Genomic map of Loktanella phage pCB2051-A (NC_020853)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_020853
Definition
Loktanella phage pCB2051-A genomic sequence.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
56958
Host Name
Loktanella sp. CB 2051
Host domain
Bacteria
Is prophage?
undef
Number of proteins
76
%GC
54.97
Number of singletons
36
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_007674941.1 NC_020853_p44 hypothetical protein singleton unknown function unknown function 1 38978 39337
YP_007674934.1 NC_020853_p37 hypothetical protein phrog_1101 tail protein tail 1 33237 35708
YP_007674915.1 NC_020853_p18 hypothetical protein phrog_62 DNA helicase DNA, RNA and nucleotide metabolism 1 12453 13904
YP_007674959.1 NC_020853_p62 hypothetical protein singleton unknown function unknown function -1 47199 48008
YP_007674955.1 NC_020853_p58 hypothetical protein phrog_4786 cysteine dioxygenase other -1 45256 45879
YP_007674944.1 NC_020853_p47 hypothetical protein singleton unknown function unknown function 1 39891 40469
YP_007674905.1 NC_020853_p8 hypothetical protein singleton unknown function unknown function -1 2815 2967
YP_007674958.1 NC_020853_p61 hypothetical protein phrog_255 exonuclease DNA, RNA and nucleotide metabolism -1 46573 47202
YP_007674914.1 NC_020853_p17 hypothetical protein phrog_93 endonuclease DNA, RNA and nucleotide metabolism 1 12139 12426
YP_007674920.1 NC_020853_p23 portal protein phrog_21 portal protein head and packaging 1 17106 18797
YP_007674971.1 NC_020853_p74 hypothetical protein singleton unknown function unknown function -1 54518 55177
YP_007674932.1 NC_020853_p35 hypothetical protein phrog_1180 tail assembly chaperone tail 1 32780 33025
YP_007674969.1 NC_020853_p72 hypothetical protein singleton unknown function unknown function -1 53796 54293
YP_007674917.1 NC_020853_p20 hypothetical protein phrog_141 terminase small subunit head and packaging 1 14128 14709
YP_007674938.1 NC_020853_p41 hypothetical protein singleton unknown function unknown function 1 37532 37756
YP_007674948.1 NC_020853_p51 hypothetical protein singleton unknown function unknown function -1 41648 41905
YP_007674909.1 NC_020853_p12 hypothetical protein singleton unknown function unknown function 1 7061 7477
YP_007674922.1 NC_020853_p25 hypothetical protein phrog_49 head decoration head and packaging 1 20237 20647
YP_007674927.1 NC_020853_p30 hypothetical protein phrog_807 major tail protein with Ig-like domain tail 1 23812 24588
YP_007674945.1 NC_020853_p48 hypothetical protein singleton unknown function unknown function -1 40460 40681
YP_007674970.1 NC_020853_p73 hypothetical protein singleton unknown function unknown function -1 54280 54525
YP_007674954.1 NC_020853_p57 thymidylate synthase phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism -1 44206 45144
YP_007674968.1 NC_020853_p71 hypothetical protein singleton unknown function unknown function -1 53542 53799
YP_007674937.1 NC_020853_p40 hypothetical protein phrog_6368 unknown function unknown function 1 36564 37535
YP_007674906.1 NC_020853_p9 hypothetical protein singleton unknown function unknown function -1 3034 3741
YP_007674923.1 NC_020853_p26 hypothetical protein phrog_29 major head protein head and packaging 1 20692 21786
YP_007674908.1 NC_020853_p11 hypothetical protein singleton unknown function unknown function -1 6635 6922
YP_007674940.1 NC_020853_p43 hypothetical protein phrog_1224 endolysin head and packaging 1 38100 38996
YP_007674902.1 NC_020853_p5 hypothetical protein singleton unknown function unknown function -1 2173 2457
YP_007674921.1 NC_020853_p24 peptidase phrog_53 head maturation protease head and packaging 1 18834 20165
YP_007674943.1 NC_020853_p46 hypothetical protein singleton unknown function unknown function 1 39539 39904
YP_007674910.1 NC_020853_p13 hypothetical protein phrog_1048 unknown function unknown function 1 7547 7882
YP_007674939.1 NC_020853_p42 hypothetical protein singleton unknown function unknown function 1 37771 38103
YP_007674900.1 NC_020853_p3 hypothetical protein singleton unknown function unknown function -1 1701 1922
YP_007674942.1 NC_020853_p45 hypothetical protein singleton unknown function unknown function 1 39252 39542
YP_007674960.1 NC_020853_p63 hypothetical protein phrog_18599 unknown function unknown function -1 47995 48450
YP_007674935.1 NC_020853_p38 hypothetical protein singleton unknown function unknown function 1 35701 35868
