Genomic map of Cyanophage KBS-S-2A (NC_020854)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_020854
Definition
Cyanophage KBS-S-2A genomic sequence.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
40658
Host Name
Synechococcus sp.
Host domain
Bacteria
Is prophage?
undef
Number of proteins
64
%GC
49.06
Number of singletons
23
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_007674994.1 NC_020854_p21 hypothetical protein singleton unknown function unknown function -1 13090 13284
YP_007675027.1 NC_020854_p54 hypothetical protein phrog_161 head closure Hc1 connector 1 31661 32017
YP_007675003.1 NC_020854_p30 hypothetical protein singleton unknown function unknown function 1 17362 17574
YP_007675016.1 NC_020854_p43 hypothetical protein phrog_206 head scaffolding protein head and packaging 1 24228 24905
YP_007675014.1 NC_020854_p41 hypothetical protein singleton unknown function unknown function 1 23705 23929
YP_007675006.1 NC_020854_p33 hypothetical protein singleton unknown function unknown function 1 18112 18297
YP_007674995.1 NC_020854_p22 hypothetical protein phrog_22131 unknown function unknown function -1 13281 13445
YP_007675032.1 NC_020854_p59 hypothetical protein singleton unknown function unknown function 1 34305 37121
YP_007675004.1 NC_020854_p31 hypothetical protein singleton unknown function unknown function 1 17550 17789
YP_007674986.1 NC_020854_p13 hypothetical protein phrog_284 exonuclease DNA, RNA and nucleotide metabolism -1 9060 10211
YP_007675023.1 NC_020854_p50 hypothetical protein phrog_17104 unknown function unknown function 1 28450 29214
YP_007675022.1 NC_020854_p49 hypothetical protein phrog_30349 unknown function unknown function 1 28169 28453
YP_007675009.1 NC_020854_p36 hypothetical protein singleton unknown function unknown function 1 20196 20453
YP_007674983.1 NC_020854_p10 hypothetical protein singleton unknown function unknown function 1 7601 7813
YP_007674998.1 NC_020854_p25 hypothetical protein phrog_464 unknown function unknown function -1 14753 15598
YP_007674981.1 NC_020854_p8 hypothetical protein phrog_181 endolysin lysis 1 6623 7354
YP_007674999.1 NC_020854_p26 hypothetical protein phrog_140 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 15595 16014
YP_007675005.1 NC_020854_p32 hypothetical protein singleton unknown function unknown function 1 17786 17971
YP_007675011.1 NC_020854_p38 hypothetical protein singleton unknown function unknown function 1 21918 22235
YP_007675019.1 NC_020854_p46 hypothetical protein phrog_477 head-tail adaptor Ad1 connector 1 26506 27066
YP_007674997.1 NC_020854_p24 hypothetical protein singleton unknown function unknown function -1 14050 14763
YP_007674980.1 NC_020854_p7 hypothetical protein phrog_22542 unknown function unknown function 1 6269 6418
YP_007675034.1 NC_020854_p61 phage minor tail protein phrog_18 minor tail protein tail 1 37639 38346
YP_007675021.1 NC_020854_p48 hypothetical protein singleton unknown function unknown function 1 27321 28163
YP_007674987.1 NC_020854_p14 hypothetical protein singleton unknown function unknown function -1 10376 10615
YP_007675010.1 NC_020854_p37 hypothetical protein phrog_145 portal protein head and packaging 1 20524 21921
YP_007675017.1 NC_020854_p44 phage coat protein phrog_247 major head protein head and packaging 1 24989 26017
YP_007674982.1 NC_020854_p9 hypothetical protein phrog_36325 unknown function unknown function -1 7404 7565
YP_007674975.1 NC_020854_p2 hypothetical protein phrog_523 tail collar fiber protein tail 1 3324 4535
YP_007674977.1 NC_020854_p4 hypothetical protein singleton unknown function unknown function 1 5411 5575
YP_007675008.1 NC_020854_p35 phage terminase phrog_2 terminase large subunit head and packaging 1 18843 20084
