Genomic map of Prochlorococcus phage MED4-184 (NC_020847)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_020847
Definition
Cyanophage MED4-184 genomic sequence.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
38327
Host Name
Prochlorococcus marinus MED4
Host domain
Bacteria
Is prophage?
undef
Number of proteins
59
%GC
37.15
Number of singletons
2
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_007674059.1 NC_020847_p23 hypothetical protein singleton unknown function unknown function -1 11168 11380
YP_007674042.1 NC_020847_p6 hypothetical protein phrog_568 plasmid stability DNA, RNA and nucleotide metabolism 1 3331 3567
YP_007674082.1 NC_020847_p46 hypothetical protein phrog_247 major head protein head and packaging 1 25491 26528
YP_007674037.1 NC_020847_p1 hypothetical protein singleton unknown function unknown function 1 211 555
YP_007674094.1 NC_020847_p58 hypothetical protein phrog_18 minor tail protein tail 1 33137 33709
YP_007674039.1 NC_020847_p3 hypothetical protein phrog_9114 unknown function unknown function 1 2331 2663
YP_007674070.1 NC_020847_p34 hypothetical protein phrog_28597 unknown function unknown function 1 16431 17132
YP_007674085.1 NC_020847_p49 hypothetical protein phrog_34166 unknown function unknown function 1 27574 27819
YP_007674091.1 NC_020847_p55 hypothetical protein phrog_20784 unknown function unknown function 1 29678 30031
YP_007674044.1 NC_020847_p8 hypothetical protein phrog_1755 unknown function unknown function -1 4344 4931
YP_007674071.1 NC_020847_p35 hypothetical protein phrog_6059 queuine tRNA-ribosyltransferase moron, auxiliary metabolic gene and host takeover 1 17129 17914
YP_007674075.1 NC_020847_p39 hypothetical protein phrog_241 head morphogenesis head and packaging 1 21041 23326
YP_007674047.1 NC_020847_p11 hypothetical protein phrog_21865 unknown function unknown function -1 5866 6105
YP_007674051.1 NC_020847_p15 hypothetical protein phrog_66 excisionase and transcriptional regulator integration and excision -1 7078 7302
YP_007674081.1 NC_020847_p45 hypothetical protein phrog_206 head scaffolding protein head and packaging 1 24751 25422
YP_007674041.1 NC_020847_p5 hypothetical protein phrog_20003 unknown function unknown function 1 3025 3204
YP_007674048.1 NC_020847_p12 hypothetical protein phrog_2738 unknown function unknown function 1 6171 6335
YP_007674084.1 NC_020847_p48 hypothetical protein phrog_477 head-tail adaptor Ad1 connector 1 27017 27577
YP_007674092.1 NC_020847_p56 tail tape measure protein phrog_991 tail length tape measure protein tail 1 30232 32562
YP_007674061.1 NC_020847_p25 hypothetical protein phrog_28298 unknown function unknown function 1 12588 12794
YP_007674093.1 NC_020847_p57 hypothetical protein phrog_14 minor tail protein tail 1 32565 33137
YP_007674052.1 NC_020847_p16 hypothetical protein phrog_21418 unknown function unknown function -1 7299 7922
YP_007674065.1 NC_020847_p29 hypothetical protein phrog_34258 unknown function unknown function 1 13647 13799
YP_007674079.1 NC_020847_p43 hypothetical protein phrog_31838 unknown function unknown function 1 24284 24439
YP_007674088.1 NC_020847_p52 hypothetical protein phrog_179 tail terminator connector 1 28623 29045
YP_007674078.1 NC_020847_p42 hypothetical protein phrog_28338 unknown function unknown function 1 24018 24287
YP_007674074.1 NC_020847_p38 hypothetical protein phrog_145 portal protein head and packaging 1 19688 21037
