Genomic map of Listeria phage vB_LmoM_AG20 (NC_020871)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_020871
Definition
Listeria phage vB_LmoM_AG20, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Herelleviridae; Jasinkavirinae; Pecentumvirus; Listeria virus AG20.
DB of origin
REFSEQ
Length
133057
Host Name
Listeria monocytogenes
Host domain
Bacteria
Is prophage?
undef
Number of proteins
178
%GC
35.93
Number of singletons
1
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_007676803.1 NC_020871_p135 holin phrog_263 holin lysis 1 107333 107698
YP_007676764.1 NC_020871_p96 hypothetical protein phrog_1394 virion structural protein head and packaging 1 68333 68854
YP_007676755.1 NC_020871_p87 hypothetical protein phrog_1316 RNA polymerase beta subunit DNA, RNA and nucleotide metabolism 1 52839 53432
YP_007676747.1 NC_020871_p79 hypothetical protein phrog_772 tail fiber protein tail 1 46488 47369
YP_007676683.1 NC_020871_p15 hypothetical protein phrog_6159 unknown function unknown function 1 7485 7670
YP_007676695.1 NC_020871_p27 hypothetical protein phrog_9517 unknown function unknown function -1 12002 12283
YP_007676817.1 NC_020871_p149 hypothetical protein phrog_249 porphyrin biosynthesis moron, auxiliary metabolic gene and host takeover 1 116363 117379
YP_007676684.1 NC_020871_p16 hypothetical protein phrog_3392 unknown function unknown function 1 7670 8017
YP_007676787.1 NC_020871_p119 hypothetical protein phrog_9820 unknown function unknown function 1 90830 91126
YP_007676680.1 NC_020871_p12 hypothetical protein phrog_7738 unknown function unknown function 1 6243 6668
YP_007676799.1 NC_020871_p131 hypothetical protein phrog_1867 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 103621 104883
YP_007676766.1 NC_020871_p98 hypothetical protein phrog_1074 unknown function unknown function 1 72372 72593
YP_007676785.1 NC_020871_p117 ribonucleoside-diphosphate reductase beta subunit phrog_86 ribonucleoside diphosphate reductase small subunit DNA, RNA and nucleotide metabolism 1 89347 90378
YP_007676727.1 NC_020871_p59 hypothetical protein phrog_1481 unknown function unknown function -1 32165 32509
YP_007676693.1 NC_020871_p25 hypothetical protein phrog_9952 unknown function unknown function -1 11265 11435
YP_007676825.1 NC_020871_p157 hypothetical protein phrog_1104 virion structural protein head and packaging 1 121853 122320
YP_007676708.1 NC_020871_p40 RNA ligase phrog_548 RNA ligase DNA, RNA and nucleotide metabolism -1 18651 19592
YP_007676679.1 NC_020871_p11 hypothetical protein phrog_11450 unknown function unknown function 1 4906 6090
YP_007676723.1 NC_020871_p55 hypothetical protein singleton unknown function unknown function -1 29352 29609
YP_007676686.1 NC_020871_p18 hypothetical protein phrog_9112 unknown function unknown function 1 8409 8741
YP_007676745.1 NC_020871_p77 major capsid protein precursor phrog_752 major head protein head and packaging 1 44643 46049
YP_007676702.1 NC_020871_p34 hypothetical protein phrog_12982 tail fiber protein tail -1 16208 16405
YP_007676801.1 NC_020871_p133 hypothetical protein phrog_1089 unknown function unknown function 1 106259 106636
YP_007676719.1 NC_020871_p51 hypothetical protein phrog_1257 ribosome associated inhibitor A; zinc finger domain moron, auxiliary metabolic gene and host takeover -1 25609 25821
YP_007676809.1 NC_020871_p141 hypothetical protein phrog_1080 unknown function unknown function 1 111583 112128
