| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_020868 |
Definition |
Vibrio phage VBP32 genomic sequence. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae. |
DB of origin |
REFSEQ |
Length |
76718 |
Host Name |
Vibrio parahaemolyticus |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
115 |
%GC |
42.48 |
Number of singletons |
0 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_007676537.1 | NC_020868_p47 | hypothetical protein | phrog_35487 | unknown function | unknown function | -1 | 18427 | 18714 |
| YP_007676529.1 | NC_020868_p39 | hypothetical protein | phrog_24521 | unknown function | unknown function | -1 | 16439 | 16735 |
| YP_007676579.1 | NC_020868_p89 | hypothetical protein | phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 57763 | 58491 |
| YP_007676575.1 | NC_020868_p85 | hypothetical protein | phrog_144 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 55642 | 56004 |
| YP_007676545.1 | NC_020868_p55 | hypothetical protein | phrog_31278 | unknown function | unknown function | -1 | 20347 | 20634 |
| YP_007676523.1 | NC_020868_p33 | hypothetical protein | phrog_25095 | unknown function | unknown function | -1 | 14695 | 14973 |
| YP_007676548.1 | NC_020868_p58 | hypothetical protein | phrog_25968 | unknown function | unknown function | -1 | 21431 | 21607 |
| YP_007676527.1 | NC_020868_p37 | hypothetical protein | phrog_32355 | unknown function | unknown function | -1 | 15973 | 16215 |
| YP_007676507.1 | NC_020868_p17 | hypothetical protein | phrog_30485 | unknown function | unknown function | -1 | 7939 | 8208 |
| YP_007676581.1 | NC_020868_p91 | hypothetical protein | phrog_2135 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 58800 | 60950 |
| YP_007676533.1 | NC_020868_p43 | hypothetical protein | phrog_37233 | unknown function | unknown function | -1 | 17440 | 17592 |
| YP_007676587.1 | NC_020868_p97 | ribonucleotide-diphosphate reductase alpha subunit | phrog_84 | ribonucleoside-diphosphate reductase large subunit | DNA, RNA and nucleotide metabolism | -1 | 64712 | 66805 |
| YP_007676570.1 | NC_020868_p80 | hypothetical protein | phrog_2050 | virion structural protein | head and packaging | 1 | 41481 | 42278 |
| YP_007676493.1 | NC_020868_p3 | hypothetical protein | phrog_26125 | unknown function | unknown function | -1 | 1780 | 1935 |
| YP_007676555.1 | NC_020868_p65 | hypothetical protein | phrog_38 | terminase large subunit | head and packaging | 1 | 24381 | 25991 |
| YP_007676562.1 | NC_020868_p72 | peptidase M15A | phrog_894 | endolysin | lysis | -1 | 34049 | 34426 |
| YP_007676530.1 | NC_020868_p40 | hypothetical protein | phrog_34265 | unknown function | unknown function | -1 | 16737 | 16934 |
| YP_007676534.1 | NC_020868_p44 | hypothetical protein | phrog_35835 | unknown function | unknown function | -1 | 17595 | 17849 |
| YP_007676531.1 | NC_020868_p41 | hypothetical protein | phrog_35828 | unknown function | unknown function | -1 | 16938 | 17156 |
| YP_007676602.1 | NC_020868_p112 | hypothetical protein | phrog_32924 | unknown function | unknown function | 1 | 74726 | 75706 |
| YP_007676598.1 | NC_020868_p108 | hypothetical protein | phrog_26431 | unknown function | unknown function | -1 | 72396 | 72647 |
| YP_007676574.1 | NC_020868_p84 | hypothetical protein | phrog_2206 | virion RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 45966 | 55628 |
| YP_007676496.1 | NC_020868_p6 | ATPase | phrog_1297 | ATPase | other | -1 | 2639 | 3655 |
| YP_007676553.1 | NC_020868_p63 | hypothetical protein | phrog_30842 | unknown function | unknown function | 1 | 23677 | 24000 |
| YP_007676596.1 | NC_020868_p106 | hypothetical protein | phrog_22623 | unknown function | unknown function | -1 | 71765 | 72100 |
| YP_007676535.1 | NC_020868_p45 | hypothetical protein | phrog_31380 | unknown function | unknown function | -1 | 17854 | 18129 |