YP_007674076.1 NC_020847_p40 hypothetical protein phrog_36872 unknown function unknown function 1 23323 23514
YP_007674067.1 NC_020847_p31 hypothetical protein phrog_270 replication initiation protein DNA, RNA and nucleotide metabolism 1 14354 15121
YP_007674058.1 NC_020847_p22 hypothetical protein phrog_5643 unknown function unknown function -1 10936 11175
YP_007674073.1 NC_020847_p37 hypothetical protein phrog_2 terminase large subunit head and packaging 1 18234 19577
YP_007674086.1 NC_020847_p50 hypothetical protein phrog_161 head closure Hc1 connector 1 27816 28169
YP_007674062.1 NC_020847_p26 hypothetical protein phrog_336 unknown function unknown function 1 12775 12966
YP_007674055.1 NC_020847_p19 hypothetical protein phrog_34479 unknown function unknown function -1 9738 10133
YP_007674068.1 NC_020847_p32 hypothetical protein phrog_35089 unknown function unknown function 1 15126 15599
YP_007674045.1 NC_020847_p9 hypothetical protein phrog_650 unknown function unknown function -1 4921 5358
YP_007674090.1 NC_020847_p54 hypothetical protein phrog_10528 major tail protein tail 1 29230 29649
YP_007674054.1 NC_020847_p18 exonuclease phrog_412 exonuclease VIII DNA, RNA and nucleotide metabolism -1 8778 9593
YP_007674063.1 NC_020847_p27 hypothetical protein phrog_35258 unknown function unknown function 1 13039 13380
YP_007674095.1 NC_020847_p59 hypothetical protein phrog_35166 unknown function unknown function 1 33706 34674
YP_007674057.1 NC_020847_p21 hypothetical protein phrog_30520 unknown function unknown function -1 10590 10811
YP_007674049.1 NC_020847_p13 hypothetical protein phrog_30071 unknown function unknown function 1 6317 6610
YP_007674060.1 NC_020847_p24 hypothetical protein phrog_36669 unknown function unknown function 1 11584 12588
YP_007674080.1 NC_020847_p44 hypothetical protein phrog_7595 unknown function unknown function 1 24436 24714
YP_007674053.1 NC_020847_p17 hypothetical protein phrog_5931 unknown function unknown function -1 7919 8785
YP_007674069.1 NC_020847_p33 DNA methylase phrog_9353 unknown function unknown function 1 15790 16431
YP_007674066.1 NC_020847_p30 hypothetical protein phrog_140 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 13899 14348
YP_007674083.1 NC_020847_p47 hypothetical protein phrog_18251 unknown function unknown function 1 26531 26896
YP_007674077.1 NC_020847_p41 hypothetical protein phrog_38321 unknown function unknown function 1 23840 24052
YP_007674089.1 NC_020847_p53 hypothetical protein phrog_38229 unknown function unknown function 1 29048 29200
YP_007674087.1 NC_020847_p51 hypothetical protein phrog_169 tail completion or Neck1 protein connector 1 28171 28623
YP_007674072.1 NC_020847_p36 hypothetical protein phrog_34910 unknown function unknown function 1 17914 18237
YP_007674056.1 NC_020847_p20 hypothetical protein phrog_35402 unknown function unknown function -1 10130 10597
YP_007674046.1 NC_020847_p10 hypothetical protein phrog_564 unknown function unknown function -1 5351 5869
YP_007674064.1 NC_020847_p28 hypothetical protein phrog_35960 unknown function unknown function 1 13370 13582
YP_007674038.1 NC_020847_p2 hypothetical protein phrog_29834 unknown function unknown function 1 589 2334
YP_007674043.1 NC_020847_p7 hypothetical protein phrog_570 unknown function unknown function 1 3568 4215
YP_007674050.1 NC_020847_p14 hypothetical protein phrog_37725 unknown function unknown function -1 6755 7075
YP_007674040.1 NC_020847_p4 hypothetical protein phrog_7802 unknown function unknown function 1 2687 3022