| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_020862 |
Definition |
Sulfitobacter phage phiCB2047-B genomic sequence. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Baltimorevirus; unclassified Baltimorevirus. |
DB of origin |
REFSEQ |
Length |
74485 |
Host Name |
Sulfitobacter sp. CB2047 |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
75 |
%GC |
42.98 |
Number of singletons |
22 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_007675810.1 | NC_020862_p21 | hypothetical protein | phrog_14238 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | -1 | 28844 | 29794 |
| YP_007675807.1 | NC_020862_p18 | hypothetical protein | singleton | unknown function | unknown function | 1 | 17000 | 17872 |
| YP_007675823.1 | NC_020862_p38 | hypothetical protein | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | -1 | 49020 | 49337 |
| YP_007675837.1 | NC_020862_p52 | hypothetical protein | singleton | unknown function | unknown function | -1 | 58894 | 59052 |
| YP_008998707.1 | NC_020862_p25 | hypothetical protein | phrog_2139 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 33632 | 34627 |
| YP_007675800.1 | NC_020862_p11 | hypothetical protein | singleton | unknown function | unknown function | 1 | 7880 | 8311 |
| YP_007675817.1 | NC_020862_p32 | hypothetical protein | phrog_768 | DprA-like DNA recombination-mediator protein | DNA, RNA and nucleotide metabolism | -1 | 42394 | 42921 |
| YP_007675851.1 | NC_020862_p66 | hypothetical protein | singleton | unknown function | unknown function | -1 | 66070 | 66258 |
| YP_008998705.1 | NC_020862_p23 | hypothetical protein | phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 30697 | 31464 |
| YP_007675846.1 | NC_020862_p61 | hypothetical protein | singleton | unknown function | unknown function | -1 | 63345 | 63587 |
| YP_007675814.1 | NC_020862_p28 | DNA helicase | phrog_325 | Dda-like helicase | DNA, RNA and nucleotide metabolism | -1 | 37908 | 39185 |
| YP_007675796.1 | NC_020862_p7 | hypothetical protein | phrog_27978 | unknown function | unknown function | 1 | 4566 | 4889 |
| YP_007675842.1 | NC_020862_p57 | hypothetical protein | phrog_26997 | unknown function | unknown function | -1 | 62397 | 62693 |
| YP_007675811.1 | NC_020862_p22 | hypothetical protein | phrog_743 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 29772 | 30416 |
| YP_007675840.1 | NC_020862_p55 | hypothetical protein | phrog_12776 | unknown function | unknown function | -1 | 60860 | 61078 |
| YP_007675790.1 | NC_020862_p1 | hypothetical protein | phrog_2109 | unknown function | unknown function | 1 | 43 | 732 |
| YP_007675841.1 | NC_020862_p56 | hypothetical protein | phrog_2051 | RNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 61141 | 62337 |
| YP_007675858.1 | NC_020862_p73 | hypothetical protein | phrog_12736 | virion structural protein | head and packaging | -1 | 71488 | 73716 |
| YP_007675825.1 | NC_020862_p40 | hypothetical protein | phrog_29153 | unknown function | unknown function | -1 | 49920 | 50576 |
| YP_007675828.1 | NC_020862_p43 | hypothetical protein | phrog_4368 | unknown function | unknown function | -1 | 53126 | 53623 |
| YP_007675859.1 | NC_020862_p74 | hypothetical protein | phrog_13099 | virion structural protein | head and packaging | -1 | 73716 | 74018 |
| YP_007675826.1 | NC_020862_p41 | hypothetical protein | phrog_21510 | unknown function | unknown function | -1 | 50573 | 52597 |