| YP_007676569.1 | NC_020868_p79 | hypothetical protein | phrog_2130 | unknown function | unknown function | 1 | 40934 | 41476 |
| YP_007676605.1 | NC_020868_p115 | hypothetical protein | phrog_22159 | unknown function | unknown function | -1 | 76527 | 76694 |
| YP_007676564.1 | NC_020868_p74 | hypothetical protein | phrog_1216 | portal protein | head and packaging | 1 | 35243 | 37357 |
| YP_007676559.1 | NC_020868_p69 | hypothetical protein | phrog_25191 | unknown function | unknown function | 1 | 30866 | 33433 |
| YP_007676584.1 | NC_020868_p94 | hypothetical protein | phrog_24997 | unknown function | unknown function | -1 | 62776 | 63336 |
| YP_007676547.1 | NC_020868_p57 | hypothetical protein | phrog_19839 | unknown function | unknown function | -1 | 20953 | 21198 |
| YP_007676499.1 | NC_020868_p9 | hypothetical protein | phrog_22043 | unknown function | unknown function | -1 | 4953 | 5279 |
| YP_007676589.1 | NC_020868_p99 | hypothetical protein | phrog_715 | MazG-like pyrophosphatase | other | -1 | 67010 | 67438 |
| YP_007676543.1 | NC_020868_p53 | hypothetical protein | phrog_23892 | unknown function | unknown function | -1 | 19913 | 20071 |
| YP_007676524.1 | NC_020868_p34 | hypothetical protein | phrog_21486 | unknown function | unknown function | -1 | 15030 | 15287 |
| YP_007676577.1 | NC_020868_p87 | hypothetical protein | phrog_159 | RuvC-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | -1 | 56443 | 56967 |
| YP_007676497.1 | NC_020868_p7 | hypothetical protein | phrog_21445 | unknown function | unknown function | -1 | 3681 | 3911 |
| YP_007676590.1 | NC_020868_p100 | hypothetical protein | phrog_30140 | unknown function | unknown function | -1 | 67431 | 67592 |
| YP_007676568.1 | NC_020868_p78 | major coat protein | phrog_1357 | major head protein | head and packaging | 1 | 39396 | 40844 |
| YP_007676541.1 | NC_020868_p51 | hypothetical protein | phrog_31927 | unknown function | unknown function | -1 | 19519 | 19698 |
| YP_007676516.1 | NC_020868_p26 | hypothetical protein | phrog_20611 | unknown function | unknown function | -1 | 11518 | 11733 |
| YP_007676536.1 | NC_020868_p46 | hypothetical protein | phrog_19759 | unknown function | unknown function | -1 | 18164 | 18427 |
| YP_007676521.1 | NC_020868_p31 | hypothetical protein | phrog_24006 | unknown function | unknown function | -1 | 14253 | 14462 |
| YP_007676566.1 | NC_020868_p76 | hypothetical protein | phrog_2346 | unknown function | unknown function | 1 | 37893 | 38234 |
| YP_007676503.1 | NC_020868_p13 | hypothetical protein | phrog_3878 | unknown function | unknown function | -1 | 6468 | 6911 |
| YP_007676506.1 | NC_020868_p16 | hypothetical protein | phrog_33616 | unknown function | unknown function | -1 | 7653 | 7946 |
| YP_007676512.1 | NC_020868_p22 | hypothetical protein | phrog_28266 | unknown function | unknown function | -1 | 10609 | 10851 |
| YP_007676528.1 | NC_020868_p38 | hypothetical protein | phrog_34664 | unknown function | unknown function | -1 | 16212 | 16439 |
| YP_007676552.1 | NC_020868_p62 | hypothetical protein | phrog_2109 | unknown function | unknown function | 1 | 22995 | 23696 |
| YP_007676549.1 | NC_020868_p59 | hypothetical protein | phrog_22839 | unknown function | unknown function | 1 | 21733 | 21909 |
| YP_007676572.1 | NC_020868_p82 | hypothetical protein | phrog_18869 | unknown function | unknown function | 1 | 44363 | 45049 |
| YP_007676592.1 | NC_020868_p102 | hypothetical protein | phrog_23902 | unknown function | unknown function | -1 | 68215 | 68544 |
| YP_007676520.1 | NC_020868_p30 | hypothetical protein | phrog_32938 | unknown function | unknown function | -1 | 13906 | 14097 |
| YP_007676509.1 | NC_020868_p19 | hypothetical protein | phrog_2051 | RNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 8820 | 10031 |
| YP_007676594.1 | NC_020868_p104 | hypothetical protein | phrog_25446 | unknown function | unknown function | -1 | 68817 | 69152 |