YP_007676792.1 NC_020871_p124 nicotinamide phosphoribosyl transferase phrog_448 nicotinamide phosphoribosyl transferase other 1 94115 95908
YP_007676757.1 NC_020871_p89 tail lysin phrog_1015 tail protein with lysin activity tail 1 57268 59655
YP_007676721.1 NC_020871_p53 hypothetical protein phrog_9386 unknown function unknown function -1 27211 27618
YP_007676758.1 NC_020871_p90 tail fiber phrog_7994 glycerophosphoryl diester phosphodiesterase other 1 59673 61205
YP_007676791.1 NC_020871_p123 ribose-phosphate diphosphokinase phrog_619 ribose-phosphate pyrophosphokinase other 1 93190 94104
YP_007676712.1 NC_020871_p44 hypothetical protein phrog_9717 unknown function unknown function -1 20836 21105
YP_007676731.1 NC_020871_p63 hypothetical protein phrog_1063 terminase small subunit head and packaging 1 33558 33974
YP_007676733.1 NC_020871_p65 terminase large subunit phrog_675 terminase large subunit head and packaging 1 34605 36158
YP_007676676.1 NC_020871_p8 hypothetical protein phrog_9360 unknown function unknown function 1 2912 3040
YP_007676754.1 NC_020871_p86 hypothetical protein phrog_1038 tail assembly chaperone tail 1 52328 52771
YP_007676674.1 NC_020871_p6 hypothetical protein phrog_9612 unknown function unknown function 1 2323 2595
YP_007676845.1 NC_020871_p177 hypothetical protein phrog_17618 unknown function unknown function 1 132344 132697
YP_007676816.1 NC_020871_p148 hypothetical protein phrog_9512 unknown function unknown function 1 115546 116358
YP_007676689.1 NC_020871_p21 hypothetical protein phrog_10101 unknown function unknown function 1 9404 9766
YP_007676740.1 NC_020871_p72 hypothetical protein phrog_9678 unknown function unknown function 1 40359 40679
YP_007676741.1 NC_020871_p73 hypothetical protein phrog_1108 portal protein head and packaging 1 40681 41031
YP_007676822.1 NC_020871_p154 hypothetical protein phrog_10568 unknown function unknown function 1 119920 120498
YP_007676714.1 NC_020871_p46 hypothetical protein phrog_9650 unknown function unknown function -1 22470 22673
YP_007676678.1 NC_020871_p10 hypothetical protein phrog_12804 unknown function unknown function 1 4390 4896
YP_007676673.1 NC_020871_p5 hypothetical protein phrog_9852 unknown function unknown function 1 1881 2168
YP_007676694.1 NC_020871_p26 hypothetical protein phrog_121 unknown function unknown function -1 11460 12005
YP_007676815.1 NC_020871_p147 hypothetical protein phrog_6360 unknown function unknown function 1 115107 115553
YP_007676779.1 NC_020871_p111 hypothetical protein phrog_7516 unknown function unknown function 1 85074 85397
YP_007676804.1 NC_020871_p136 hypothetical protein phrog_215 structural protein with Ig domain head and packaging 1 107716 108423
YP_007676697.1 NC_020871_p29 hypothetical protein phrog_9379 unknown function unknown function -1 12568 13110
YP_007676701.1 NC_020871_p33 hypothetical protein phrog_9902 unknown function unknown function -1 15573 16205
YP_007676810.1 NC_020871_p142 hypothetical protein phrog_15858 unknown function unknown function 1 112174 112380
YP_007676777.1 NC_020871_p109 deoxyuridine 5'-triphosphate nucleotidohydrolase phrog_135 dUTPase DNA, RNA and nucleotide metabolism 1 84209 84856
YP_007676698.1 NC_020871_p30 hypothetical protein phrog_9937 unknown function unknown function -1 13107 13334
YP_007676820.1 NC_020871_p152 hypothetical protein phrog_7350 unknown function unknown function 1 118734 119312
YP_007676724.1 NC_020871_p56 hypothetical protein phrog_9075 unknown function unknown function -1 29734 30159
