Genomic map of Pelagibacter phage HTVC010P (NC_020481)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_020481
Definition
Pelagibacter phage HTVC010P, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae.
DB of origin
REFSEQ
Length
34892
Host Name
Candidatus Pelagibacter ubique HTCC1062
Host domain
Bacteria
Is prophage?
undef
Number of proteins
64
%GC
31.96
Number of singletons
36
Number of paralogs
4

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_007517709.1 NC_020481_p11 hypothetical protein singleton unknown function unknown function 1 7275 7499
YP_007517746.1 NC_020481_p48 hypothetical protein singleton unknown function unknown function -1 27899 28042
YP_007517748.1 NC_020481_p50 hypothetical protein singleton unknown function unknown function -1 28312 28647
YP_007517744.1 NC_020481_p46 hypothetical protein singleton unknown function unknown function -1 26998 27531
YP_007517711.1 NC_020481_p13 tail tubular protein B phrog_376 tail protein tail 1 8086 10650
YP_007517756.1 NC_020481_p58 hypothetical protein singleton unknown function unknown function 1 32494 32967
YP_007517728.1 NC_020481_p30 hypothetical protein phrog_14820 unknown function unknown function 1 21026 21679
YP_007517714.1 NC_020481_p16 hypothetical protein singleton unknown function unknown function 1 11529 12335
YP_007517735.1 NC_020481_p37 peptidase M15 phrog_894 endolysin lysis 1 24036 24521
YP_007517725.1 NC_020481_p27 hypothetical protein phrog_18673 tail fiber protein tail 1 19876 20526
YP_007517707.1 NC_020481_p9 major capsid protein phrog_3437 major head protein head and packaging 1 5896 6750
YP_007517733.1 NC_020481_p35 hypothetical protein phrog_38642 unknown function unknown function 1 23530 23724
YP_007517732.1 NC_020481_p34 hypothetical protein phrog_19893 unknown function unknown function 1 23304 23537
YP_007517722.1 NC_020481_p24 virion structural protein phrog_1276 unknown function unknown function 1 18566 18931
YP_007517750.1 NC_020481_p52 hypothetical protein singleton unknown function unknown function -1 29347 30234
YP_007517742.1 NC_020481_p44 hypothetical protein singleton unknown function unknown function 1 26418 26624
YP_007517708.1 NC_020481_p10 hypothetical protein singleton unknown function unknown function 1 6763 7260
YP_007517704.1 NC_020481_p6 hypothetical protein singleton unknown function unknown function 1 4512 4748
YP_007517712.1 NC_020481_p14 hypothetical protein phrog_4177 unknown function unknown function 1 10640 11095
YP_007517730.1 NC_020481_p32 hypothetical protein phrog_14820 unknown function unknown function 1 22367 22984
YP_007517754.1 NC_020481_p56 hypothetical protein singleton unknown function unknown function 1 31225 31605
YP_007517737.1 NC_020481_p39 hypothetical protein phrog_17967 unknown function unknown function 1 25000 25128
YP_007517715.1 NC_020481_p17 hypothetical protein singleton unknown function unknown function 1 13027 14139
YP_007517739.1 NC_020481_p41 hypothetical protein singleton unknown function unknown function 1 25569 25940
YP_007517703.1 NC_020481_p5 head-tail connector protein phrog_332 head-tail adaptor connector 1 2882 4510
YP_007517701.1 NC_020481_p3 hypothetical protein phrog_831 unknown function unknown function 1 2216 2437
YP_007517759.1 NC_020481_p61 hypothetical protein singleton unknown function unknown function -1 33357 33554
YP_007517738.1 NC_020481_p40 hypothetical protein phrog_20984 unknown function unknown function 1 25223 25585
YP_007517724.1 NC_020481_p26 hypothetical protein phrog_9114 unknown function unknown function 1 19579 19872
YP_007517713.1 NC_020481_p15 hypothetical protein singleton unknown function unknown function 1 11095 11529
