| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_020856 |
Definition |
Sulfitobacter phage pCB2047-C, complete genome. |
Molecule type |
DNA |
Genome structure |
circular |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae. |
DB of origin |
REFSEQ |
Length |
40931 |
Host Name |
Sulfitobacter sp. CB2047 |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
73 |
%GC |
58.99 |
Number of singletons |
3 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_007675259.1 | NC_020856_p1 | major head protein | phrog_1328 | major head protein | head and packaging | 1 | 1 | 993 |
| YP_007675323.1 | NC_020856_p68 | GTPase Era | phrog_22377 | restriction endonuclease II | DNA, RNA and nucleotide metabolism | 1 | 35613 | 36077 |
| YP_007675302.1 | NC_020856_p47 | hypothetical protein | phrog_26707 | unknown function | unknown function | -1 | 26812 | 26997 |
| YP_007675307.1 | NC_020856_p52 | XRE-like HTH transcriptional regulator | phrog_8 | transcriptional regulator | transcription regulation | -1 | 28449 | 28772 |
| YP_007675291.1 | NC_020856_p36 | hypothetical protein | phrog_26113 | unknown function | unknown function | -1 | 22977 | 23333 |
| YP_007675321.1 | NC_020856_p66 | hypothetical protein | phrog_23136 | integrase | integration and excision | 1 | 34298 | 34465 |
| YP_007675284.2 | NC_020856_p29 | hypothetical protein | phrog_34106 | unknown function | unknown function | -1 | 20233 | 20346 |
| YP_007675310.1 | NC_020856_p55 | hypothetical protein | phrog_474 | phosphofructokinase | other | 1 | 29407 | 29673 |
| YP_007675288.1 | NC_020856_p33 | hypothetical protein | phrog_23314 | unknown function | unknown function | -1 | 22202 | 22543 |
| YP_007675293.1 | NC_020856_p38 | hypothetical protein | phrog_15346 | unknown function | unknown function | -1 | 23829 | 24326 |
| YP_007675271.1 | NC_020856_p13 | hypothetical protein | phrog_35501 | unknown function | unknown function | 1 | 11490 | 12116 |
| YP_007675279.1 | NC_020856_p24 | hypothetical protein | phrog_26860 | unknown function | unknown function | -1 | 18333 | 18680 |
| YP_007675311.1 | NC_020856_p56 | hypothetical protein | phrog_93 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 29673 | 29990 |
| YP_007675325.1 | NC_020856_p70 | terminase | phrog_2 | terminase large subunit | head and packaging | 1 | 36299 | 37633 |
| YP_007675322.1 | NC_020856_p67 | hypothetical protein | phrog_23142 | unknown function | unknown function | 1 | 34482 | 35102 |
| YP_007675275.1 | NC_020856_p18 | hypothetical protein | phrog_12264 | unknown function | unknown function | 1 | 15349 | 15705 |
| YP_007675281.1 | NC_020856_p26 | hypothetical protein | phrog_23768 | unknown function | unknown function | -1 | 19046 | 19309 |
| YP_007675300.1 | NC_020856_p45 | hypothetical protein | phrog_26241 | unknown function | unknown function | -1 | 26445 | 26642 |
| YP_007675292.1 | NC_020856_p37 | DUF1364 domain-containing protein | phrog_131 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 23506 | 23805 |
| YP_007675274.1 | NC_020856_p17 | molybdopterin binding protein | phrog_1356 | holin | lysis | 1 | 15152 | 15349 |
| YP_007675273.1 | NC_020856_p16 | lysozyme/endolysin/secretion activator protein | phrog_315 | endolysin | lysis | 1 | 14526 | 15155 |
| YP_007675309.1 | NC_020856_p54 | DNA binding protein | phrog_4973 | unknown function | unknown function | 1 | 29198 | 29410 |