YP_007676722.1 NC_020871_p54 hypothetical protein phrog_9389 unknown function unknown function -1 27644 27841
YP_007676734.1 NC_020871_p66 hypothetical protein phrog_1917 virion structural protein head and packaging 1 36227 37066
YP_007676836.1 NC_020871_p168 hypothetical protein phrog_10046 unknown function unknown function 1 128817 129080
YP_007676669.1 NC_020871_p1 hypothetical protein phrog_14554 unknown function unknown function 1 533 787
YP_007676833.1 NC_020871_p165 hypothetical protein phrog_10369 unknown function unknown function 1 127220 127369
YP_007676700.1 NC_020871_p32 hypothetical protein phrog_10136 unknown function unknown function -1 14592 15014
YP_007676769.1 NC_020871_p101 hypothetical protein phrog_134 unknown function unknown function 1 74327 74464
YP_007676716.1 NC_020871_p48 hypothetical protein phrog_14899 unknown function unknown function -1 23111 23335
YP_007676688.1 NC_020871_p20 hypothetical protein phrog_12642 unknown function unknown function -1 9156 9371
YP_007676677.1 NC_020871_p9 hypothetical protein phrog_98 unknown function unknown function 1 3343 3747
YP_007676805.1 NC_020871_p137 hypothetical protein phrog_9872 unknown function unknown function 1 108529 108915
YP_007676772.1 NC_020871_p104 helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 77983 79446
YP_007676821.1 NC_020871_p153 hypothetical protein phrog_10641 unknown function unknown function 1 119351 119923
YP_007676750.1 NC_020871_p82 hypothetical protein phrog_1000 unknown function unknown function 1 48835 49674
YP_007676705.1 NC_020871_p37 hypothetical protein phrog_9695 unknown function unknown function -1 17601 17819
YP_007676753.1 NC_020871_p85 hypothetical protein phrog_985 virion structural protein head and packaging 1 51754 52176
YP_007676819.1 NC_020871_p151 hypothetical protein phrog_7350 unknown function unknown function 1 118273 118728
YP_007676717.1 NC_020871_p49 regulatory protein phrog_3 transcriptional repressor transcription regulation -1 23349 23591
YP_007676839.1 NC_020871_p171 hypothetical protein phrog_28207 unknown function unknown function 1 129969 130064
YP_007676771.1 NC_020871_p103 hypothetical protein phrog_1098 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 76325 77965
YP_007676742.1 NC_020871_p74 hypothetical protein phrog_12 portal protein head and packaging 1 41048 42691
YP_007676675.1 NC_020871_p7 hypothetical protein phrog_1933 unknown function unknown function 1 2612 2809
YP_007676703.1 NC_020871_p35 hypothetical protein phrog_1934 unknown function unknown function -1 16395 16907
YP_007676773.1 NC_020871_p105 hypothetical protein phrog_100 SbcD-like subunit of palindrome specific endonuclease DNA, RNA and nucleotide metabolism 1 79461 80513
YP_007676704.1 NC_020871_p36 phosphoesterase phrog_547 phosphoesterase other -1 16987 17604
YP_007676797.1 NC_020871_p129 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 100845 103013
YP_007676760.1 NC_020871_p92 hypothetical protein phrog_1073 unknown function unknown function 1 61961 62494
YP_007676765.1 NC_020871_p97 hypothetical protein phrog_877 unknown function unknown function 1 68871 72326
YP_007676841.1 NC_020871_p173 hypothetical protein phrog_11464 unknown function unknown function 1 130681 130824
YP_007676768.1 NC_020871_p100 hypothetical protein phrog_9920 unknown function unknown function 1 73920 74330
YP_007676761.1 NC_020871_p93 baseplate protein phrog_975 baseplate protein tail 1 62481 63191
