Genomic map of Cellulophaga phage phiST (NC_020842)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_020842
Definition
Cellulophaga phage phiST genomic sequence.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Cbastvirus; Cellulophaga virus ST.
DB of origin
REFSEQ
Length
79114
Host Name
Cellulophaga sp. MM#3
Host domain
Bacteria
Is prophage?
undef
Number of proteins
104
%GC
30.2
Number of singletons
0
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_007673427.1 NC_020842_p45 hypothetical protein phrog_8995 phosphoribosyl transferase other -1 28218 28646
YP_007673403.1 NC_020842_p21 hypothetical protein phrog_19451 unknown function unknown function -1 9205 9612
YP_007673398.1 NC_020842_p16 hypothetical protein phrog_21778 unknown function unknown function -1 6842 7009
YP_007673454.1 NC_020842_p72 hypothetical protein phrog_20279 unknown function unknown function -1 50882 51370
YP_007673458.1 NC_020842_p76 hypothetical protein phrog_10327 hydrolase other -1 52659 56405
YP_007673443.1 NC_020842_p61 hypothetical protein phrog_21329 unknown function unknown function -1 40038 40262
YP_007673422.1 NC_020842_p40 hypothetical protein phrog_1745 DNA transfer protein other -1 22494 24119
YP_007673480.1 NC_020842_p98 hypothetical protein phrog_23938 unknown function unknown function 1 75135 75401
YP_007673452.1 NC_020842_p70 6-pyruvoyl tetrahydrobiopterin synthase phrog_2389 QueD-like 6-pyruvoyl-tetrahydropterin synthase moron, auxiliary metabolic gene and host takeover -1 49211 49705
YP_007673401.1 NC_020842_p19 hypothetical protein phrog_11666 unknown function unknown function -1 7700 7858
YP_007673400.1 NC_020842_p18 hypothetical protein phrog_21228 unknown function unknown function -1 7564 7713
YP_007673439.1 NC_020842_p57 hypothetical protein phrog_20089 unknown function unknown function -1 37697 38098
YP_007673412.1 NC_020842_p30 hypothetical protein phrog_21120 unknown function unknown function -1 16485 16913
YP_007673415.1 NC_020842_p33 hypothetical protein phrog_20977 unknown function unknown function -1 18170 18370
YP_007673429.1 NC_020842_p47 hypothetical protein phrog_21574 unknown function unknown function -1 29403 29780
YP_007673417.1 NC_020842_p35 hypothetical protein phrog_355 nucleoside 2-deoxyribosyltransferase DNA, RNA and nucleotide metabolism -1 20381 20701
YP_007673478.1 NC_020842_p96 hypothetical protein phrog_26500 unknown function unknown function 1 74606 74827
YP_007673404.1 NC_020842_p22 hypothetical protein phrog_20967 unknown function unknown function -1 9590 9790
YP_007673448.1 NC_020842_p66 hypothetical protein phrog_17812 unknown function unknown function -1 46838 47185
YP_007673482.1 NC_020842_p100 hypothetical protein phrog_20185 unknown function unknown function 1 76075 76371
YP_007673411.1 NC_020842_p29 hypothetical protein phrog_21476 unknown function unknown function -1 16004 16459
YP_007673385.1 NC_020842_p3 hypothetical protein phrog_19986 unknown function unknown function 1 1339 1500
YP_007673476.1 NC_020842_p94 hypothetical protein phrog_23411 unknown function unknown function 1 73675 73905
YP_007673440.1 NC_020842_p58 hypothetical protein phrog_19605 unknown function unknown function -1 38155 39072
YP_007673445.1 NC_020842_p63 hypothetical protein phrog_21571 unknown function unknown function -1 45347 45550
YP_007673416.1 NC_020842_p34 hypothetical protein phrog_18375 DNA primase/helicase DNA, RNA and nucleotide metabolism -1 18440 20374
YP_007673397.1 NC_020842_p15 hypothetical protein phrog_26949 unknown function unknown function -1 6688 6867
YP_007673442.1 NC_020842_p60 hypothetical protein phrog_20212 unknown function unknown function -1 39480 40019
YP_007673402.1 NC_020842_p20 phage large subunit terminase phrog_2 terminase large subunit head and packaging -1 7937 9193
YP_007673405.1 NC_020842_p23 hypothetical protein phrog_21325 virion structural protein head and packaging -1 9796 10296
YP_007673485.1 NC_020842_p103 hypothetical protein phrog_21684 unknown function unknown function 1 77391 77993
YP_007673393.1 NC_020842_p11 hypothetical protein phrog_12560 unknown function unknown function -1 5500 5925