YP_007675020.1 NC_020854_p47 hypothetical protein singleton unknown function unknown function 1 27069 27317
YP_007674996.1 NC_020854_p23 hypothetical protein singleton unknown function unknown function -1 13442 13714
YP_007675002.1 NC_020854_p29 hypothetical protein singleton unknown function unknown function 1 17193 17357
YP_007675024.1 NC_020854_p51 hypothetical protein phrog_17104 unknown function unknown function 1 29261 30088
YP_007675031.1 NC_020854_p58 hypothetical protein phrog_20784 unknown function unknown function 1 33751 34101
YP_007675036.1 NC_020854_p63 phage tail assembly protein phrog_32 tail assembly protein tail 1 39071 39703
YP_007674979.1 NC_020854_p6 hypothetical protein phrog_26178 unknown function unknown function 1 5996 6241
YP_007674984.1 NC_020854_p11 RNA polymerase sigma factor RpoD phrog_351 RNA polymerase sigma factor transcription regulation -1 7779 8708
YP_007674976.1 NC_020854_p3 hypothetical protein singleton unknown function unknown function 1 4572 5387
YP_007674990.1 NC_020854_p17 hypothetical protein phrog_66 excisionase and transcriptional regulator integration and excision -1 11105 11338
YP_007675012.1 NC_020854_p39 minor head protein phrog_241 head morphogenesis head and packaging 1 22232 23482
YP_007674991.1 NC_020854_p18 hypothetical protein phrog_21418 unknown function unknown function -1 11335 12000
YP_007675026.1 NC_020854_p53 hypothetical protein phrog_10356 virion structural protein head and packaging 1 30845 31606
YP_007675028.1 NC_020854_p55 hypothetical protein phrog_169 tail completion or Neck1 protein connector 1 32017 32460
YP_007674978.1 NC_020854_p5 hypothetical protein phrog_7802 unknown function unknown function 1 5663 5968
YP_007674992.1 NC_020854_p19 exonuclease phrog_412 exonuclease VIII DNA, RNA and nucleotide metabolism -1 12000 12785
YP_007675030.1 NC_020854_p57 hypothetical protein phrog_158 major tail protein tail 1 32907 33665
YP_007674974.1 NC_020854_p1 phage host specificity protein phrog_31 central tail fiber J tail 1 1 3324
YP_007675033.1 NC_020854_p60 hypothetical protein phrog_14 minor tail protein tail 1 37121 37642
YP_007675001.1 NC_020854_p28 hypothetical protein singleton unknown function unknown function 1 16348 17142
YP_007675037.1 NC_020854_p64 hypothetical protein phrog_1727 tail protein and host specificity tail 1 39703 40658
YP_007675018.1 NC_020854_p45 hypothetical protein phrog_18251 unknown function unknown function 1 26029 26394
YP_007674989.1 NC_020854_p16 hypothetical protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 10782 11111
YP_007675029.1 NC_020854_p56 hypothetical protein phrog_179 tail terminator connector 1 32457 32879
YP_007675013.1 NC_020854_p40 hypothetical protein phrog_2423 unknown function unknown function 1 23463 23615
YP_007674985.1 NC_020854_p12 hypothetical protein phrog_2214 HNH endonuclease DNA, RNA and nucleotide metabolism -1 8736 9059
YP_007675007.1 NC_020854_p34 hypothetical protein singleton unknown function unknown function 1 18239 18745
YP_007675025.1 NC_020854_p52 hypothetical protein phrog_1035 endonuclease VII DNA, RNA and nucleotide metabolism 1 30180 30848
YP_007674993.1 NC_020854_p20 hypothetical protein singleton unknown function unknown function -1 12782 12982
YP_007675000.1 NC_020854_p27 hypothetical protein singleton unknown function unknown function 1 16027 16272
YP_007675015.1 NC_020854_p42 hypothetical protein phrog_7595 unknown function unknown function 1 23926 24201
YP_007675035.1 NC_020854_p62 hypothetical protein phrog_30 minor tail protein tail 1 38349 39071
YP_007674988.1 NC_020854_p15 hypothetical protein singleton unknown function unknown function -1 10630 10779