| YP_007675854.1 | NC_020862_p69 | hypothetical protein | phrog_14155 | unknown function | unknown function | -1 | 66973 | 67230 |
| YP_007675856.1 | NC_020862_p71 | hypothetical protein | singleton | unknown function | unknown function | -1 | 68377 | 68589 |
| YP_007675852.1 | NC_020862_p67 | hypothetical protein | singleton | unknown function | unknown function | -1 | 66263 | 66643 |
| YP_007675802.1 | NC_020862_p13 | hypothetical protein | phrog_2130 | unknown function | unknown function | 1 | 10519 | 11337 |
| YP_007675839.1 | NC_020862_p54 | hypothetical protein | phrog_301 | secreted protein | other | -1 | 60322 | 60675 |
| YP_007675824.1 | NC_020862_p39 | hypothetical protein | phrog_671 | nucleotide pyrophosphohydrolase | other | -1 | 49318 | 49854 |
| YP_007675808.1 | NC_020862_p19 | virion RNA polymerase | phrog_2206 | virion RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 17945 | 27937 |
| YP_007675803.1 | NC_020862_p14 | hypothetical protein | phrog_2050 | virion structural protein | head and packaging | 1 | 11382 | 12728 |
| YP_007675827.1 | NC_020862_p42 | hypothetical protein | phrog_4368 | unknown function | unknown function | -1 | 52616 | 53122 |
| YP_007675832.1 | NC_020862_p47 | thymidylate synthase | phrog_85 | thymidylate synthase | DNA, RNA and nucleotide metabolism | -1 | 55082 | 56077 |
| YP_007675794.1 | NC_020862_p5 | hypothetical protein | phrog_37731 | unknown function | unknown function | 1 | 3321 | 3911 |
| YP_007675820.1 | NC_020862_p35 | hypothetical protein | phrog_36463 | unknown function | unknown function | -1 | 43888 | 44457 |
| YP_007675799.1 | NC_020862_p10 | hypothetical protein | phrog_2346 | unknown function | unknown function | 1 | 7413 | 7841 |
| YP_007675835.1 | NC_020862_p50 | dCTP deaminase | phrog_1663 | dCTP deaminase | DNA, RNA and nucleotide metabolism | -1 | 57085 | 57612 |
| YP_007675838.1 | NC_020862_p53 | ATPase | phrog_1297 | ATPase | other | -1 | 59072 | 60283 |
| YP_007675816.1 | NC_020862_p31 | hypothetical protein | singleton | unknown function | unknown function | -1 | 42062 | 42397 |
| YP_007675855.1 | NC_020862_p70 | hypothetical protein | singleton | unknown function | unknown function | -1 | 67531 | 67779 |
| YP_008998706.1 | NC_020862_p24 | hypothetical protein | phrog_2135 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 31480 | 33639 |
| YP_007675831.1 | NC_020862_p46 | hypothetical protein | phrog_5154 | unknown function | unknown function | -1 | 54471 | 55037 |
| YP_007675793.1 | NC_020862_p4 | hypothetical protein | phrog_13075 | unknown function | unknown function | 1 | 2990 | 3328 |
| YP_007675853.1 | NC_020862_p68 | hypothetical protein | singleton | unknown function | unknown function | -1 | 66640 | 66882 |
| YP_007675834.1 | NC_020862_p49 | hypothetical protein | singleton | unknown function | unknown function | -1 | 56471 | 56971 |
| YP_007675791.1 | NC_020862_p2 | hypothetical protein | phrog_38 | terminase large subunit | head and packaging | 1 | 725 | 2332 |
| YP_007675804.1 | NC_020862_p15 | hypothetical protein | phrog_2220 | unknown function | unknown function | 1 | 12740 | 15451 |
| YP_007675847.1 | NC_020862_p62 | hypothetical protein | singleton | unknown function | unknown function | -1 | 63589 | 63774 |
| YP_007675805.1 | NC_020862_p16 | hypothetical protein | phrog_2646 | unknown function | unknown function | 1 | 15462 | 15929 |
| YP_007675819.1 | NC_020862_p34 | hypothetical protein | singleton | unknown function | unknown function | -1 | 43328 | 43528 |
