Genomic map of Vibrio phage VBP47 (NC_020848)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_020848
Definition
Vibrio phage VBP47 genomic sequence.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae.
DB of origin
REFSEQ
Length
76705
Host Name
Vibrio parahaemolyticus
Host domain
Bacteria
Is prophage?
undef
Number of proteins
115
%GC
42.45
Number of singletons
1
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_007674175.1 NC_020848_p80 hypothetical protein phrog_31527 unknown function unknown function 1 64354 64521
YP_007674106.1 NC_020848_p11 hypothetical protein phrog_729 cold shock protein other 1 5066 5278
YP_007674196.1 NC_020848_p101 hypothetical protein phrog_314 homing endonuclease DNA, RNA and nucleotide metabolism 1 70982 71689
YP_007674148.1 NC_020848_p53 hypothetical protein phrog_2346 unknown function unknown function -1 45192 45533
YP_007674121.1 NC_020848_p26 hypothetical protein phrog_236 nucleotide kinase other 1 14611 14877
YP_007674116.1 NC_020848_p21 hypothetical protein phrog_26431 unknown function unknown function 1 10779 11030
YP_007674206.1 NC_020848_p111 hypothetical protein phrog_30485 unknown function unknown function 1 75198 75467
YP_007674118.1 NC_020848_p23 hypothetical protein phrog_22623 unknown function unknown function 1 11326 11661
YP_007674153.1 NC_020848_p58 hypothetical protein phrog_19043 unknown function unknown function -1 49401 49700
YP_007674102.1 NC_020848_p7 hypothetical protein phrog_3118 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2963 3322
YP_007674190.1 NC_020848_p95 hypothetical protein phrog_25095 unknown function unknown function 1 68433 68711
YP_007674141.1 NC_020848_p46 hypothetical protein phrog_20377 unknown function unknown function -1 37511 38374
YP_007674128.1 NC_020848_p33 hypothetical protein phrog_35441 unknown function unknown function 1 18724 19002
YP_007674174.1 NC_020848_p79 hypothetical protein phrog_37661 unknown function unknown function 1 64116 64361
YP_007674209.1 NC_020848_p114 hypothetical protein phrog_21573 unknown function unknown function 1 76278 76505
YP_007674156.1 NC_020848_p61 hypothetical protein phrog_17691 unknown function unknown function -1 52564 53007
YP_007674137.1 NC_020848_p42 hypothetical protein phrog_159 RuvC-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 26459 26983
YP_007674107.1 NC_020848_p12 hypothetical protein phrog_26125 unknown function unknown function 1 5279 5434
YP_007674117.1 NC_020848_p22 hypothetical protein phrog_20260 unknown function unknown function 1 11045 11308
YP_007674147.1 NC_020848_p52 hypothetical protein phrog_2120 tail length tape measure protein tail -1 44047 45192
YP_007674195.1 NC_020848_p100 hypothetical protein phrog_2166 N4-like RNA polymerase DNA, RNA and nucleotide metabolism 1 69925 70926
YP_007674165.1 NC_020848_p70 hypothetical protein phrog_25968 unknown function unknown function 1 61799 61975
YP_007674160.1 NC_020848_p65 hypothetical protein phrog_33980 unknown function unknown function -1 59024 59305
YP_007674149.1 NC_020848_p54 hypothetical protein phrog_1035 endonuclease VII DNA, RNA and nucleotide metabolism -1 45565 45981
YP_007674104.1 NC_020848_p9 ATPase phrog_1297 ATPase other 1 3559 4575
YP_007674144.1 NC_020848_p49 hypothetical protein phrog_2050 virion structural protein head and packaging -1 41148 41945
YP_007674152.1 NC_020848_p57 hypothetical protein phrog_894 endolysin lysis 1 49000 49377
YP_007674177.1 NC_020848_p82 hypothetical protein phrog_19759 unknown function unknown function 1 64979 65242
YP_007674124.1 NC_020848_p29 hypothetical protein phrog_30140 unknown function unknown function 1 15834 15995
YP_007674105.1 NC_020848_p10 HNH endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism 1 4575 5057
YP_007674139.1 NC_020848_p44 hypothetical protein phrog_144 HNH endonuclease DNA, RNA and nucleotide metabolism 1 27422 27784
YP_007674158.1 NC_020848_p63 hypothetical protein phrog_2125 virion structural protein head and packaging -1 56663 57370
YP_007674203.1 NC_020848_p108 hypothetical protein phrog_22108 unknown function unknown function 1 73028 73309
YP_007674112.1 NC_020848_p17 hypothetical protein phrog_32924 unknown function unknown function -1 7720 8700
YP_007674162.1 NC_020848_p67 hypothetical protein phrog_2109 unknown function unknown function -1 59709 60410
YP_007674133.1 NC_020848_p38 hypothetical protein phrog_2135 DNA primase DNA, RNA and nucleotide metabolism 1 22476 24626
