Genomic map of Mycobacterium phage Fishburne (NC_021302)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_021302
Definition
Mycobacterium phage Fishburne, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pclasvirinae; Fishburnevirus.
DB of origin
REFSEQ
Length
47109
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
77
%GC
67.26
Number of singletons
0
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_008051226.1 NC_021302_p1 terminase small subunit phrog_1496 terminase small subunit head and packaging 1 55 444
YP_008051229.1 NC_021302_p4 capsid maturation protease phrog_2976 head maturation protease head and packaging 1 3551 4888
YP_008051228.1 NC_021302_p3 portal protein phrog_113 portal protein head and packaging 1 2106 3560
YP_008051262.1 NC_021302_p37 hypothetical protein phrog_5015 unknown function unknown function 1 29343 29744
YP_008051232.1 NC_021302_p7 hypothetical protein phrog_2322 head-tail connector protein connector 1 6238 6588
YP_008051251.1 NC_021302_p26 lysin A phrog_6707 endolysin lysis 1 23120 24055
YP_008051242.1 NC_021302_p17 tape measure protein phrog_2337 tail length tape measure protein tail 1 10873 14643
YP_008051285.1 NC_021302_p60 hypothetical protein phrog_8769 methyltransferase other 1 39845 40051
YP_008051235.1 NC_021302_p10 hypothetical protein phrog_2322 head-tail connector protein connector 1 7319 7663
YP_008051294.1 NC_021302_p69 hypothetical protein phrog_7429 unknown function unknown function 1 44113 44325
YP_008051281.1 NC_021302_p56 hypothetical protein phrog_5921 unknown function unknown function 1 37477 37629
YP_008051277.1 NC_021302_p52 hypothetical protein phrog_780 unknown function unknown function 1 36036 36263
YP_008051300.1 NC_021302_p75 hypothetical protein phrog_1186 unknown function unknown function 1 45910 46278
YP_008051271.1 NC_021302_p46 RecT phrog_148 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 32543 33535
YP_008051261.1 NC_021302_p36 hypothetical protein phrog_9041 unknown function unknown function 1 29098 29346
YP_008051233.1 NC_021302_p8 head-to-tail connector complex protein phrog_137 head-tail adaptor Ad1 connector 1 6592 6954
YP_008051257.1 NC_021302_p32 hypothetical protein phrog_66 excisionase and transcriptional regulator integration and excision 1 27464 27709
YP_008051273.1 NC_021302_p48 FtsK-like protein phrog_6152 unknown function unknown function 1 33810 34877
YP_008051259.1 NC_021302_p34 antirepressor phrog_130 anti-repressor Ant transcription regulation 1 27939 28805
YP_008051244.1 NC_021302_p19 minor tail protein phrog_110 minor tail protein tail 1 16385 18121
YP_008051275.1 NC_021302_p50 hypothetical protein phrog_6109 unknown function unknown function 1 35371 35613
YP_008051248.1 NC_021302_p23 hypothetical protein phrog_6374 unknown function unknown function 1 22351 22500
YP_008051247.1 NC_021302_p22 hypothetical protein phrog_416 minor tail protein tail 1 21299 22336
YP_008051227.1 NC_021302_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 413 2089
YP_008051239.1 NC_021302_p14 major tail subunit phrog_476 major tail protein tail 1 8834 9832
YP_008051236.1 NC_021302_p11 hypothetical protein phrog_4307 unknown function unknown function 1 7663 7932
YP_008051298.1 NC_021302_p73 hypothetical protein phrog_4738 transcriptional repressor transcription regulation 1 45082 45255
YP_008051293.1 NC_021302_p68 hypothetical protein phrog_5855 unknown function unknown function 1 43537 44037
YP_008051276.1 NC_021302_p51 hypothetical protein phrog_3821 unknown function unknown function 1 35610 35894
