| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_020842 |
Definition |
Cellulophaga phage phiST genomic sequence. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Cbastvirus; Cellulophaga virus ST. |
DB of origin |
REFSEQ |
Length |
79114 |
Host Name |
Cellulophaga sp. MM#3 |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
104 |
%GC |
30.2 |
Number of singletons |
0 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_007673427.1 | NC_020842_p45 | hypothetical protein | phrog_8995 | phosphoribosyl transferase | other | -1 | 28218 | 28646 |
| YP_007673403.1 | NC_020842_p21 | hypothetical protein | phrog_19451 | unknown function | unknown function | -1 | 9205 | 9612 |
| YP_007673398.1 | NC_020842_p16 | hypothetical protein | phrog_21778 | unknown function | unknown function | -1 | 6842 | 7009 |
| YP_007673454.1 | NC_020842_p72 | hypothetical protein | phrog_20279 | unknown function | unknown function | -1 | 50882 | 51370 |
| YP_007673458.1 | NC_020842_p76 | hypothetical protein | phrog_10327 | hydrolase | other | -1 | 52659 | 56405 |
| YP_007673443.1 | NC_020842_p61 | hypothetical protein | phrog_21329 | unknown function | unknown function | -1 | 40038 | 40262 |
| YP_007673422.1 | NC_020842_p40 | hypothetical protein | phrog_1745 | DNA transfer protein | other | -1 | 22494 | 24119 |
| YP_007673480.1 | NC_020842_p98 | hypothetical protein | phrog_23938 | unknown function | unknown function | 1 | 75135 | 75401 |
| YP_007673452.1 | NC_020842_p70 | 6-pyruvoyl tetrahydrobiopterin synthase | phrog_2389 | QueD-like 6-pyruvoyl-tetrahydropterin synthase | moron, auxiliary metabolic gene and host takeover | -1 | 49211 | 49705 |
| YP_007673401.1 | NC_020842_p19 | hypothetical protein | phrog_11666 | unknown function | unknown function | -1 | 7700 | 7858 |
| YP_007673400.1 | NC_020842_p18 | hypothetical protein | phrog_21228 | unknown function | unknown function | -1 | 7564 | 7713 |
| YP_007673439.1 | NC_020842_p57 | hypothetical protein | phrog_20089 | unknown function | unknown function | -1 | 37697 | 38098 |
| YP_007673412.1 | NC_020842_p30 | hypothetical protein | phrog_21120 | unknown function | unknown function | -1 | 16485 | 16913 |
| YP_007673415.1 | NC_020842_p33 | hypothetical protein | phrog_20977 | unknown function | unknown function | -1 | 18170 | 18370 |
| YP_007673429.1 | NC_020842_p47 | hypothetical protein | phrog_21574 | unknown function | unknown function | -1 | 29403 | 29780 |
| YP_007673417.1 | NC_020842_p35 | hypothetical protein | phrog_355 | nucleoside 2-deoxyribosyltransferase | DNA, RNA and nucleotide metabolism | -1 | 20381 | 20701 |
| YP_007673478.1 | NC_020842_p96 | hypothetical protein | phrog_26500 | unknown function | unknown function | 1 | 74606 | 74827 |
| YP_007673404.1 | NC_020842_p22 | hypothetical protein | phrog_20967 | unknown function | unknown function | -1 | 9590 | 9790 |
| YP_007673448.1 | NC_020842_p66 | hypothetical protein | phrog_17812 | unknown function | unknown function | -1 | 46838 | 47185 |
| YP_007673482.1 | NC_020842_p100 | hypothetical protein | phrog_20185 | unknown function | unknown function | 1 | 76075 | 76371 |
| YP_007673411.1 | NC_020842_p29 | hypothetical protein | phrog_21476 | unknown function | unknown function | -1 | 16004 | 16459 |
| YP_007673385.1 | NC_020842_p3 | hypothetical protein | phrog_19986 | unknown function | unknown function | 1 | 1339 | 1500 |
| YP_007673476.1 | NC_020842_p94 | hypothetical protein | phrog_23411 | unknown function | unknown function | 1 | 73675 | 73905 |
| YP_007673440.1 | NC_020842_p58 | hypothetical protein | phrog_19605 | unknown function | unknown function | -1 | 38155 | 39072 |