YP_007517736.1 NC_020481_p38 hypothetical protein phrog_2524 unknown function unknown function 1 24531 24899
YP_007517755.1 NC_020481_p57 hypothetical protein singleton unknown function unknown function 1 31592 32278
YP_007517719.1 NC_020481_p21 hypothetical protein singleton unknown function unknown function 1 16303 16650
YP_007517718.1 NC_020481_p20 hypothetical protein singleton unknown function unknown function 1 14832 16346
YP_007517762.1 NC_020481_p64 hypothetical protein phrog_11100 unknown function unknown function -1 34223 34636
YP_007517752.1 NC_020481_p54 hypothetical protein phrog_25889 unknown function unknown function 1 30770 31051
YP_007517716.1 NC_020481_p18 hypothetical protein singleton unknown function unknown function 1 14181 14615
YP_007517743.1 NC_020481_p45 hypothetical protein singleton unknown function unknown function 1 26630 26773
YP_007517758.1 NC_020481_p60 hypothetical protein singleton unknown function unknown function -1 33170 33400
YP_007517723.1 NC_020481_p25 hypothetical protein singleton unknown function unknown function 1 19256 19579
YP_007517731.1 NC_020481_p33 hypothetical protein phrog_4912 tail fiber assembly tail 1 23011 23304
YP_007517761.1 NC_020481_p63 hypothetical protein singleton unknown function unknown function -1 33916 34098
YP_007517699.1 NC_020481_p1 hypothetical protein singleton unknown function unknown function 1 725 913
YP_007517705.1 NC_020481_p7 hypothetical protein phrog_3742 unknown function unknown function 1 4751 5632
YP_007517734.1 NC_020481_p36 hypothetical protein singleton unknown function unknown function 1 23744 24049
YP_007517729.1 NC_020481_p31 hypothetical protein phrog_14820 unknown function unknown function 1 21709 22335
YP_007517720.1 NC_020481_p22 tail fiber phrog_13893 tail protein tail 1 16666 18012
YP_007517745.1 NC_020481_p47 hypothetical protein singleton unknown function unknown function -1 27652 27915
YP_007517741.1 NC_020481_p43 hypothetical protein phrog_10346 unknown function unknown function 1 26149 26430
YP_007517757.1 NC_020481_p59 hypothetical protein singleton unknown function unknown function -1 32964 33167
YP_007517700.1 NC_020481_p2 phage terminase large subunit phrog_2 terminase large subunit head and packaging 1 942 2213
YP_007517717.1 NC_020481_p19 hypothetical protein singleton unknown function unknown function 1 14663 14920
YP_007517706.1 NC_020481_p8 hypothetical protein singleton unknown function unknown function 1 5622 5798
YP_007517747.1 NC_020481_p49 hypothetical protein singleton unknown function unknown function -1 28017 28196
YP_007517710.1 NC_020481_p12 hypothetical protein phrog_394 tail protein tail 1 7501 8082
YP_007517726.1 NC_020481_p28 hypothetical protein singleton unknown function unknown function 1 20562 20699
YP_007517721.1 NC_020481_p23 hypothetical protein singleton unknown function unknown function 1 18002 18538
YP_007517753.1 NC_020481_p55 hypothetical protein singleton unknown function unknown function 1 31048 31221
YP_007517751.1 NC_020481_p53 hypothetical protein singleton unknown function unknown function 1 30415 30801
YP_007517760.1 NC_020481_p62 hypothetical protein singleton unknown function unknown function -1 33535 33780
YP_007517740.1 NC_020481_p42 hypothetical protein phrog_24646 unknown function unknown function 1 25937 26149
YP_007517702.1 NC_020481_p4 hypothetical protein phrog_831 unknown function unknown function 1 2640 2882
YP_007517727.1 NC_020481_p29 hypothetical protein phrog_9114 unknown function unknown function 1 20708 21022
YP_007517749.1 NC_020481_p51 hypothetical protein singleton unknown function unknown function -1 28644 29357