YP_007674967.1 NC_020853_p70 hypothetical protein singleton unknown function unknown function -1 53321 53542
YP_007674931.1 NC_020853_p34 hypothetical protein phrog_778 tail assembly protein tail 1 31910 32770
YP_007674903.1 NC_020853_p6 hypothetical protein singleton unknown function unknown function -1 2454 2645
YP_007674963.1 NC_020853_p66 hypothetical protein singleton unknown function unknown function -1 49166 50032
YP_007674964.1 NC_020853_p67 ribonucleoside-diphosphate reductase phrog_84 ribonucleoside-diphosphate reductase large subunit DNA, RNA and nucleotide metabolism -1 50134 52419
YP_007674949.1 NC_020853_p52 hypothetical protein singleton unknown function unknown function -1 41895 42194
YP_007674973.1 NC_020853_p76 hypothetical protein singleton unknown function unknown function 1 56296 56508
YP_007674907.1 NC_020853_p10 hypothetical protein phrog_3022 DNA primase DNA, RNA and nucleotide metabolism -1 4253 6610
YP_007674912.1 NC_020853_p15 hypothetical protein phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 9128 10156
YP_007674965.1 NC_020853_p68 hypothetical protein singleton unknown function unknown function -1 52505 52756
YP_007674911.1 NC_020853_p14 hypothetical protein phrog_69 exonuclease DNA, RNA and nucleotide metabolism 1 7944 9107
YP_007674916.1 NC_020853_p19 hypothetical protein phrog_66 excisionase and transcriptional regulator integration and excision 1 13941 14135
YP_007674966.1 NC_020853_p69 hypothetical protein phrog_33873 unknown function unknown function -1 52756 53319
YP_007674930.1 NC_020853_p33 hypothetical protein phrog_1082 tail assembly protein tail 1 30177 31919
YP_007674898.1 NC_020853_p1 hypothetical protein singleton unknown function unknown function -1 178 423
YP_007674957.1 NC_020853_p60 hypothetical protein singleton unknown function unknown function -1 46353 46562
YP_007674928.1 NC_020853_p31 hypothetical protein phrog_5260 tail protein tail 1 24626 25078
YP_007674918.1 NC_020853_p21 terminase large subunit phrog_15 terminase large subunit head and packaging 1 14709 16796
YP_007674972.1 NC_020853_p75 DNA ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism -1 55189 56136
YP_007674901.1 NC_020853_p4 hypothetical protein singleton unknown function unknown function -1 1922 2173
YP_007674946.1 NC_020853_p49 hypothetical protein singleton unknown function unknown function -1 40681 40893
YP_007674929.1 NC_020853_p32 tail length tape measure protein phrog_2335 tail length tape measure protein tail 1 25338 30173
YP_007674947.1 NC_020853_p50 DNA methylase phrog_67 DNA methyltransferase other -1 40893 41669
YP_007674924.1 NC_020853_p27 hypothetical protein singleton unknown function unknown function 1 21862 22227
YP_007674936.1 NC_020853_p39 hypothetical protein phrog_7049 tail fiber protein tail 1 35887 36567
YP_007674950.1 NC_020853_p53 hypothetical protein phrog_13898 unknown function unknown function -1 42200 43060
YP_007674919.1 NC_020853_p22 hypothetical protein phrog_75 head-tail adaptor Ad1 connector 1 16864 17106
YP_007674925.1 NC_020853_p28 hypothetical protein phrog_4858 unknown function unknown function 1 22224 22607
YP_007674962.1 NC_020853_p65 hypothetical protein phrog_27185 unknown function unknown function -1 48899 49153
YP_007674904.1 NC_020853_p7 hypothetical protein singleton unknown function unknown function -1 2642 2818
YP_007674933.1 NC_020853_p36 hypothetical protein phrog_1196 tail assembly chaperone tail 1 33022 33237
YP_007674899.1 NC_020853_p2 hypothetical protein singleton unknown function unknown function -1 538 1704
YP_007674926.1 NC_020853_p29 hypothetical protein phrog_5078 tail terminator connector 1 23202 23753
YP_007674953.1 NC_020853_p56 hypothetical protein phrog_4212 unknown function unknown function -1 43875 44204
YP_007674952.1 NC_020853_p55 hypothetical protein singleton unknown function unknown function -1 43306 43875
YP_007674913.1 NC_020853_p16 DNA polymerase phrog_1252 DNA polymerase DNA, RNA and nucleotide metabolism 1 10203 12146
YP_007674956.1 NC_020853_p59 deoxycytidylate deaminase phrog_174 dCMP deaminase DNA, RNA and nucleotide metabolism -1 45876 46298
YP_007674961.1 NC_020853_p64 hypothetical protein singleton unknown function unknown function -1 48447 48902
YP_007674951.1 NC_020853_p54 hypothetical protein singleton unknown function unknown function -1 43053 43313