| YP_007675801.1 | NC_020862_p12 | major capsid coat protein | phrog_1357 | major head protein | head and packaging | 1 | 9216 | 10433 |
| YP_008998708.1 | NC_020862_p30 | ribonucleoside-diphosphate reductase | phrog_84 | ribonucleoside-diphosphate reductase large subunit | DNA, RNA and nucleotide metabolism | -1 | 39624 | 41999 |
| YP_007675821.1 | NC_020862_p36 | rIIB protector | phrog_2886 | RIIB lysis inhibitor | lysis | -1 | 44555 | 46177 |
| YP_007675845.1 | NC_020862_p60 | hypothetical protein | singleton | unknown function | unknown function | -1 | 63167 | 63355 |
| YP_007675795.1 | NC_020862_p6 | hypothetical protein | phrog_5867 | endolysin | lysis | 1 | 3908 | 4564 |
| YP_007675830.1 | NC_020862_p45 | hypothetical protein | singleton | unknown function | unknown function | -1 | 54090 | 54416 |
| YP_007675843.1 | NC_020862_p58 | hypothetical protein | phrog_9905 | unknown function | unknown function | -1 | 62690 | 63010 |
| YP_007675797.1 | NC_020862_p8 | hypothetical protein | singleton | unknown function | unknown function | 1 | 4855 | 5076 |
| YP_007675806.1 | NC_020862_p17 | hypothetical protein | phrog_938 | endolysin | lysis | 1 | 15942 | 17063 |
| YP_007675860.1 | NC_020862_p75 | hypothetical protein | singleton | unknown function | unknown function | 1 | 74091 | 74485 |
| YP_007675809.1 | NC_020862_p20 | hypothetical protein | singleton | unknown function | unknown function | -1 | 28266 | 28535 |
| YP_007675818.1 | NC_020862_p33 | hypothetical protein | phrog_2072 | unknown function | unknown function | -1 | 42943 | 43341 |
| YP_007675798.1 | NC_020862_p9 | hypothetical protein | phrog_1216 | portal protein | head and packaging | 1 | 5096 | 7384 |
| YP_007675833.1 | NC_020862_p48 | hypothetical protein | singleton | unknown function | unknown function | -1 | 56116 | 56397 |
| YP_007675813.1 | NC_020862_p27 | hypothetical protein | phrog_6035 | unknown function | unknown function | -1 | 37603 | 37911 |
| YP_007675812.1 | NC_020862_p26 | DNA polymerase I | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 34624 | 37242 |
| YP_007675792.1 | NC_020862_p3 | hypothetical protein | phrog_2125 | virion structural protein | head and packaging | 1 | 2301 | 2990 |
| YP_007675836.1 | NC_020862_p51 | hypothetical protein | phrog_1314 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 57675 | 58835 |
| YP_007675848.1 | NC_020862_p63 | hypothetical protein | phrog_2166 | N4-like RNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 63771 | 64571 |
| YP_007675857.1 | NC_020862_p72 | hypothetical protein | phrog_6368 | unknown function | unknown function | -1 | 70489 | 71457 |
| YP_007675815.1 | NC_020862_p29 | hypothetical protein | singleton | unknown function | unknown function | -1 | 39172 | 39540 |
| YP_007675850.1 | NC_020862_p65 | hypothetical protein | singleton | unknown function | unknown function | -1 | 65307 | 65708 |
| YP_007675844.1 | NC_020862_p59 | hypothetical protein | singleton | unknown function | unknown function | -1 | 63003 | 63167 |
| YP_007675822.1 | NC_020862_p37 | rIIA protein | phrog_2979 | RIIA lysis inhibitor | lysis | -1 | 46152 | 48815 |
| YP_007675829.1 | NC_020862_p44 | hypothetical protein | phrog_1627 | unknown function | unknown function | -1 | 53616 | 53951 |
| YP_007675849.1 | NC_020862_p64 | hypothetical protein | phrog_4099 | unknown function | unknown function | -1 | 64778 | 65209 |