Genomic map of Prochlorococcus phage P-SSP10 (NC_020835)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_020835
Definition
Prochlorococcus phage P-SSP10 genomic sequence.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Tangaroavirus; Prochlorococcus virus PSSP10.
DB of origin
REFSEQ
Length
47325
Host Name
Prochlorococcus marinus
Host domain
Bacteria
Is prophage?
undef
Number of proteins
49
%GC
39.23
Number of singletons
2
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_007672701.1 NC_020835_p48 hypothetical protein phrog_7802 unknown function unknown function -1 44336 44647
YP_007672660.1 NC_020835_p7 tail tubular protein A phrog_446 tail protein tail -1 14628 15272
YP_007672693.1 NC_020835_p40 transaldolase phrog_440 transaldolase other -1 40906 41571
YP_007672664.1 NC_020835_p11 hypothetical protein phrog_22044 unknown function unknown function -1 17033 17287
YP_007672689.1 NC_020835_p36 hypothetical protein phrog_9309 unknown function unknown function -1 36016 36165
YP_007672680.1 NC_020835_p27 hypothetical protein phrog_24610 unknown function unknown function -1 32596 32880
YP_007672654.1 NC_020835_p1 hypothetical protein phrog_13518 unknown function unknown function -1 1 3424
YP_007672667.1 NC_020835_p14 hypothetical protein phrog_178 high light inducible protein other -1 18878 19054
YP_007672694.1 NC_020835_p41 HNH nuclease phrog_2214 HNH endonuclease DNA, RNA and nucleotide metabolism -1 41559 41888
YP_007672692.1 NC_020835_p39 DNA maturase beta subunit phrog_38 terminase large subunit head and packaging -1 39195 40928
YP_007672697.1 NC_020835_p44 hypothetical protein phrog_2738 unknown function unknown function -1 42399 42563
YP_007672663.1 NC_020835_p10 hypothetical protein phrog_23119 unknown function unknown function -1 16834 17049
YP_007672690.1 NC_020835_p37 hypothetical protein phrog_26829 unknown function unknown function -1 36860 37033
YP_007672659.1 NC_020835_p6 tubular tail protein B phrog_457 tail protein tail -1 11605 14628
YP_007672675.1 NC_020835_p22 hypothetical protein phrog_236 nucleotide kinase other -1 24553 24861
YP_007672672.1 NC_020835_p19 hypothetical protein phrog_6799 ribonucleotide reductase class Ia beta subunit DNA, RNA and nucleotide metabolism -1 22166 22885
YP_007672688.1 NC_020835_p35 hypothetical protein phrog_7365 unknown function unknown function -1 35631 35942
YP_007672662.1 NC_020835_p9 hypothetical protein phrog_1811 unknown function unknown function -1 16634 16837
YP_007672666.1 NC_020835_p13 photosystem II D1 protein phrog_182 photosystem II D1 moron, auxiliary metabolic gene and host takeover -1 17786 18862
YP_007672676.1 NC_020835_p23 hypothetical protein phrog_107 exonuclease DNA, RNA and nucleotide metabolism -1 24821 25561
YP_007672655.1 NC_020835_p2 hypothetical protein phrog_6651 internal virion protein head and packaging -1 3455 7546
YP_007672678.1 NC_020835_p25 hypothetical protein phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 29619 30191
YP_007672685.1 NC_020835_p32 hypothetical protein phrog_3842 unknown function unknown function -1 34041 34667
YP_007672682.1 NC_020835_p29 hypothetical protein phrog_22105 unknown function unknown function -1 33270 33437
YP_007672700.1 NC_020835_p47 hypothetical protein phrog_9426 unknown function unknown function -1 43957 44358
YP_007672679.1 NC_020835_p26 RNA polymerase phrog_414 RNA polymerase DNA, RNA and nucleotide metabolism -1 30191 32521
YP_007672698.1 NC_020835_p45 hypothetical protein phrog_848 unknown function unknown function -1 42660 43445
YP_007672691.1 NC_020835_p38 hypothetical protein phrog_33213 unknown function unknown function -1 37258 38979
YP_007672686.1 NC_020835_p33 hypothetical protein phrog_27005 unknown function unknown function -1 34907 35248
YP_007672677.1 NC_020835_p24 hypothetical protein singleton unknown function unknown function -1 29401 29619
YP_007672683.1 NC_020835_p30 hypothetical protein phrog_25656 unknown function unknown function -1 33437 33718
YP_007672661.1 NC_020835_p8 minor capsid protein phrog_267 major head protein head and packaging -1 15317 16468
YP_007672669.1 NC_020835_p16 head-tail connector protein phrog_449 head-tail adaptor connector -1 20074 21678
YP_007672684.1 NC_020835_p31 hypothetical protein phrog_13625 unknown function unknown function -1 33715 33996
YP_007672695.1 NC_020835_p42 hypothetical protein phrog_6437 unknown function unknown function -1 41885 42154
YP_007672665.1 NC_020835_p12 hypothetical protein phrog_417 unknown function unknown function -1 17290 17595
YP_007672656.1 NC_020835_p3 hypothetical protein phrog_28353 unknown function unknown function -1 7549 10449
YP_007672657.1 NC_020835_p4 hypothetical protein phrog_15746 internal virion protein head and packaging -1 10453 11181
YP_007672668.1 NC_020835_p15 hypothetical protein phrog_1052 head assembly head and packaging -1 19173 20069
YP_007672670.1 NC_020835_p17 hypothetical protein phrog_24981 unknown function unknown function -1 21678 22013
YP_007672699.1 NC_020835_p46 hypothetical protein phrog_721 unknown function unknown function -1 43697 44002
YP_007672671.1 NC_020835_p18 hypothetical protein phrog_4970 unknown function unknown function -1 22018 22197
YP_007672681.1 NC_020835_p28 hypothetical protein phrog_22704 unknown function unknown function -1 32837 33142
YP_007672674.1 NC_020835_p21 hypothetical protein phrog_671 nucleotide pyrophosphohydrolase other -1 24261 24659
YP_007672658.1 NC_020835_p5 hypothetical protein phrog_308 internal virion protein head and packaging -1 11166 11618
YP_007672687.1 NC_020835_p34 hypothetical protein phrog_33275 unknown function unknown function -1 35315 35599
YP_007672696.1 NC_020835_p43 hypothetical protein phrog_891 terminase small subunit head and packaging -1 42154 42399
YP_007672702.1 NC_020835_p49 hypothetical protein singleton unknown function unknown function -1 44650 47325
YP_007672673.1 NC_020835_p20 ribonucleotide reductase domain-containing protein phrog_367 ribonucleotide reductase DNA, RNA and nucleotide metabolism -1 22882 24261