | 35912 | 36001 |
| YP_007517690.1 | NC_020480_p69 | DNA polymerase III epsilon subunit | phrog_192 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | -1 | 46377 | 46967 |
| YP_007517686.1 | NC_020480_p65 | replication/relaxation protein | phrog_22495 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 44728 | 45003 |
| YP_007517687.1 | NC_020480_p66 | hypothetical protein | phrog_5422 | unknown function | unknown function | 1 | 45016 | 45429 |
| YP_007517681.1 | NC_020480_p60 | hypothetical protein | phrog_8287 | unknown function | unknown function | 1 | 41468 | 41899 |
| YP_007517623.1 | NC_020480_p2 | hypothetical protein | phrog_25154 | unknown function | unknown function | -1 | 1055 | 1273 |
| YP_007517622.1 | NC_020480_p1 | hypothetical protein | phrog_6177 | unknown function | unknown function | 1 | 66 | 740 |
| YP_007517692.1 | NC_020480_p71 | hypothetical protein | phrog_17250 | unknown function | unknown function | -1 | 47469 | 47666 |
| YP_007517633.1 | NC_020480_p12 | hypothetical protein | phrog_11369 | unknown function | unknown function | -1 | 7918 | 8400 |
| YP_007517646.1 | NC_020480_p25 | hypothetical protein | phrog_11128 | unknown function | unknown function | 1 | 19461 | 19760 |
| YP_007517669.1 | NC_020480_p48 | hypothetical protein | phrog_11297 | unknown function | unknown function | 1 | 36365 | 36532 |
| YP_007517666.1 | NC_020480_p45 | thymidylate synthase | phrog_85 | thymidylate synthase | DNA, RNA and nucleotide metabolism | 1 | 35202 | 35912 |
| YP_007517685.1 | NC_020480_p64 | FtsK/SpoIIIE ATPase | phrog_1358 | FtsK/SpoIIIE-like protein | moron, auxiliary metabolic gene and host takeover | 1 | 43182 | 44465 |
| YP_007517627.1 | NC_020480_p6 | hypothetical protein | phrog_19598 | unknown function | unknown function | -1 | 2184 | 2342 |
| YP_007517625.1 | NC_020480_p4 | hypothetical protein | phrog_11595 | unknown function | unknown function | -1 | 1621 | 1851 |
| YP_007517637.1 | NC_020480_p16 | hypothetical protein | phrog_6865 | unknown function | unknown function | 1 | 11195 | 11401 |
| YP_007517689.1 | NC_020480_p68 | hypothetical protein | phrog_10908 | unknown function | unknown function | -1 | 45726 | 46217 |
| YP_007517677.1 | NC_020480_p56 | hypothetical protein | phrog_4224 | unknown function | unknown function | 1 | 40261 | 40608 |
| YP_007517670.1 | NC_020480_p49 | hypothetical protein | phrog_11513 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 36848 | 37111 |
| YP_007517649.1 | NC_020480_p28 | hypothetical protein | phrog_26792 | unknown function | unknown function | 1 | 22353 | 22946 |
| YP_007517655.1 | NC_020480_p34 | hypothetical protein | phrog_11082 | unknown function | unknown function | 1 | 26203 | 26556 |
| YP_007517648.1 | NC_020480_p27 | hypothetical protein | phrog_1887 | tail protein | tail | 1 | 21406 | 22356 |
| YP_007517643.1 | NC_020480_p22 | hypothetical protein | phrog_9001 | tail assembly chaperone | tail | 1 | 14224 | 14448 |
| YP_007517691.1 | NC_020480_p70 | hypothetical protein | phrog_37197 | unknown function | unknown function | -1 | 46995 | 47468 |
| YP_007517662.1 | NC_020480_p41 | hypothetical protein | phrog_190 | Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 33454 | 33960 |
| YP_007517674.1 | NC_020480_p53 | serine-threonine kinase | phrog_11167 | serine-threonine kinase | other | 1 | 38521 | 39330 |
| YP_007517631.1 | NC_020480_p10 | hypothetical protein | phrog_113 | portal protein | head and packaging | 1 | 5610 | 6929 |
| YP_007517688.1 | NC_020480_p67 | hypothetical protein | phrog_8966 | unknown function | unknown function | 1 | 45503 | 45706 |
| YP_007517678.1 | NC_020480_p57 | hypothetical protein | phrog_10351 | unknown function | unknown function | 1 | 40608 | 40829 |
| YP_007517673.1 | NC_020480_p52 | hypothetical protein | phrog_11220 | unknown function | unknown function | 1 | 38000 | 38374 |
| YP_007517671.1 | NC_020480_p50 | hypothetical protein | phrog_10941 | unknown function | unknown function | 1 | 37101 | 37415 |
| YP_007517653.1 | NC_020480_p32 | holin | phrog_11024 | holin | lysis | 1 | 24774 | 25139 |
| YP_007517652.1 | NC_020480_p31 | hypothetical protein | phrog_9987 | holin | lysis | 1 | 24390 | 24599 |
| YP_007517668.1 | NC_020480_p47 | hypothetical protein | phrog_8897 | unknown function | unknown function | 1 | 36015 | 36368 |
| YP_007517639.1 | NC_020480_p18 | phage virion morphogenesis protein | phrog_26 | tail completion or Neck1 protein | connector | 1 | 11812 | 12270 |
| YP_007517675.1 | NC_020480_p54 | hypothetical protein | phrog_1905 | unknown function | unknown function | 1 | 39327 | 39758 |