YP_007676793.1 NC_020871_p125 hypothetical protein phrog_9253 unknown function unknown function 1 96004 98463
YP_007676844.1 NC_020871_p176 hypothetical protein phrog_7822 unknown function unknown function 1 131768 132211
YP_007676800.1 NC_020871_p132 recombinase A phrog_97 UvsX-like recombinase other 1 104953 106197
YP_007676672.1 NC_020871_p4 hypothetical protein phrog_9527 unknown function unknown function 1 1593 1868
YP_007676794.1 NC_020871_p126 hypothetical protein phrog_1054 unknown function unknown function 1 98557 99345
YP_007676713.1 NC_020871_p45 hypothetical protein phrog_1075 tRNA splicing ligase DNA, RNA and nucleotide metabolism -1 21152 22459
YP_007676763.1 NC_020871_p95 hypothetical protein phrog_2386 virion structural protein head and packaging 1 64287 68216
YP_007676783.1 NC_020871_p115 ribonucleotide-diphosphate reductase alpha subunit phrog_3844 NrdA-like aerobic NDP reductase large subunit moron, auxiliary metabolic gene and host takeover 1 88110 89141
YP_007676830.1 NC_020871_p162 hypothetical protein phrog_10429 unknown function unknown function 1 125476 125766
YP_007676710.1 NC_020871_p42 hypothetical protein phrog_9898 unknown function unknown function -1 20139 20330
YP_007676699.1 NC_020871_p31 hypothetical protein phrog_10246 unknown function unknown function -1 13337 14590
YP_007676751.1 NC_020871_p83 hypothetical protein phrog_9471 unknown function unknown function 1 49674 49994
YP_007676826.1 NC_020871_p158 hypothetical protein phrog_9186 unknown function unknown function 1 122435 123520
YP_007676767.1 NC_020871_p99 hypothetical protein phrog_9794 unknown function unknown function 1 72596 73888
YP_007676718.1 NC_020871_p50 hypothetical protein phrog_850 RNA-binding protein DNA, RNA and nucleotide metabolism -1 23693 25213
YP_007676831.1 NC_020871_p163 hypothetical protein phrog_16836 unknown function unknown function -1 126167 126448
YP_007676687.1 NC_020871_p19 hypothetical protein phrog_11576 unknown function unknown function 1 8841 9137
YP_007676681.1 NC_020871_p13 hypothetical protein phrog_6964 unknown function unknown function 1 6686 6976
YP_007676784.1 NC_020871_p116 hypothetical protein phrog_30833 unknown function unknown function 1 89230 89346
YP_007676835.1 NC_020871_p167 hypothetical protein phrog_15935 unknown function unknown function 1 128454 128729
YP_007676782.1 NC_020871_p114 ribonucleotide-diphosphate reductase alpha subunit phrog_3987 ribonucleotide reductase large subunit DNA, RNA and nucleotide metabolism 1 86550 87899
YP_007676795.1 NC_020871_p127 DNA-binding protein phrog_379 DNA binding protein DNA, RNA and nucleotide metabolism 1 99338 99652
YP_007676828.1 NC_020871_p160 hypothetical protein phrog_9011 unknown function unknown function 1 124157 124690
YP_007676823.1 NC_020871_p155 hypothetical protein phrog_9358 unknown function unknown function 1 120491 120823
YP_007676739.1 NC_020871_p71 hypothetical protein phrog_6631 unknown function unknown function 1 39528 40256
YP_007676834.1 NC_020871_p166 hypothetical protein phrog_12014 unknown function unknown function 1 127480 128262
YP_007676796.1 NC_020871_p128 3'-5' exonuclease phrog_4008 DNA polymerase DNA, RNA and nucleotide metabolism 1 99734 100570
YP_007676692.1 NC_020871_p24 hypothetical protein phrog_9499 unknown function unknown function -1 10952 11272
YP_007676798.1 NC_020871_p130 hypothetical protein phrog_1069 unknown function unknown function 1 103108 103584
YP_007676744.1 NC_020871_p76 hypothetical protein phrog_1133 unknown function unknown function 1 43577 44473