| YP_007673445.1 | NC_020842_p63 | hypothetical protein | phrog_21571 | unknown function | unknown function | -1 | 45347 | 45550 |
| YP_007673416.1 | NC_020842_p34 | hypothetical protein | phrog_18375 | DNA primase/helicase | DNA, RNA and nucleotide metabolism | -1 | 18440 | 20374 |
| YP_007673397.1 | NC_020842_p15 | hypothetical protein | phrog_26949 | unknown function | unknown function | -1 | 6688 | 6867 |
| YP_007673442.1 | NC_020842_p60 | hypothetical protein | phrog_20212 | unknown function | unknown function | -1 | 39480 | 40019 |
| YP_007673402.1 | NC_020842_p20 | phage large subunit terminase | phrog_2 | terminase large subunit | head and packaging | -1 | 7937 | 9193 |
| YP_007673405.1 | NC_020842_p23 | hypothetical protein | phrog_21325 | virion structural protein | head and packaging | -1 | 9796 | 10296 |
| YP_007673485.1 | NC_020842_p103 | hypothetical protein | phrog_21684 | unknown function | unknown function | 1 | 77391 | 77993 |
| YP_007673393.1 | NC_020842_p11 | hypothetical protein | phrog_12560 | unknown function | unknown function | -1 | 5500 | 5925 |
| YP_007673470.1 | NC_020842_p88 | hypothetical protein | phrog_20921 | unknown function | unknown function | -1 | 70321 | 70770 |
| YP_007673383.1 | NC_020842_p1 | hypothetical protein | phrog_20997 | unknown function | unknown function | 1 | 808 | 1026 |
| YP_007673387.1 | NC_020842_p5 | hypothetical protein | phrog_19092 | unknown function | unknown function | -1 | 2793 | 3116 |
| YP_007673471.1 | NC_020842_p89 | hypothetical protein | phrog_19423 | unknown function | unknown function | -1 | 70788 | 71531 |
| YP_007673419.1 | NC_020842_p37 | hypothetical protein | phrog_19356 | unknown function | unknown function | -1 | 21515 | 21733 |
| YP_007673389.1 | NC_020842_p7 | hypothetical protein | phrog_10841 | unknown function | unknown function | -1 | 3610 | 4161 |
| YP_007673426.1 | NC_020842_p44 | hypothetical protein | phrog_139 | deoxynucleoside monophosphate kinase | other | -1 | 27602 | 28210 |
| YP_007673461.1 | NC_020842_p79 | hypothetical protein | phrog_20525 | virion structural protein | head and packaging | -1 | 57683 | 58669 |
| YP_007673421.1 | NC_020842_p39 | hypothetical protein | phrog_20338 | unknown function | unknown function | -1 | 21947 | 22375 |
| YP_007673483.1 | NC_020842_p101 | hypothetical protein | phrog_20063 | unknown function | unknown function | 1 | 76674 | 77087 |
| YP_007673441.1 | NC_020842_p59 | hypothetical protein | phrog_19869 | unknown function | unknown function | -1 | 39152 | 39478 |
| YP_007673394.1 | NC_020842_p12 | hypothetical protein | phrog_20459 | unknown function | unknown function | -1 | 5951 | 6142 |
| YP_007673456.1 | NC_020842_p74 | hypothetical protein | phrog_19130 | unknown function | unknown function | -1 | 51891 | 52322 |
| YP_007673408.1 | NC_020842_p26 | hypothetical protein | phrog_21237 | unknown function | unknown function | -1 | 11954 | 12235 |
| YP_007673477.1 | NC_020842_p95 | hypothetical protein | phrog_24766 | unknown function | unknown function | 1 | 74202 | 74567 |
| YP_007673447.1 | NC_020842_p65 | hypothetical protein | phrog_19196 | unknown function | unknown function | -1 | 46381 | 46860 |
| YP_007673410.1 | NC_020842_p28 | RNA polymerase | phrog_414 | RNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 13528 | 15897 |
| YP_007673390.1 | NC_020842_p8 | hypothetical protein | phrog_18931 | unknown function | unknown function | -1 | 4542 | 4691 |
| YP_007673474.1 | NC_020842_p92 | hypothetical protein | phrog_3032 | unknown function | unknown function | 1 | 72841 | 73167 |
