| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_020481 |
Definition |
Pelagibacter phage HTVC010P, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae. |
DB of origin |
REFSEQ |
Length |
34892 |
Host Name |
Candidatus Pelagibacter ubique HTCC1062 |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
64 |
%GC |
31.96 |
Number of singletons |
36 |
Number of paralogs |
4 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_007517709.1 | NC_020481_p11 | hypothetical protein | singleton | unknown function | unknown function | 1 | 7275 | 7499 |
| YP_007517746.1 | NC_020481_p48 | hypothetical protein | singleton | unknown function | unknown function | -1 | 27899 | 28042 |
| YP_007517748.1 | NC_020481_p50 | hypothetical protein | singleton | unknown function | unknown function | -1 | 28312 | 28647 |
| YP_007517744.1 | NC_020481_p46 | hypothetical protein | singleton | unknown function | unknown function | -1 | 26998 | 27531 |
| YP_007517711.1 | NC_020481_p13 | tail tubular protein B | phrog_376 | tail protein | tail | 1 | 8086 | 10650 |
| YP_007517756.1 | NC_020481_p58 | hypothetical protein | singleton | unknown function | unknown function | 1 | 32494 | 32967 |
| YP_007517728.1 | NC_020481_p30 | hypothetical protein | phrog_14820 | unknown function | unknown function | 1 | 21026 | 21679 |
| YP_007517714.1 | NC_020481_p16 | hypothetical protein | singleton | unknown function | unknown function | 1 | 11529 | 12335 |
| YP_007517735.1 | NC_020481_p37 | peptidase M15 | phrog_894 | endolysin | lysis | 1 | 24036 | 24521 |
| YP_007517725.1 | NC_020481_p27 | hypothetical protein | phrog_18673 | tail fiber protein | tail | 1 | 19876 | 20526 |
| YP_007517707.1 | NC_020481_p9 | major capsid protein | phrog_3437 | major head protein | head and packaging | 1 | 5896 | 6750 |
| YP_007517733.1 | NC_020481_p35 | hypothetical protein | phrog_38642 | unknown function | unknown function | 1 | 23530 | 23724 |
| YP_007517732.1 | NC_020481_p34 | hypothetical protein | phrog_19893 | unknown function | unknown function | 1 | 23304 | 23537 |
| YP_007517722.1 | NC_020481_p24 | virion structural protein | phrog_1276 | unknown function | unknown function | 1 | 18566 | 18931 |
| YP_007517750.1 | NC_020481_p52 | hypothetical protein | singleton | unknown function | unknown function | -1 | 29347 | 30234 |
| YP_007517742.1 | NC_020481_p44 | hypothetical protein | singleton | unknown function | unknown function | 1 | 26418 | 26624 |
| YP_007517708.1 | NC_020481_p10 | hypothetical protein | singleton | unknown function | unknown function | 1 | 6763 | 7260 |
| YP_007517704.1 | NC_020481_p6 | hypothetical protein | singleton | unknown function | unknown function | 1 | 4512 | 4748 |
| YP_007517712.1 | NC_020481_p14 | hypothetical protein | phrog_4177 | unknown function | unknown function | 1 | 10640 | 11095 |
| YP_007517730.1 | NC_020481_p32 | hypothetical protein | phrog_14820 | unknown function | unknown function | 1 | 22367 | 22984 |
| YP_007517754.1 | NC_020481_p56 | hypothetical protein | singleton | unknown function | unknown function | 1 | 31225 | 31605 |
| YP_007517737.1 | NC_020481_p39 | hypothetical protein | phrog_17967 | unknown function | unknown function | 1 | 25000 | 25128 |
| YP_007517715.1 | NC_020481_p17 | hypothetical protein | singleton | unknown function | unknown function | 1 | 13027 | 14139 |
| YP_007517739.1 | NC_020481_p41 | hypothetical protein | singleton | unknown function | unknown function | 1 | 25569 | 25940 |
| YP_007517703.1 | NC_020481_p5 | head-tail connector protein | phrog_332 | head-tail adaptor | connector | 1 | 2882 | 4510 |
| YP_007517701.1 | NC_020481_p3 | hypothetical protein | phrog_831 | unknown function | unknown function | 1 | 2216 | 2437 |
| YP_007517759.1 | NC_020481_p61 | hypothetical protein | singleton | unknown function | unknown function | -1 | 33357 | 33554 |
| YP_007517738.1 | NC_020481_p40 | hypothetical protein | phrog_20984 | unknown function | unknown function | 1 | 25223 | 25585 |
| YP_007517724.1 | NC_020481_p26 | hypothetical protein | phrog_9114 | unknown function | unknown function | 1 | 19579 | 19872 |
| YP_007517713.1 | NC_020481_p15 | hypothetical protein | singleton | unknown function | unknown function | 1 | 11095 | 11529 |