YP_007676829.1 NC_020871_p161 hypothetical protein phrog_9671 unknown function unknown function 1 124705 125463
YP_007676685.1 NC_020871_p17 hypothetical protein phrog_9728 unknown function unknown function 1 8049 8330
YP_007676670.1 NC_020871_p2 hypothetical protein phrog_9566 unknown function unknown function 1 784 1044
YP_007676837.1 NC_020871_p169 hypothetical protein phrog_4655 unknown function unknown function 1 129164 129439
YP_007676775.1 NC_020871_p107 hypothetical protein phrog_1070 anti-sigma factor moron, auxiliary metabolic gene and host takeover 1 82511 83101
YP_007676814.1 NC_020871_p146 hypothetical protein phrog_9749 unknown function unknown function 1 114664 115101
YP_007676736.1 NC_020871_p68 hypothetical protein phrog_1116 unknown function unknown function 1 37258 37896
YP_007676730.1 NC_020871_p62 hypothetical protein phrog_1321 unknown function unknown function 1 33280 33552
YP_007676846.1 NC_020871_p178 hypothetical protein phrog_10501 unknown function unknown function 1 132718 132996
YP_007676818.1 NC_020871_p150 hypothetical protein phrog_7005 unknown function unknown function 1 117366 118211
YP_007676707.1 NC_020871_p39 hypothetical protein phrog_9618 unknown function unknown function -1 18216 18572
YP_007676691.1 NC_020871_p23 hypothetical protein phrog_246 NinI-like serine-threonine phosphatase other -1 10166 10939
YP_007676788.1 NC_020871_p120 thioredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 91150 91461
YP_007676748.1 NC_020871_p80 hypothetical protein phrog_1004 virion structural protein head and packaging 1 47387 48205
YP_007676756.1 NC_020871_p88 tail lysin phrog_1047 tail associated lysin tail 1 53494 57222
YP_007676776.1 NC_020871_p108 primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism 1 83101 84162
YP_007676726.1 NC_020871_p58 hypothetical protein phrog_937 hemolysin other -1 31799 32140
YP_007676774.1 NC_020871_p106 hypothetical protein phrog_77 SbcC-like subunit of palindrome specific endonuclease DNA, RNA and nucleotide metabolism 1 80608 82491
YP_007676715.1 NC_020871_p47 hypothetical protein phrog_990 metal-dependent phosphohydrolase other -1 22666 23097
YP_007676749.1 NC_020871_p81 hypothetical protein phrog_1127 unknown function unknown function 1 48205 48822
YP_007676770.1 NC_020871_p102 UvsW helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism 1 74565 76310
YP_007676735.1 NC_020871_p67 hypothetical protein phrog_26070 unknown function unknown function 1 37071 37268
YP_007676725.1 NC_020871_p57 hypothetical protein phrog_1215 unknown function unknown function -1 31513 31749
YP_007676781.1 NC_020871_p113 hypothetical protein phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 85815 86435
YP_007676780.1 NC_020871_p112 hypothetical protein phrog_1095 unknown function unknown function 1 85390 85812
YP_007676759.1 NC_020871_p91 hypothetical protein phrog_1011 virion structural protein head and packaging 1 61243 61956
YP_007676778.1 NC_020871_p110 hypothetical protein phrog_10262 unknown function unknown function 1 84853 85077
YP_007676843.1 NC_020871_p175 hypothetical protein phrog_5149 unknown function unknown function 1 131541 131762
YP_007676682.1 NC_020871_p14 hypothetical protein phrog_923 unknown function unknown function 1 6973 7488
YP_007676728.1 NC_020871_p60 hypothetical protein phrog_15252 unknown function unknown function -1 32525 32794
YP_007676738.1 NC_020871_p70 endolysin phrog_5182 endolysin lysis 1 38330 39355