| YP_007673449.1 | NC_020842_p67 | hypothetical protein | phrog_229 | MazG-like pyrophosphatase | other | -1 | 47175 | 47762 |
| YP_007673475.1 | NC_020842_p93 | hypothetical protein | phrog_26316 | unknown function | unknown function | 1 | 73394 | 73663 |
| YP_007673484.1 | NC_020842_p102 | hypothetical protein | phrog_19671 | unknown function | unknown function | 1 | 77111 | 77416 |
| YP_007673479.1 | NC_020842_p97 | hypothetical protein | phrog_24429 | unknown function | unknown function | 1 | 74846 | 75148 |
| YP_007673473.1 | NC_020842_p91 | hypothetical protein | phrog_19176 | unknown function | unknown function | 1 | 72577 | 72831 |
| YP_007673455.1 | NC_020842_p73 | hypothetical protein | phrog_465 | endolysin | lysis | -1 | 51457 | 51876 |
| YP_007673459.1 | NC_020842_p77 | hypothetical protein | phrog_21447 | virion structural protein | head and packaging | -1 | 56416 | 56904 |
| YP_007673406.1 | NC_020842_p24 | hypothetical protein | phrog_11226 | portal protein | head and packaging | -1 | 10289 | 11452 |
| YP_007673457.1 | NC_020842_p75 | hypothetical protein | phrog_18940 | unknown function | unknown function | -1 | 52306 | 52614 |
| YP_007673453.1 | NC_020842_p71 | hypothetical protein | phrog_192 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | -1 | 49852 | 50775 |
| YP_007673434.1 | NC_020842_p52 | hypothetical protein | phrog_20145 | unknown function | unknown function | -1 | 34515 | 34811 |
| YP_007673409.1 | NC_020842_p27 | hypothetical protein | phrog_85 | thymidylate synthase | DNA, RNA and nucleotide metabolism | -1 | 12225 | 13229 |
| YP_007673472.1 | NC_020842_p90 | hypothetical protein | phrog_21560 | unknown function | unknown function | -1 | 71827 | 72348 |
| YP_007673414.1 | NC_020842_p32 | hypothetical protein | phrog_21601 | unknown function | unknown function | -1 | 17745 | 18170 |
| YP_007673425.1 | NC_020842_p43 | hypothetical protein | phrog_21104 | unknown function | unknown function | -1 | 26923 | 27570 |
| YP_007673420.1 | NC_020842_p38 | hypothetical protein | phrog_20056 | unknown function | unknown function | -1 | 21790 | 21942 |
| YP_007673436.1 | NC_020842_p54 | hypothetical protein | phrog_20748 | unknown function | unknown function | -1 | 35182 | 35661 |
| YP_007673446.1 | NC_020842_p64 | hypothetical protein | phrog_20335 | unknown function | unknown function | -1 | 45600 | 46379 |
| YP_007673464.1 | NC_020842_p82 | hypothetical protein | phrog_19401 | virion structural protein | head and packaging | -1 | 62863 | 65346 |
| YP_007673392.1 | NC_020842_p10 | hypothetical protein | phrog_6645 | unknown function | unknown function | -1 | 5106 | 5498 |
| YP_007673424.1 | NC_020842_p42 | ribonucleoside-diphosphate reductase large subunit | phrog_84 | ribonucleoside-diphosphate reductase large subunit | DNA, RNA and nucleotide metabolism | -1 | 24550 | 26919 |
| YP_007673481.1 | NC_020842_p99 | hypothetical protein | phrog_21895 | unknown function | unknown function | 1 | 75819 | 75992 |
| YP_007673386.1 | NC_020842_p4 | hypothetical protein | phrog_21272 | unknown function | unknown function | -1 | 1682 | 1837 |
| YP_007673486.1 | NC_020842_p104 | hypothetical protein | phrog_10144 | unknown function | unknown function | 1 | 78098 | 78253 |
| YP_007673396.1 | NC_020842_p14 | hypothetical protein | phrog_25532 | unknown function | unknown function | -1 | 6496 | 6672 |
| YP_007673431.1 | NC_020842_p49 | hypothetical protein | phrog_20292 | unknown function | unknown function | -1 | 31466 | 31768 |
| YP_007673384.1 | NC_020842_p2 | hypothetical protein | phrog_19240 | unknown function | unknown function | 1 | 1103 | 1300 |