| YP_007517736.1 | NC_020481_p38 | hypothetical protein | phrog_2524 | unknown function | unknown function | 1 | 24531 | 24899 |
| YP_007517755.1 | NC_020481_p57 | hypothetical protein | singleton | unknown function | unknown function | 1 | 31592 | 32278 |
| YP_007517719.1 | NC_020481_p21 | hypothetical protein | singleton | unknown function | unknown function | 1 | 16303 | 16650 |
| YP_007517718.1 | NC_020481_p20 | hypothetical protein | singleton | unknown function | unknown function | 1 | 14832 | 16346 |
| YP_007517762.1 | NC_020481_p64 | hypothetical protein | phrog_11100 | unknown function | unknown function | -1 | 34223 | 34636 |
| YP_007517752.1 | NC_020481_p54 | hypothetical protein | phrog_25889 | unknown function | unknown function | 1 | 30770 | 31051 |
| YP_007517716.1 | NC_020481_p18 | hypothetical protein | singleton | unknown function | unknown function | 1 | 14181 | 14615 |
| YP_007517743.1 | NC_020481_p45 | hypothetical protein | singleton | unknown function | unknown function | 1 | 26630 | 26773 |
| YP_007517758.1 | NC_020481_p60 | hypothetical protein | singleton | unknown function | unknown function | -1 | 33170 | 33400 |
| YP_007517723.1 | NC_020481_p25 | hypothetical protein | singleton | unknown function | unknown function | 1 | 19256 | 19579 |
| YP_007517731.1 | NC_020481_p33 | hypothetical protein | phrog_4912 | tail fiber assembly | tail | 1 | 23011 | 23304 |
| YP_007517761.1 | NC_020481_p63 | hypothetical protein | singleton | unknown function | unknown function | -1 | 33916 | 34098 |
| YP_007517699.1 | NC_020481_p1 | hypothetical protein | singleton | unknown function | unknown function | 1 | 725 | 913 |
| YP_007517705.1 | NC_020481_p7 | hypothetical protein | phrog_3742 | unknown function | unknown function | 1 | 4751 | 5632 |
| YP_007517734.1 | NC_020481_p36 | hypothetical protein | singleton | unknown function | unknown function | 1 | 23744 | 24049 |
| YP_007517729.1 | NC_020481_p31 | hypothetical protein | phrog_14820 | unknown function | unknown function | 1 | 21709 | 22335 |
| YP_007517720.1 | NC_020481_p22 | tail fiber | phrog_13893 | tail protein | tail | 1 | 16666 | 18012 |
| YP_007517745.1 | NC_020481_p47 | hypothetical protein | singleton | unknown function | unknown function | -1 | 27652 | 27915 |
| YP_007517741.1 | NC_020481_p43 | hypothetical protein | phrog_10346 | unknown function | unknown function | 1 | 26149 | 26430 |
| YP_007517757.1 | NC_020481_p59 | hypothetical protein | singleton | unknown function | unknown function | -1 | 32964 | 33167 |
| YP_007517700.1 | NC_020481_p2 | phage terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 942 | 2213 |
| YP_007517717.1 | NC_020481_p19 | hypothetical protein | singleton | unknown function | unknown function | 1 | 14663 | 14920 |
| YP_007517706.1 | NC_020481_p8 | hypothetical protein | singleton | unknown function | unknown function | 1 | 5622 | 5798 |
| YP_007517747.1 | NC_020481_p49 | hypothetical protein | singleton | unknown function | unknown function | -1 | 28017 | 28196 |
| YP_007517710.1 | NC_020481_p12 | hypothetical protein | phrog_394 | tail protein | tail | 1 | 7501 | 8082 |
| YP_007517726.1 | NC_020481_p28 | hypothetical protein | singleton | unknown function | unknown function | 1 | 20562 | 20699 |
| YP_007517721.1 | NC_020481_p23 | hypothetical protein | singleton | unknown function | unknown function | 1 | 18002 | 18538 |
| YP_007517753.1 | NC_020481_p55 | hypothetical protein | singleton | unknown function | unknown function | 1 | 31048 | 31221 |
| YP_007517751.1 | NC_020481_p53 | hypothetical protein | singleton | unknown function | unknown function | 1 | 30415 | 30801 |
| YP_007517760.1 | NC_020481_p62 | hypothetical protein | singleton | unknown function | unknown function | -1 | 33535 | 33780 |
| YP_007517740.1 | NC_020481_p42 | hypothetical protein | phrog_24646 | unknown function | unknown function | 1 | 25937 | 26149 |
| YP_007517702.1 | NC_020481_p4 | hypothetical protein | phrog_831 | unknown function | unknown function | 1 | 2640 | 2882 |
| YP_007517727.1 | NC_020481_p29 | hypothetical protein | phrog_9114 | unknown function | unknown function | 1 | 20708 | 21022 |
| YP_007517749.1 | NC_020481_p51 | hypothetical protein | singleton | unknown function | unknown function | -1 | 28644 | 29357 |