YP_007673470.1 NC_020842_p88 hypothetical protein phrog_20921 unknown function unknown function -1 70321 70770
YP_007673383.1 NC_020842_p1 hypothetical protein phrog_20997 unknown function unknown function 1 808 1026
YP_007673387.1 NC_020842_p5 hypothetical protein phrog_19092 unknown function unknown function -1 2793 3116
YP_007673471.1 NC_020842_p89 hypothetical protein phrog_19423 unknown function unknown function -1 70788 71531
YP_007673419.1 NC_020842_p37 hypothetical protein phrog_19356 unknown function unknown function -1 21515 21733
YP_007673389.1 NC_020842_p7 hypothetical protein phrog_10841 unknown function unknown function -1 3610 4161
YP_007673426.1 NC_020842_p44 hypothetical protein phrog_139 deoxynucleoside monophosphate kinase other -1 27602 28210
YP_007673461.1 NC_020842_p79 hypothetical protein phrog_20525 virion structural protein head and packaging -1 57683 58669
YP_007673421.1 NC_020842_p39 hypothetical protein phrog_20338 unknown function unknown function -1 21947 22375
YP_007673483.1 NC_020842_p101 hypothetical protein phrog_20063 unknown function unknown function 1 76674 77087
YP_007673441.1 NC_020842_p59 hypothetical protein phrog_19869 unknown function unknown function -1 39152 39478
YP_007673394.1 NC_020842_p12 hypothetical protein phrog_20459 unknown function unknown function -1 5951 6142
YP_007673456.1 NC_020842_p74 hypothetical protein phrog_19130 unknown function unknown function -1 51891 52322
YP_007673408.1 NC_020842_p26 hypothetical protein phrog_21237 unknown function unknown function -1 11954 12235
YP_007673477.1 NC_020842_p95 hypothetical protein phrog_24766 unknown function unknown function 1 74202 74567
YP_007673447.1 NC_020842_p65 hypothetical protein phrog_19196 unknown function unknown function -1 46381 46860
YP_007673410.1 NC_020842_p28 RNA polymerase phrog_414 RNA polymerase DNA, RNA and nucleotide metabolism -1 13528 15897
YP_007673390.1 NC_020842_p8 hypothetical protein phrog_18931 unknown function unknown function -1 4542 4691
YP_007673474.1 NC_020842_p92 hypothetical protein phrog_3032 unknown function unknown function 1 72841 73167
YP_007673449.1 NC_020842_p67 hypothetical protein phrog_229 MazG-like pyrophosphatase other -1 47175 47762
YP_007673475.1 NC_020842_p93 hypothetical protein phrog_26316 unknown function unknown function 1 73394 73663
YP_007673484.1 NC_020842_p102 hypothetical protein phrog_19671 unknown function unknown function 1 77111 77416
YP_007673479.1 NC_020842_p97 hypothetical protein phrog_24429 unknown function unknown function 1 74846 75148
YP_007673473.1 NC_020842_p91 hypothetical protein phrog_19176 unknown function unknown function 1 72577 72831
YP_007673455.1 NC_020842_p73 hypothetical protein phrog_465 endolysin lysis -1 51457 51876
YP_007673459.1 NC_020842_p77 hypothetical protein phrog_21447 virion structural protein head and packaging -1 56416 56904
YP_007673406.1 NC_020842_p24 hypothetical protein phrog_11226 portal protein head and packaging -1 10289 11452
YP_007673457.1 NC_020842_p75 hypothetical protein phrog_18940 unknown function unknown function -1 52306 52614
YP_007673453.1 NC_020842_p71 hypothetical protein phrog_192 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism -1 49852 50775
YP_007673434.1 NC_020842_p52 hypothetical protein phrog_20145 unknown function unknown function -1 34515 34811
YP_007673409.1 NC_020842_p27 hypothetical protein phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism -1 12225 13229
YP_007673472.1 NC_020842_p90 hypothetical protein phrog_21560 unknown function unknown function -1 71827 72348
YP_007673414.1 NC_020842_p32 hypothetical protein phrog_21601 unknown function unknown function -1 17745 18170
YP_007673425.1 NC_020842_p43 hypothetical protein phrog_21104 unknown function unknown function -1 26923 27570
YP_007673420.1 NC_020842_p38 hypothetical protein phrog_20056 unknown function unknown function -1 21790 21942
YP_007673436.1 NC_020842_p54 hypothetical protein phrog_20748 unknown function unknown function -1 35182 35661
YP_007673446.1 NC_020842_p64 hypothetical protein phrog_20335 unknown function unknown function -1 45600 46379