| YP_007673462.1 | NC_020842_p80 | hypothetical protein | phrog_20705 | virion structural protein | head and packaging | -1 | 58737 | 60809 |
| YP_007673465.1 | NC_020842_p83 | hypothetical protein | phrog_12067 | virion structural protein | head and packaging | -1 | 65347 | 66327 |
| YP_007673469.1 | NC_020842_p87 | hypothetical protein | phrog_20013 | virion structural protein | head and packaging | -1 | 69878 | 70324 |
| YP_007673423.1 | NC_020842_p41 | hypothetical protein | phrog_379 | DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 24119 | 24499 |
| YP_007673460.1 | NC_020842_p78 | hypothetical protein | phrog_19979 | virion structural protein | head and packaging | -1 | 57040 | 57612 |
| YP_007673388.1 | NC_020842_p6 | hypothetical protein | phrog_13655 | unknown function | unknown function | -1 | 3233 | 3400 |
| YP_007673395.1 | NC_020842_p13 | hypothetical protein | phrog_18929 | unknown function | unknown function | -1 | 6200 | 6475 |
| YP_007673418.1 | NC_020842_p36 | hypothetical protein | phrog_20827 | unknown function | unknown function | -1 | 20741 | 21448 |
| YP_007673399.1 | NC_020842_p17 | hypothetical protein | phrog_19052 | unknown function | unknown function | -1 | 7232 | 7390 |
| YP_007673463.1 | NC_020842_p81 | hypothetical protein | phrog_21537 | virion structural protein | head and packaging | -1 | 60812 | 62860 |
| YP_007673430.1 | NC_020842_p48 | helicase | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 29785 | 31464 |
| YP_007673433.1 | NC_020842_p51 | hypothetical protein | phrog_77 | SbcC-like subunit of palindrome specific endonuclease | DNA, RNA and nucleotide metabolism | -1 | 32356 | 34518 |
| YP_007673413.1 | NC_020842_p31 | hypothetical protein | phrog_20924 | unknown function | unknown function | -1 | 17089 | 17649 |
| YP_007673428.1 | NC_020842_p46 | hypothetical protein | phrog_531 | Rnase H | DNA, RNA and nucleotide metabolism | -1 | 28643 | 29176 |
| YP_007673467.1 | NC_020842_p85 | hypothetical protein | phrog_19691 | virion structural protein | head and packaging | -1 | 67400 | 69067 |
| YP_007673407.1 | NC_020842_p25 | hypothetical protein | phrog_19317 | unknown function | unknown function | -1 | 11502 | 11762 |
| YP_007673435.1 | NC_020842_p53 | hypothetical protein | phrog_21065 | virion structural protein | head and packaging | -1 | 34804 | 35022 |
| YP_007673451.1 | NC_020842_p69 | hypothetical protein | phrog_2076 | QueE-like radical SAM domain | moron, auxiliary metabolic gene and host takeover | -1 | 48445 | 49221 |
| YP_007673468.1 | NC_020842_p86 | hypothetical protein | phrog_21534 | unknown function | unknown function | -1 | 69432 | 69881 |
| YP_007673444.1 | NC_020842_p62 | hypothetical protein | phrog_114 | ATP-dependent DNA ligase | DNA, RNA and nucleotide metabolism | -1 | 40460 | 41524 |
| YP_007673432.1 | NC_020842_p50 | hypothetical protein | phrog_1770 | Holliday junction resolvase | DNA, RNA and nucleotide metabolism | -1 | 31771 | 32355 |
| YP_007673438.1 | NC_020842_p56 | hypothetical protein | phrog_100 | SbcD-like subunit of palindrome specific endonuclease | DNA, RNA and nucleotide metabolism | -1 | 36672 | 37697 |
| YP_007673466.1 | NC_020842_p84 | hypothetical protein | phrog_12067 | virion structural protein | head and packaging | -1 | 66324 | 67376 |
| YP_007673391.1 | NC_020842_p9 | hypothetical protein | phrog_21048 | unknown function | unknown function | -1 | 4744 | 4953 |
| YP_007673437.1 | NC_020842_p55 | recombinase A | phrog_97 | UvsX-like recombinase | other | -1 | 35700 | 36671 |
| YP_007673450.1 | NC_020842_p68 | GTP cyclohydrolase | phrog_2197 | GTP cyclohydrolase | other | -1 | 47725 | 48384 |