| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_021063 |
Definition |
Mycobacterium phage vB_MapS_FF47, complete genome. |
Molecule type |
DNA |
Genome structure |
circular |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Mapvirus. |
DB of origin |
REFSEQ |
Length |
47724 |
Host Name |
Mycobacterium avium |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
73 |
%GC |
58.63 |
Number of singletons |
8 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_007869933.1 | NC_021063_p9 | hypothetical protein | phrog_1793 | head scaffolding protein | head and packaging | 1 | 5790 | 6386 |
| YP_007869943.1 | NC_021063_p19 | hypothetical protein | phrog_3656 | tail assembly chaperone | tail | 1 | 11043 | 11405 |
| YP_007869994.1 | NC_021063_p70 | hypothetical protein | phrog_32690 | unknown function | unknown function | 1 | 46381 | 46779 |
| YP_007869992.1 | NC_021063_p68 | hypothetical protein | phrog_36932 | unknown function | unknown function | 1 | 45762 | 46067 |
| YP_007869972.1 | NC_021063_p48 | hypothetical protein | phrog_13667 | unknown function | unknown function | -1 | 35474 | 36367 |
| YP_007869946.1 | NC_021063_p22 | hypothetical protein | phrog_110 | minor tail protein | tail | 1 | 15896 | 17782 |
| YP_007869934.1 | NC_021063_p10 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 6426 | 7418 |
| YP_007869957.1 | NC_021063_p33 | peptidoglycan-binding domain containing protein | phrog_102 | endolysin | lysis | 1 | 25080 | 26267 |
| YP_007869935.1 | NC_021063_p11 | hypothetical protein | phrog_35385 | unknown function | unknown function | 1 | 7421 | 7696 |
| YP_007869928.1 | NC_021063_p4 | hypothetical protein | singleton | unknown function | unknown function | 1 | 927 | 1151 |
| YP_007869991.1 | NC_021063_p67 | hypothetical protein | phrog_14975 | unknown function | unknown function | 1 | 45530 | 45775 |
| YP_007869995.1 | NC_021063_p71 | hypothetical protein | phrog_29561 | unknown function | unknown function | 1 | 46776 | 47099 |
| YP_007869926.1 | NC_021063_p2 | hypothetical protein | phrog_32197 | unknown function | unknown function | 1 | 195 | 521 |
| YP_007869929.1 | NC_021063_p5 | hypothetical protein | phrog_226 | minor tail protein | tail | 1 | 1302 | 1775 |
| YP_007869974.1 | NC_021063_p50 | thymidylate kinase | phrog_761 | thymidylate kinase | other | -1 | 36822 | 37370 |
| YP_007869941.1 | NC_021063_p17 | hypothetical protein | phrog_1550 | QueC-like queuosine biosynthesis | moron, auxiliary metabolic gene and host takeover | 1 | 9920 | 10525 |
| YP_007869958.1 | NC_021063_p34 | hypothetical protein | phrog_16498 | unknown function | unknown function | 1 | 26381 | 26761 |
| YP_007869990.1 | NC_021063_p66 | hypothetical protein | phrog_1540 | unknown function | unknown function | 1 | 45076 | 45546 |
| YP_007869964.1 | NC_021063_p40 | hypothetical protein | phrog_30353 | unknown function | unknown function | -1 | 28561 | 28956 |
| YP_007869944.1 | NC_021063_p20 | tail length tape measure protein | phrog_971 | endolysin | lysis | 1 | 11405 | 14815 |
| YP_007869947.1 | NC_021063_p23 | hypothetical protein | phrog_1697 | minor tail protein | tail | 1 | 17782 | 18225 |
| YP_007869932.1 | NC_021063_p8 | hypothetical protein | phrog_193 | head maturation protease | head and packaging | 1 | 4934 | 5530 |
| YP_007869970.1 | NC_021063_p46 | deoxycytidylate deaminase | phrog_174 | dCMP deaminase | DNA, RNA and nucleotide metabolism | -1 | 34159 | 34701 |
| YP_007869969.1 | NC_021063_p45 | DNA polymerase I | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 31839 | 34250 |
| YP_007869996.1 | NC_021063_p72 | hypothetical protein | singleton | unknown function | unknown function | 1 | 47096 | 47314 |
| YP_007869955.1 | NC_021063_p31 | hypothetical protein | phrog_6071 | unknown function | unknown function | 1 | 24509 | 24709 |
| YP_007869953.1 | NC_021063_p29 | hypothetical protein | phrog_6116 | holin | lysis | 1 | 24010 | 24228 |
| YP_007869948.1 | NC_021063_p24 | minor tail subunit | phrog_1565 | minor tail protein | tail | 1 | 18222 | 19322 |
| YP_007869984.1 | NC_021063_p60 | hypothetical protein | phrog_11565 | unknown function | unknown function | 1 | 43188 | 43328 |
| YP_007869981.1 | NC_021063_p57 | hypothetical protein | singleton | unknown function | unknown function | 1 | 41975 | 42103 |
| YP_007869959.1 | NC_021063_p35 | hypothetical protein | phrog_15118 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 26904 | 27293 |
| YP_007869978.1 | NC_021063_p54 | hypothetical protein | phrog_17534 | unknown function | unknown function | -1 | 39250 | 39432 |
| YP_007869940.1 | NC_021063_p16 | major tail subunit | phrog_117 | major tail protein | tail | 1 | 9310 | 9951 |
| YP_007869931.1 | NC_021063_p7 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 3436 | 4959 |
| YP_007869993.1 | NC_021063_p69 | endonuclease | phrog_333 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 46067 | 46366 |