YP_007673464.1 NC_020842_p82 hypothetical protein phrog_19401 virion structural protein head and packaging -1 62863 65346
YP_007673392.1 NC_020842_p10 hypothetical protein phrog_6645 unknown function unknown function -1 5106 5498
YP_007673424.1 NC_020842_p42 ribonucleoside-diphosphate reductase large subunit phrog_84 ribonucleoside-diphosphate reductase large subunit DNA, RNA and nucleotide metabolism -1 24550 26919
YP_007673481.1 NC_020842_p99 hypothetical protein phrog_21895 unknown function unknown function 1 75819 75992
YP_007673386.1 NC_020842_p4 hypothetical protein phrog_21272 unknown function unknown function -1 1682 1837
YP_007673486.1 NC_020842_p104 hypothetical protein phrog_10144 unknown function unknown function 1 78098 78253
YP_007673396.1 NC_020842_p14 hypothetical protein phrog_25532 unknown function unknown function -1 6496 6672
YP_007673431.1 NC_020842_p49 hypothetical protein phrog_20292 unknown function unknown function -1 31466 31768
YP_007673384.1 NC_020842_p2 hypothetical protein phrog_19240 unknown function unknown function 1 1103 1300
YP_007673462.1 NC_020842_p80 hypothetical protein phrog_20705 virion structural protein head and packaging -1 58737 60809
YP_007673465.1 NC_020842_p83 hypothetical protein phrog_12067 virion structural protein head and packaging -1 65347 66327
YP_007673469.1 NC_020842_p87 hypothetical protein phrog_20013 virion structural protein head and packaging -1 69878 70324
YP_007673423.1 NC_020842_p41 hypothetical protein phrog_379 DNA binding protein DNA, RNA and nucleotide metabolism -1 24119 24499
YP_007673460.1 NC_020842_p78 hypothetical protein phrog_19979 virion structural protein head and packaging -1 57040 57612
YP_007673388.1 NC_020842_p6 hypothetical protein phrog_13655 unknown function unknown function -1 3233 3400
YP_007673395.1 NC_020842_p13 hypothetical protein phrog_18929 unknown function unknown function -1 6200 6475
YP_007673418.1 NC_020842_p36 hypothetical protein phrog_20827 unknown function unknown function -1 20741 21448
YP_007673399.1 NC_020842_p17 hypothetical protein phrog_19052 unknown function unknown function -1 7232 7390
YP_007673463.1 NC_020842_p81 hypothetical protein phrog_21537 virion structural protein head and packaging -1 60812 62860
YP_007673430.1 NC_020842_p48 helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism -1 29785 31464
YP_007673433.1 NC_020842_p51 hypothetical protein phrog_77 SbcC-like subunit of palindrome specific endonuclease DNA, RNA and nucleotide metabolism -1 32356 34518
YP_007673413.1 NC_020842_p31 hypothetical protein phrog_20924 unknown function unknown function -1 17089 17649
YP_007673428.1 NC_020842_p46 hypothetical protein phrog_531 Rnase H DNA, RNA and nucleotide metabolism -1 28643 29176
YP_007673467.1 NC_020842_p85 hypothetical protein phrog_19691 virion structural protein head and packaging -1 67400 69067
YP_007673407.1 NC_020842_p25 hypothetical protein phrog_19317 unknown function unknown function -1 11502 11762
YP_007673435.1 NC_020842_p53 hypothetical protein phrog_21065 virion structural protein head and packaging -1 34804 35022
YP_007673451.1 NC_020842_p69 hypothetical protein phrog_2076 QueE-like radical SAM domain moron, auxiliary metabolic gene and host takeover -1 48445 49221
YP_007673468.1 NC_020842_p86 hypothetical protein phrog_21534 unknown function unknown function -1 69432 69881
YP_007673444.1 NC_020842_p62 hypothetical protein phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism -1 40460 41524
YP_007673432.1 NC_020842_p50 hypothetical protein phrog_1770 Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 31771 32355
YP_007673438.1 NC_020842_p56 hypothetical protein phrog_100 SbcD-like subunit of palindrome specific endonuclease DNA, RNA and nucleotide metabolism -1 36672 37697
YP_007673466.1 NC_020842_p84 hypothetical protein phrog_12067 virion structural protein head and packaging -1 66324 67376
YP_007673391.1 NC_020842_p9 hypothetical protein phrog_21048 unknown function unknown function -1 4744 4953
YP_007673437.1 NC_020842_p55 recombinase A phrog_97 UvsX-like recombinase other -1 35700 36671
YP_007673450.1 NC_020842_p68 GTP cyclohydrolase phrog_2197 GTP cyclohydrolase other -1 47725 48384