YP_007674109.1 NC_020848_p14 hypothetical protein phrog_22159 unknown function unknown function 1 6732 6899
YP_007674192.1 NC_020848_p97 hypothetical protein phrog_24006 unknown function unknown function 1 68944 69153
YP_007674114.1 NC_020848_p19 hypothetical protein phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 9081 9578
YP_007674186.1 NC_020848_p91 hypothetical protein phrog_32355 unknown function unknown function 1 67191 67433
YP_007674101.1 NC_020848_p6 hypothetical protein phrog_22043 unknown function unknown function 1 1935 2261
YP_007674189.1 NC_020848_p94 hypothetical protein phrog_21486 unknown function unknown function 1 68119 68376
YP_007674185.1 NC_020848_p90 hypothetical protein phrog_34664 unknown function unknown function 1 66967 67194
YP_007674143.1 NC_020848_p48 hypothetical protein phrog_2220 unknown function unknown function -1 39075 41099
YP_007674180.1 NC_020848_p85 hypothetical protein phrog_37233 unknown function unknown function 1 65814 65966
YP_007674097.1 NC_020848_p2 hypothetical protein phrog_3878 unknown function unknown function 1 303 746
YP_007674201.1 NC_020848_p106 hypothetical protein phrog_28266 unknown function unknown function 1 72555 72797
YP_007674132.1 NC_020848_p37 hypothetical protein phrog_19493 unknown function unknown function 1 21645 22463
YP_007674167.1 NC_020848_p72 hypothetical protein phrog_37304 unknown function unknown function 1 62563 62769
YP_007674166.1 NC_020848_p71 hypothetical protein phrog_19839 unknown function unknown function 1 62208 62453
YP_007674125.1 NC_020848_p30 hypothetical protein phrog_715 MazG-like pyrophosphatase other 1 15988 16416
YP_007674172.1 NC_020848_p77 hypothetical protein phrog_31927 unknown function unknown function 1 63708 63887
YP_007674126.1 NC_020848_p31 hypothetical protein phrog_14305 unknown function unknown function 1 16409 16567
YP_007674181.1 NC_020848_p86 hypothetical protein phrog_31920 unknown function unknown function 1 65969 66250
YP_007674113.1 NC_020848_p18 hypothetical protein phrog_21021 unknown function unknown function 1 8739 9035
YP_007674155.1 NC_020848_p60 hypothetical protein phrog_25191 unknown function unknown function -1 49993 52560
YP_007674138.1 NC_020848_p43 hypothetical protein phrog_20916 unknown function unknown function 1 26961 27332
YP_007674127.1 NC_020848_p32 ribonucleoside-diphosphate reductase alpha subunit phrog_84 ribonucleoside-diphosphate reductase large subunit DNA, RNA and nucleotide metabolism 1 16621 18714
YP_007674135.1 NC_020848_p40 hypothetical protein phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 24935 25663
YP_007674159.1 NC_020848_p64 hypothetical protein phrog_38 terminase large subunit head and packaging -1 57414 59024
YP_007674194.1 NC_020848_p99 hypothetical protein phrog_37164 unknown function unknown function 1 69490 69876
YP_007674099.1 NC_020848_p4 hypothetical protein phrog_24612 unknown function unknown function 1 1119 1475
YP_007674183.1 NC_020848_p88 hypothetical protein phrog_34265 unknown function unknown function 1 66472 66669
YP_007674146.1 NC_020848_p51 major coat protein phrog_1357 major head protein head and packaging -1 42582 44030
YP_007674140.1 NC_020848_p45 hypothetical protein phrog_2206 virion RNA polymerase DNA, RNA and nucleotide metabolism -1 27798 37460
YP_007674129.1 NC_020848_p34 ribonucleoside diphosphate reductase subunit beta phrog_86 ribonucleoside diphosphate reductase small subunit DNA, RNA and nucleotide metabolism 1 19002 20072
YP_007674096.1 NC_020848_p1 hypothetical protein phrog_21573 unknown function unknown function 1 86 313
YP_007674205.1 NC_020848_p110 hypothetical protein phrog_2081 HNH endonuclease DNA, RNA and nucleotide metabolism 1 74595 75071
YP_007674115.1 NC_020848_p20 hypothetical protein phrog_1314 HNH endonuclease DNA, RNA and nucleotide metabolism 1 9604 10767
YP_007674173.1 NC_020848_p78 hypothetical protein phrog_32436 unknown function unknown function 1 63896 64105
YP_007674098.1 NC_020848_p3 hypothetical protein phrog_22405 unknown function unknown function 1 746 1135
YP_007674188.1 NC_020848_p93 hypothetical protein phrog_38510 unknown function unknown function 1 67680 67970
YP_007674182.1 NC_020848_p87 hypothetical protein phrog_35828 unknown function unknown function 1 66250 66468
YP_007674208.1 NC_020848_p113 hypothetical protein phrog_24769 unknown function unknown function 1 75896 76300
YP_007674150.1 NC_020848_p55 hypothetical protein phrog_1216 portal protein head and packaging -1 46069 48183