| YP_007869925.1 | NC_021063_p1 | hypothetical protein | phrog_38300 | unknown function | unknown function | 1 | 1 | 38 |
| YP_007869925.1 | NC_021063_p1 | hypothetical protein | phrog_38300 | unknown function | unknown function | 1 | 47490 | 47724 |
| YP_007869987.1 | NC_021063_p63 | hypothetical protein | phrog_31858 | unknown function | unknown function | 1 | 44399 | 44587 |
| YP_007869965.1 | NC_021063_p41 | hypothetical protein | phrog_34418 | unknown function | unknown function | -1 | 28949 | 29338 |
| YP_007869961.1 | NC_021063_p37 | hypothetical protein | phrog_37790 | unknown function | unknown function | 1 | 27524 | 27937 |
| YP_007869960.1 | NC_021063_p36 | hypothetical protein | singleton | unknown function | unknown function | 1 | 27256 | 27396 |
| YP_007869986.1 | NC_021063_p62 | hypothetical protein | phrog_16564 | unknown function | unknown function | 1 | 43675 | 44343 |
| YP_007869973.1 | NC_021063_p49 | dUTPase | phrog_12184 | nucleotide pyrophosphohydrolase | other | -1 | 36367 | 36825 |
| YP_007869968.1 | NC_021063_p44 | hypothetical protein | phrog_1218 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 30833 | 31849 |
| YP_007869967.1 | NC_021063_p43 | hypothetical protein | phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 29991 | 30836 |
| YP_007869971.1 | NC_021063_p47 | thymidylate synthase | phrog_160 | thymidylate synthase | DNA, RNA and nucleotide metabolism | -1 | 34698 | 35471 |
| YP_007869988.1 | NC_021063_p64 | hypothetical protein | singleton | unknown function | unknown function | 1 | 44584 | 44781 |
| YP_007869954.1 | NC_021063_p30 | hypothetical protein | phrog_4511 | unknown function | unknown function | 1 | 24225 | 24509 |
| YP_007869927.1 | NC_021063_p3 | hypothetical protein | phrog_28565 | unknown function | unknown function | 1 | 518 | 787 |
| YP_007869938.1 | NC_021063_p14 | hypothetical protein | phrog_387 | neck protein | connector | 1 | 8559 | 8879 |
| YP_007869979.1 | NC_021063_p55 | hypothetical protein | phrog_13148 | unknown function | unknown function | -1 | 39436 | 39855 |
| YP_007869949.1 | NC_021063_p25 | hypothetical protein | phrog_746 | minor tail protein | tail | 1 | 19326 | 21644 |
| YP_007869976.1 | NC_021063_p52 | hypothetical protein | singleton | unknown function | unknown function | -1 | 38821 | 39075 |
| YP_007869936.1 | NC_021063_p12 | hypothetical protein | phrog_1290 | head-tail adaptor | connector | 1 | 7715 | 8191 |
| YP_007869989.1 | NC_021063_p65 | hypothetical protein | phrog_658 | unknown function | unknown function | 1 | 44778 | 45089 |
| YP_007869997.1 | NC_021063_p73 | hypothetical protein | singleton | unknown function | unknown function | 1 | 47311 | 47490 |
| YP_007869983.1 | NC_021063_p59 | hypothetical protein | phrog_34004 | unknown function | unknown function | 1 | 42947 | 43195 |
| YP_007869930.1 | NC_021063_p6 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 1775 | 3439 |
| YP_007869950.1 | NC_021063_p26 | hypothetical protein | phrog_416 | minor tail protein | tail | 1 | 21654 | 22679 |
| YP_007869945.1 | NC_021063_p21 | hypothetical protein | phrog_106 | minor tail protein | tail | 1 | 14818 | 15930 |
| YP_007869937.1 | NC_021063_p13 | hypothetical protein | phrog_763 | head-tail adaptor | connector | 1 | 8188 | 8562 |
| YP_007869975.1 | NC_021063_p51 | DNA/RNA helicase | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 37371 | 38882 |
| YP_007869980.1 | NC_021063_p56 | RepA | phrog_3123 | unknown function | unknown function | 1 | 39928 | 41853 |
| YP_007869939.1 | NC_021063_p15 | hypothetical protein | phrog_123 | tail terminator | connector | 1 | 8879 | 9313 |
| YP_007869977.1 | NC_021063_p53 | hypothetical protein | phrog_33511 | unknown function | unknown function | -1 | 39047 | 39253 |
| YP_007869956.1 | NC_021063_p32 | hypothetical protein | phrog_3798 | unknown function | unknown function | 1 | 24709 | 25119 |
| YP_007869951.1 | NC_021063_p27 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 22689 | 23051 |
| YP_007869942.1 | NC_021063_p18 | hypothetical protein | phrog_32580 | tail assembly chaperone | tail | 1 | 10606 | 10998 |
| YP_007869952.1 | NC_021063_p28 | endolysin | phrog_1512 | endolysin | lysis | 1 | 23066 | 24013 |
| YP_007869982.1 | NC_021063_p58 | hypothetical protein | phrog_28441 | unknown function | unknown function | 1 | 42093 | 42950 |
| YP_007869962.1 | NC_021063_p38 | hypothetical protein | singleton | unknown function | unknown function | 1 | 27994 | 28227 |
| YP_007869963.1 | NC_021063_p39 | VRR-NUC domain containing protein | phrog_93 | endonuclease | DNA, RNA and nucleotide metabolism | -1 | 28287 | 28571 |
| YP_007869985.1 | NC_021063_p61 | hypothetical protein | phrog_28269 | unknown function | unknown function | 1 | 43316 | 43678 |
| YP_007869966.1 | NC_021063_p42 | hypothetical protein | phrog_14876 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 29357 | 30004 |