YP_007676802.1 NC_020871_p134 sigma factor phrog_1025 RNA polymerase sigma factor transcription regulation 1 106636 107274
YP_007676711.1 NC_020871_p43 hypothetical protein phrog_1017 unknown function unknown function -1 20331 20834
YP_007676732.1 NC_020871_p64 terminase, small subunit phrog_5340 terminase large subunit head and packaging 1 33974 34255
YP_007676790.1 NC_020871_p122 hypothetical protein phrog_9795 unknown function unknown function 1 91846 91983
YP_007676812.1 NC_020871_p144 hypothetical protein phrog_2356 unknown function unknown function 1 113149 113631
YP_007676729.1 NC_020871_p61 hypothetical protein phrog_3395 membrane protein moron, auxiliary metabolic gene and host takeover 1 32910 33296
YP_007676746.1 NC_020871_p78 hypothetical protein phrog_9462 unknown function unknown function 1 46131 46481
YP_007676786.1 NC_020871_p118 flavodoxin phrog_883 flavodoxin moron, auxiliary metabolic gene and host takeover 1 90402 90827
YP_007676840.1 NC_020871_p172 hypothetical protein phrog_13948 unknown function unknown function 1 130365 130592
YP_007676709.1 NC_020871_p41 hypothetical protein phrog_1460 tRNA amidotransferase DNA, RNA and nucleotide metabolism -1 19606 20142
YP_007676808.1 NC_020871_p140 hypothetical protein phrog_7143 unknown function unknown function 1 111192 111575
YP_007676832.1 NC_020871_p164 hypothetical protein phrog_3543 unknown function unknown function 1 126778 127137
YP_007676838.1 NC_020871_p170 hypothetical protein phrog_11937 unknown function unknown function 1 129515 129967
YP_007676762.1 NC_020871_p94 baseplate protein phrog_6 baseplate wedge subunit tail 1 63205 64251
YP_007676789.1 NC_020871_p121 hypothetical protein phrog_9691 thioredoxin domain DNA, RNA and nucleotide metabolism 1 91436 91843
YP_007676752.1 NC_020871_p84 tail sheath protein phrog_279 tail sheath tail 1 49998 51686
YP_007676824.1 NC_020871_p156 hypothetical protein phrog_1007 unknown function unknown function 1 121109 121837
YP_007676813.1 NC_020871_p145 hypothetical protein phrog_1113 unknown function unknown function 1 113691 114575
YP_007676706.1 NC_020871_p38 hypothetical protein phrog_1238 phosphoheptose isomerase moron, auxiliary metabolic gene and host takeover -1 17836 18213
YP_007676720.1 NC_020871_p52 hypothetical protein phrog_6885 unknown function unknown function -1 25922 26140
YP_007676696.1 NC_020871_p28 hypothetical protein phrog_14763 unknown function unknown function -1 12343 12567
YP_007676811.1 NC_020871_p143 hypothetical protein phrog_984 unknown function unknown function 1 112431 113138
YP_007676671.1 NC_020871_p3 hypothetical protein phrog_10584 unknown function unknown function 1 1277 1450
YP_007676827.1 NC_020871_p159 hypothetical protein phrog_9719 unknown function unknown function 1 123585 124154
YP_007676690.1 NC_020871_p22 hypothetical protein phrog_10214 unknown function unknown function 1 9766 10122
YP_007676842.1 NC_020871_p174 hypothetical protein phrog_4264 unknown function unknown function 1 131026 131367
YP_007676806.1 NC_020871_p138 hypothetical protein phrog_1850 exopolyphosphatase other 1 108912 109841
YP_007676807.1 NC_020871_p139 hypothetical protein phrog_284 exonuclease DNA, RNA and nucleotide metabolism 1 109900 111171
YP_007676737.1 NC_020871_p69 hypothetical protein phrog_1991 unknown function unknown function 1 37886 38266
YP_007676743.1 NC_020871_p75 prohead protease phrog_1028 head maturation protease head and packaging 1 42790 43584