| YP_007676492.1 | NC_020868_p2 | hypothetical protein | phrog_11908 | unknown function | unknown function | -1 | 482 | 1783 |
| YP_007676551.1 | NC_020868_p61 | hypothetical protein | phrog_1827 | ATP-dependent protease | other | -1 | 22357 | 22911 |
| YP_007676500.1 | NC_020868_p10 | hypothetical protein | phrog_28857 | unknown function | unknown function | -1 | 5473 | 5682 |
| YP_007676502.1 | NC_020868_p12 | hypothetical protein | phrog_22405 | unknown function | unknown function | -1 | 6079 | 6468 |
| YP_007676546.1 | NC_020868_p56 | hypothetical protein | phrog_37304 | unknown function | unknown function | -1 | 20637 | 20843 |
| YP_007676571.1 | NC_020868_p81 | hypothetical protein | phrog_2220 | unknown function | unknown function | 1 | 42327 | 44351 |
| YP_007676544.1 | NC_020868_p54 | hypothetical protein | phrog_28050 | unknown function | unknown function | -1 | 20073 | 20345 |
| YP_007676600.1 | NC_020868_p110 | hypothetical protein | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 73848 | 74345 |
| YP_007676557.1 | NC_020868_p67 | hypothetical protein | phrog_35823 | unknown function | unknown function | 1 | 26733 | 30191 |
| YP_007676601.1 | NC_020868_p111 | hypothetical protein | phrog_21021 | unknown function | unknown function | -1 | 74391 | 74687 |
| YP_007676538.1 | NC_020868_p48 | hypothetical protein | phrog_31527 | unknown function | unknown function | -1 | 18885 | 19052 |
| YP_007676494.1 | NC_020868_p4 | hypothetical protein | phrog_729 | cold shock protein | other | -1 | 1936 | 2148 |
| YP_007676585.1 | NC_020868_p95 | ribonucleotide-diphosphate reductase subunit beta | phrog_86 | ribonucleoside diphosphate reductase small subunit | DNA, RNA and nucleotide metabolism | -1 | 63354 | 64424 |
| YP_007676580.1 | NC_020868_p90 | hypothetical protein | phrog_54 | DksA-like zinc-finger protein | other | -1 | 58500 | 58781 |
| YP_007676498.1 | NC_020868_p8 | hypothetical protein | phrog_3118 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 3892 | 4251 |
| YP_007676603.1 | NC_020868_p113 | hypothetical protein | phrog_27189 | unknown function | unknown function | -1 | 75816 | 76052 |
| YP_007676588.1 | NC_020868_p98 | hypothetical protein | phrog_14305 | unknown function | unknown function | -1 | 66859 | 67017 |
| YP_007676583.1 | NC_020868_p93 | hypothetical protein | phrog_2139 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 61781 | 62767 |
| YP_007676495.1 | NC_020868_p5 | HNH endonuclease | phrog_99 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 2157 | 2639 |
| YP_007676599.1 | NC_020868_p109 | hypothetical protein | phrog_1314 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 72659 | 73822 |
| YP_007676511.1 | NC_020868_p21 | hypothetical protein | phrog_23110 | unknown function | unknown function | -1 | 10365 | 10616 |
| YP_007676561.1 | NC_020868_p71 | hypothetical protein | phrog_19043 | unknown function | unknown function | 1 | 33726 | 34025 |
| YP_007676519.1 | NC_020868_p29 | hypothetical protein | phrog_37164 | unknown function | unknown function | -1 | 13530 | 13916 |
| YP_007676526.1 | NC_020868_p36 | hypothetical protein | phrog_31641 | unknown function | unknown function | -1 | 15704 | 15976 |
| YP_007676582.1 | NC_020868_p92 | hypothetical protein | phrog_19493 | unknown function | unknown function | -1 | 60963 | 61781 |
| YP_007676560.1 | NC_020868_p70 | hypothetical protein | phrog_402 | unknown function | unknown function | 1 | 33537 | 33722 |
| YP_007676513.1 | NC_020868_p23 | hypothetical protein | phrog_32854 | unknown function | unknown function | -1 | 10832 | 11095 |
| YP_007676576.1 | NC_020868_p86 | hypothetical protein | phrog_20916 | unknown function | unknown function | -1 | 56094 | 56465 |
| YP_007676504.1 | NC_020868_p14 | hypothetical protein | phrog_21573 | unknown function | unknown function | -1 | 6901 | 7128 |
| YP_007676567.1 | NC_020868_p77 | hypothetical protein | phrog_2120 | tail length tape measure protein | tail | 1 | 38234 | 39379 |