YP_007674130.1 NC_020848_p35 hypothetical protein phrog_24997 unknown function unknown function 1 20090 20650
YP_007674184.1 NC_020848_p89 hypothetical protein phrog_24521 unknown function unknown function 1 66671 66967
YP_007674122.1 NC_020848_p27 hypothetical protein phrog_23902 unknown function unknown function 1 14882 15211
YP_007674111.1 NC_020848_p16 hypothetical protein phrog_27189 unknown function unknown function 1 7374 7610
YP_007674164.1 NC_020848_p69 hypothetical protein phrog_18963 unknown function unknown function 1 61096 61470
YP_007674110.1 NC_020848_p15 hypothetical protein phrog_29410 unknown function unknown function 1 6896 7372
YP_007674198.1 NC_020848_p103 hypothetical protein phrog_38112 unknown function unknown function 1 71885 72100
YP_007674163.1 NC_020848_p68 hypothetical protein phrog_1827 ATP-dependent protease other 1 60494 61048
YP_007674120.1 NC_020848_p25 hypothetical protein phrog_25446 unknown function unknown function 1 14274 14609
YP_007674193.1 NC_020848_p98 hypothetical protein phrog_32938 unknown function unknown function 1 69309 69500
YP_007674170.1 NC_020848_p75 hypothetical protein phrog_23892 unknown function unknown function 1 63335 63493
YP_007674204.1 NC_020848_p109 hypothetical protein phrog_2051 RNA polymerase DNA, RNA and nucleotide metabolism 1 73375 74586
YP_007674197.1 NC_020848_p102 hypothetical protein phrog_20611 unknown function unknown function 1 71673 71888
YP_007674169.1 NC_020848_p74 hypothetical protein phrog_28050 unknown function unknown function 1 63061 63333
YP_007674100.1 NC_020848_p5 hypothetical protein phrog_28857 unknown function unknown function 1 1532 1741
YP_007674131.1 NC_020848_p36 hypothetical protein phrog_2139 exonuclease DNA, RNA and nucleotide metabolism 1 20659 21645
YP_007674142.1 NC_020848_p47 hypothetical protein phrog_18869 unknown function unknown function -1 38377 39063
YP_007674103.1 NC_020848_p8 hypothetical protein phrog_21445 unknown function unknown function 1 3303 3533
YP_007674191.1 NC_020848_p96 hypothetical protein phrog_28835 unknown function unknown function 1 68715 68969
YP_007674179.1 NC_020848_p84 hypothetical protein phrog_35835 unknown function unknown function 1 65557 65811
YP_007674200.1 NC_020848_p105 hypothetical protein phrog_32854 unknown function unknown function 1 72311 72574
YP_007674176.1 NC_020848_p81 hypothetical protein phrog_35487 unknown function unknown function 1 64692 64979
YP_007674161.1 NC_020848_p66 hypothetical protein phrog_30842 unknown function unknown function -1 59405 59728
YP_007674202.1 NC_020848_p107 hypothetical protein phrog_23110 unknown function unknown function 1 72790 73041
YP_007674123.1 NC_020848_p28 thymidylate synthase phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism 1 15221 15862
YP_007674157.1 NC_020848_p62 hypothetical protein phrog_35823 unknown function unknown function -1 53235 56672
YP_007674151.1 NC_020848_p56 PhoH family protein phrog_170 PhoH-like phosphate starvation-inducible other 1 48279 49013
YP_007674136.1 NC_020848_p41 hypothetical protein phrog_743 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 25728 26459
YP_007674207.1 NC_020848_p112 hypothetical protein phrog_33616 unknown function unknown function 1 75460 75753
YP_007674108.1 NC_020848_p13 hypothetical protein phrog_11908 unknown function unknown function 1 5431 6732
YP_007674134.1 NC_020848_p39 hypothetical protein phrog_54 DksA-like zinc-finger protein other 1 24645 24926
YP_007674199.1 NC_020848_p104 hypothetical protein phrog_37931 unknown function unknown function 1 72097 72318
YP_007674210.1 NC_020848_p115 hypothetical protein singleton unknown function unknown function 1 76495 76671
YP_007674178.1 NC_020848_p83 hypothetical protein phrog_31380 unknown function unknown function 1 65277 65552
YP_007674119.1 NC_020848_p24 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 11663 14287
YP_007674145.1 NC_020848_p50 hypothetical protein phrog_2130 unknown function unknown function -1 41950 42492
YP_007674171.1 NC_020848_p76 hypothetical protein phrog_31013 unknown function unknown function 1 63480 63698
YP_007674187.1 NC_020848_p92 hypothetical protein phrog_31641 unknown function unknown function 1 67430 67702
YP_007674168.1 NC_020848_p73 hypothetical protein phrog_31278 unknown function unknown function 1 62772 63059
YP_007674154.1 NC_020848_p59 hypothetical protein phrog_402 unknown function unknown function -1 49704 49889