| YP_007675268.1 | NC_020856_p10 | peptidoglycan hydrolase | phrog_26675 | endolysin | lysis | 1 | 6407 | 8338 |
| YP_007675301.1 | NC_020856_p46 | hypothetical protein | phrog_23705 | unknown function | unknown function | -1 | 26636 | 26821 |
| YP_009046888.1 | NC_020856_p21 | oxidoreductase | phrog_704 | DNA repair exonuclease | DNA, RNA and nucleotide metabolism | 1 | 16603 | 17754 |
| YP_007675267.1 | NC_020856_p9 | structural protein | phrog_6121 | virion structural protein | head and packaging | 1 | 5421 | 6410 |
| YP_007675289.1 | NC_020856_p34 | hypothetical protein | phrog_23572 | unknown function | unknown function | -1 | 22536 | 22700 |
| YP_007675299.1 | NC_020856_p44 | hypothetical protein | phrog_38655 | unknown function | unknown function | -1 | 26158 | 26448 |
| YP_007675308.1 | NC_020856_p53 | dehydrogenase | phrog_35 | transcriptional repressor | transcription regulation | 1 | 28848 | 29063 |
| YP_007675276.1 | NC_020856_p19 | hemolysin Xh1A-like protein | phrog_1193 | hemolysin | other | 1 | 15707 | 15916 |
| YP_007675286.2 | NC_020856_p31 | integrase | phrog_1 | integrase | integration and excision | -1 | 20643 | 21896 |
| YP_007675272.1 | NC_020856_p14 | hypothetical protein | phrog_23388 | unknown function | unknown function | 1 | 12137 | 14296 |
| YP_007675270.1 | NC_020856_p12 | tail fiber protein | phrog_24210 | tail fiber protein | tail | 1 | 10554 | 11465 |
| YP_007675269.1 | NC_020856_p11 | hypothetical protein | phrog_5880 | unknown function | unknown function | 1 | 8305 | 10317 |
| YP_007675324.1 | NC_020856_p69 | hypothetical protein | phrog_11043 | unknown function | unknown function | 1 | 36070 | 36348 |
| YP_007675319.1 | NC_020856_p64 | hypothetical protein | phrog_23823 | unknown function | unknown function | 1 | 33559 | 33969 |
| YP_007675261.1 | NC_020856_p3 | hypothetical protein | phrog_8441 | unknown function | unknown function | 1 | 1669 | 1827 |
| YP_007675260.1 | NC_020856_p2 | HNH endonuclease | phrog_99 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 1088 | 1693 |
| YP_007675262.1 | NC_020856_p4 | reprolysin/zinc metalloprotease | phrog_3982 | unknown function | unknown function | 1 | 1829 | 2155 |
| YP_007675303.1 | NC_020856_p48 | hypothetical protein | phrog_1273 | unknown function | unknown function | -1 | 26994 | 27386 |
| YP_007675318.1 | NC_020856_p63 | glutamate dehydrogenase | phrog_37515 | unknown function | unknown function | 1 | 33221 | 33562 |
| YP_007675305.1 | NC_020856_p50 | hypothetical protein | phrog_924 | unknown function | unknown function | -1 | 27715 | 28038 |
| YP_007675317.1 | NC_020856_p62 | hypothetical protein | phrog_7203 | unknown function | unknown function | 1 | 32437 | 33231 |
| YP_007675328.1 | NC_020856_p73 | hypothetical protein | phrog_3927 | head scaffolding protein | head and packaging | 1 | 39993 | 40931 |
| YP_007675326.1 | NC_020856_p71 | portal protein | phrog_1216 | portal protein | head and packaging | 1 | 37633 | 39732 |
| YP_007675306.1 | NC_020856_p51 | hypothetical protein | phrog_27755 | unknown function | unknown function | -1 | 27987 | 28184 |
| YP_007675266.1 | NC_020856_p8 | acetyltransferase | phrog_4470 | acyl-CoA N-acyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 4976 | 5434 |