| YP_007676510.1 | NC_020868_p20 | hypothetical protein | phrog_22108 | unknown function | unknown function | -1 | 10097 | 10378 |
| YP_007676505.1 | NC_020868_p15 | hypothetical protein | phrog_24769 | unknown function | unknown function | -1 | 7106 | 7510 |
| YP_007676518.1 | NC_020868_p28 | hypothetical protein | phrog_2166 | N4-like RNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 12480 | 13481 |
| YP_007676540.1 | NC_020868_p50 | hypothetical protein | phrog_32436 | unknown function | unknown function | -1 | 19301 | 19510 |
| YP_007676522.1 | NC_020868_p32 | hypothetical protein | phrog_28835 | unknown function | unknown function | -1 | 14437 | 14691 |
| YP_007676604.1 | NC_020868_p114 | hypothetical protein | phrog_29410 | unknown function | unknown function | -1 | 76054 | 76530 |
| YP_007676501.1 | NC_020868_p11 | hypothetical protein | phrog_24612 | unknown function | unknown function | -1 | 5739 | 6095 |
| YP_007676515.1 | NC_020868_p25 | hypothetical protein | phrog_38112 | unknown function | unknown function | -1 | 11306 | 11521 |
| YP_007676591.1 | NC_020868_p101 | thymidylate synthase | phrog_85 | thymidylate synthase | DNA, RNA and nucleotide metabolism | -1 | 67564 | 68205 |
| YP_007676491.1 | NC_020868_p1 | hypothetical protein | phrog_22159 | unknown function | unknown function | -1 | 315 | 482 |
| YP_007676532.1 | NC_020868_p42 | hypothetical protein | phrog_31920 | unknown function | unknown function | -1 | 17156 | 17437 |
| YP_007676556.1 | NC_020868_p66 | hypothetical protein | phrog_2125 | virion structural protein | head and packaging | 1 | 26035 | 26742 |
| YP_007676554.1 | NC_020868_p64 | hypothetical protein | phrog_33980 | unknown function | unknown function | 1 | 24100 | 24381 |
| YP_007676578.1 | NC_020868_p88 | hypothetical protein | phrog_743 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 56967 | 57698 |
| YP_007676558.1 | NC_020868_p68 | hypothetical protein | phrog_17691 | unknown function | unknown function | 1 | 30419 | 30862 |
| YP_007676517.1 | NC_020868_p27 | hypothetical protein | phrog_314 | homing endonuclease | DNA, RNA and nucleotide metabolism | -1 | 11717 | 12424 |
| YP_007676593.1 | NC_020868_p103 | hypothetical protein | phrog_236 | nucleotide kinase | other | -1 | 68549 | 68815 |
| YP_007676550.1 | NC_020868_p60 | hypothetical protein | phrog_18963 | unknown function | unknown function | -1 | 21935 | 22309 |
| YP_007676514.1 | NC_020868_p24 | hypothetical protein | phrog_37931 | unknown function | unknown function | -1 | 11088 | 11309 |
| YP_007676539.1 | NC_020868_p49 | hypothetical protein | phrog_37661 | unknown function | unknown function | -1 | 19045 | 19290 |
| YP_007676597.1 | NC_020868_p107 | hypothetical protein | phrog_20260 | unknown function | unknown function | -1 | 72118 | 72381 |
| YP_007676573.1 | NC_020868_p83 | hypothetical protein | phrog_20377 | unknown function | unknown function | 1 | 45052 | 45915 |
| YP_007676565.1 | NC_020868_p75 | hypothetical protein | phrog_1035 | endonuclease VII | DNA, RNA and nucleotide metabolism | 1 | 37445 | 37861 |
| YP_007676586.1 | NC_020868_p96 | hypothetical protein | phrog_35441 | unknown function | unknown function | -1 | 64424 | 64702 |
| YP_007676525.1 | NC_020868_p35 | hypothetical protein | phrog_38510 | unknown function | unknown function | -1 | 15436 | 15726 |
| YP_007676508.1 | NC_020868_p18 | hypothetical protein | phrog_2081 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 8335 | 8811 |
| YP_007676542.1 | NC_020868_p52 | hypothetical protein | phrog_31013 | unknown function | unknown function | -1 | 19708 | 19926 |
| YP_007676563.1 | NC_020868_p73 | PhoH family protein | phrog_170 | PhoH-like phosphate starvation-inducible | other | -1 | 34413 | 35147 |
| YP_007676595.1 | NC_020868_p105 | DNA polymerase I | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 69139 | 71763 |