| YP_007517697.1 | NC_020480_p76 | hypothetical protein | phrog_24615 | unknown function | unknown function | 1 | 49054 | 49200 |
| YP_007517629.1 | NC_020480_p8 | hypothetical protein | phrog_30371 | unknown function | unknown function | -1 | 3009 | 3518 |
| YP_007517684.1 | NC_020480_p63 | hypothetical protein | phrog_12326 | unknown function | unknown function | 1 | 42536 | 42961 |
| YP_007517641.1 | NC_020480_p20 | hypothetical protein | phrog_290 | minor tail protein | tail | 1 | 12889 | 13827 |
| YP_007517624.1 | NC_020480_p3 | hypothetical protein | phrog_21332 | unknown function | unknown function | -1 | 1275 | 1559 |
| YP_007517658.1 | NC_020480_p37 | hypothetical protein | phrog_11036 | unknown function | unknown function | 1 | 28832 | 29188 |
| YP_007517636.1 | NC_020480_p15 | hypothetical protein | phrog_1650 | major head protein | head and packaging | 1 | 10243 | 11124 |
| YP_007517626.1 | NC_020480_p5 | hypothetical protein | phrog_16606 | unknown function | unknown function | -1 | 1848 | 2159 |
| YP_007517642.1 | NC_020480_p21 | hypothetical protein | phrog_9046 | unknown function | unknown function | 1 | 13853 | 14203 |
| YP_007517672.1 | NC_020480_p51 | deoxynucleoside monophosphate kinase | phrog_139 | deoxynucleoside monophosphate kinase | other | 1 | 37416 | 38000 |
| YP_007517657.1 | NC_020480_p36 | primase | phrog_47 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 27819 | 28829 |
| YP_007517661.1 | NC_020480_p40 | CRISPR/Cas system associated protein | phrog_69 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 32612 | 33457 |
| YP_007517650.1 | NC_020480_p29 | hypothetical protein | phrog_1625 | involved in bacteriocin production or immunity | moron, auxiliary metabolic gene and host takeover | 1 | 22963 | 23379 |
| YP_007517645.1 | NC_020480_p24 | hypothetical protein | phrog_10519 | virion structural protein | head and packaging | 1 | 16959 | 19454 |
| YP_007517694.1 | NC_020480_p73 | T7-like endonuclease | phrog_9019 | Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 48219 | 48701 |
| YP_007517664.1 | NC_020480_p43 | hypothetical protein | phrog_6833 | unknown function | unknown function | 1 | 34683 | 34940 |
| YP_007517683.1 | NC_020480_p62 | hypothetical protein | phrog_15973 | unknown function | unknown function | 1 | 42155 | 42439 |
| YP_007517638.1 | NC_020480_p17 | hypothetical protein | phrog_195 | head-tail adaptor | connector | 1 | 11415 | 11807 |
| YP_007517654.1 | NC_020480_p33 | hypothetical protein | phrog_8542 | unknown function | unknown function | 1 | 25304 | 26197 |
| YP_007517665.1 | NC_020480_p44 | hypothetical protein | phrog_6833 | unknown function | unknown function | 1 | 34933 | 35202 |
| YP_007517647.1 | NC_020480_p26 | tailspike, beta-helical glycoside | phrog_2234 | tail spike protein | tail | 1 | 19760 | 21391 |
| YP_007517698.1 | NC_020480_p77 | hypothetical protein | phrog_6177 | unknown function | unknown function | 1 | 49384 | 50058 |
| YP_007517696.1 | NC_020480_p75 | hypothetical protein | phrog_9356 | unknown function | unknown function | 1 | 48900 | 49052 |
| YP_007517644.1 | NC_020480_p23 | tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 14453 | 16945 |
| YP_007517630.1 | NC_020480_p9 | terminase | phrog_675 | terminase large subunit | head and packaging | 1 | 3842 | 5527 |
| YP_007517651.1 | NC_020480_p30 | cell wall hydrolase/autolysin | phrog_2742 | endolysin | lysis | 1 | 23393 | 24304 |
| YP_007517659.1 | NC_020480_p38 | hypothetical protein | phrog_9217 | transcriptional regulator | transcription regulation | 1 | 29181 | 29516 |
| YP_007517634.1 | NC_020480_p13 | scaffold protein | phrog_976 | head maturation protease | head and packaging | 1 | 8939 | 9802 |
| YP_007517635.1 | NC_020480_p14 | hypothetical protein | phrog_8960 | head scaffolding protein | head and packaging | 1 | 9802 | 10224 |
| YP_007517628.1 | NC_020480_p7 | hypothetical protein | phrog_10975 | unknown function | unknown function | -1 | 2572 | 2802 |
| YP_007517663.1 | NC_020480_p42 | RNA polymerase sigma-70 factor | phrog_1740 | RNA polymerase sigma factor | transcription regulation | 1 | 34006 | 34686 |
| YP_007517632.1 | NC_020480_p11 | phage head morphogenesis protein | phrog_3517 | head morphogenesis | head and packaging | 1 | 6983 | 7885 |
| YP_007517640.1 | NC_020480_p19 | hypothetical protein | phrog_8346 | unknown function | unknown function | 1 | 12267 | 12701 |
| YP_007517680.1 | NC_020480_p59 | hypothetical protein | phrog_4224 | unknown function | unknown function | 1 | 41163 | 41468 |
| YP_007517656.1 | NC_020480_p35 | helicase | phrog_19 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | 1 | 26477 | 27826 |