| YP_007675263.1 | NC_020856_p5 | structural protein | phrog_2941 | virion structural protein | head and packaging | 1 | 2156 | 2785 |
| YP_007675265.1 | NC_020856_p7 | structural protein | phrog_5107 | amidase | lysis | 1 | 3384 | 4979 |
| YP_007675320.1 | NC_020856_p65 | hypothetical protein | phrog_2470 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 33966 | 34301 |
| YP_007675297.1 | NC_020856_p42 | hypothetical protein | phrog_31545 | unknown function | unknown function | -1 | 25749 | 25952 |
| YP_007675290.1 | NC_020856_p35 | hypothetical protein | phrog_24044 | unknown function | unknown function | -1 | 22693 | 22980 |
| YP_007675278.1 | NC_020856_p23 | hypothetical protein | phrog_26696 | unknown function | unknown function | -1 | 18163 | 18333 |
| YP_007675264.1 | NC_020856_p6 | hypothetical protein | phrog_6013 | tail protein | tail | 1 | 2782 | 3384 |
| YP_009046889.1 | NC_020856_p22 | hypothetical protein | phrog_31391 | unknown function | unknown function | 1 | 17766 | 17957 |
| YP_007675280.1 | NC_020856_p25 | hypothetical protein | phrog_23493 | unknown function | unknown function | -1 | 18677 | 19009 |
| YP_007675314.1 | NC_020856_p59 | hypothetical protein | singleton | unknown function | unknown function | 1 | 31130 | 31411 |
| YP_007675327.1 | NC_020856_p72 | hypothetical protein | phrog_12935 | unknown function | unknown function | 1 | 39729 | 39956 |
| YP_007675287.1 | NC_020856_p32 | hypothetical protein | phrog_66 | excisionase and transcriptional regulator | integration and excision | -1 | 22011 | 22205 |
| YP_007675277.1 | NC_020856_p20 | peptidase/serine protease | phrog_9683 | protease | other | 1 | 15935 | 16603 |
| YP_007675298.1 | NC_020856_p43 | peptidase | phrog_27641 | peptidase | other | -1 | 25949 | 26161 |
| YP_007675285.1 | NC_020856_p30 | hypothetical protein | phrog_24701 | unknown function | unknown function | -1 | 20315 | 20569 |
| YP_007675312.1 | NC_020856_p57 | DUF1376 domain-containing protein | phrog_9327 | primosomal protein | DNA, RNA and nucleotide metabolism | 1 | 29987 | 30772 |
| YP_007675283.2 | NC_020856_p28 | hypothetical protein | phrog_34457 | unknown function | unknown function | -1 | 19869 | 19979 |
| YP_007675313.1 | NC_020856_p58 | hypothetical protein | singleton | unknown function | unknown function | 1 | 30702 | 31133 |
| YP_007675304.1 | NC_020856_p49 | hypothetical protein | phrog_27505 | unknown function | unknown function | -1 | 27383 | 27778 |
| YP_007675316.1 | NC_020856_p61 | hypothetical protein | phrog_27820 | unknown function | unknown function | 1 | 32015 | 32440 |
| YP_009046887.1 | NC_020856_p15 | hypothetical protein | singleton | unknown function | unknown function | 1 | 14438 | 14533 |
| YP_007675315.1 | NC_020856_p60 | hypothetical protein | phrog_24591 | unknown function | unknown function | 1 | 31545 | 32018 |
| YP_007675282.1 | NC_020856_p27 | hypothetical protein | phrog_24023 | unknown function | unknown function | -1 | 19388 | 19783 |
| YP_007675294.1 | NC_020856_p39 | hypothetical protein | phrog_38699 | unknown function | unknown function | -1 | 24311 | 24592 |
| YP_007675295.1 | NC_020856_p40 | hypothetical protein | phrog_37570 | unknown function | unknown function | -1 | 24743 | 25093 |
| YP_007675296.1 | NC_020856_p41 | exodeoxyribonuclease | phrog_7838 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 25093 | 25752 |