YP_008051249.1 NC_021302_p24 hypothetical protein phrog_240 head protein head and packaging 1 22517 22879
YP_008051240.1 NC_021302_p15 tail assembly chaperone phrog_621 tail assembly chaperone tail 1 9941 10859
YP_008051255.2 NC_021302_p30 integrase phrog_1 integrase integration and excision -1 25919 26875
YP_008051296.1 NC_021302_p71 hypothetical protein phrog_4550 unknown function unknown function 1 44712 44885
YP_008051289.1 NC_021302_p64 hypothetical protein phrog_908 unknown function unknown function 1 41860 42762
YP_008051269.1 NC_021302_p44 hypothetical protein phrog_4702 unknown function unknown function 1 31471 31620
YP_008051237.1 NC_021302_p12 hypothetical protein phrog_2325 minor tail protein tail 1 7932 8309
YP_008051234.1 NC_021302_p9 head-to-tail connector complex protein phrog_6553 head closure Hc1 connector 1 6954 7304
YP_008051299.1 NC_021302_p74 hypothetical protein phrog_6617 unknown function unknown function 1 45455 45913
YP_008051292.1 NC_021302_p67 hypothetical protein phrog_10505 unknown function unknown function 1 43282 43464
YP_008051295.1 NC_021302_p70 hypothetical protein phrog_2202 unknown function unknown function 1 44389 44715
YP_008051283.1 NC_021302_p58 hypothetical protein phrog_25269 unknown function unknown function 1 38945 39733
YP_008051291.1 NC_021302_p66 hypothetical protein phrog_2074 unknown function unknown function 1 43028 43282
YP_008051231.1 NC_021302_p6 major capsid protein phrog_1650 major head protein head and packaging 1 5294 6238
YP_008051282.1 NC_021302_p57 DNA methylase phrog_67 DNA methyltransferase other 1 37732 38952
YP_008051252.1 NC_021302_p27 lysin B phrog_102 endolysin lysis 1 24052 25218
YP_008051243.1 NC_021302_p18 minor tail protein phrog_106 minor tail protein tail 1 14640 16385
YP_008051286.1 NC_021302_p61 HTH DNA binding protein phrog_1408 replication initiation protein DNA, RNA and nucleotide metabolism 1 40183 41073
YP_008051256.1 NC_021302_p31 immunity repressor phrog_2328 transcriptional repressor transcription regulation -1 26946 27347
YP_008051270.1 NC_021302_p45 RecE phrog_412 exonuclease VIII DNA, RNA and nucleotide metabolism 1 31617 32546
YP_008051253.1 NC_021302_p28 hypothetical protein phrog_443 holin lysis 1 25240 25488
YP_008051280.1 NC_021302_p55 HTH DNA binding protein phrog_7170 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 36816 37484
YP_008051245.1 NC_021302_p20 minor tail protein phrog_732 minor tail protein tail 1 18144 19037
YP_008051246.1 NC_021302_p21 minor tail protein phrog_3493 minor tail protein tail 1 19038 21299
YP_008051238.1 NC_021302_p13 head-to-tail connector complex protein phrog_813 head-tail adaptor connector 1 8306 8743
YP_008051268.1 NC_021302_p43 hypothetical protein phrog_5806 unknown function unknown function 1 31257 31388
YP_008051258.1 NC_021302_p33 hypothetical protein phrog_1622 unknown function unknown function 1 27706 27942
YP_008051284.1 NC_021302_p59 hypothetical protein phrog_7789 unknown function unknown function 1 39733 39822
YP_008051279.1 NC_021302_p54 hypothetical protein phrog_17383 DNA binding protein DNA, RNA and nucleotide metabolism 1 36580 36819
YP_008051266.1 NC_021302_p41 hypothetical protein phrog_5803 unknown function unknown function 1 30812 31084
YP_008051290.1 NC_021302_p65 hypothetical protein phrog_16825 unknown function unknown function 1 42759 43031
YP_008051260.1 NC_021302_p35 hypothetical protein phrog_3507 unknown function unknown function 1 28802 29101
YP_008051241.1 NC_021302_p16 tail assembly chaperone phrog_621 tail assembly chaperone tail 1 9941 10540
YP_008051287.1 NC_021302_p62 hypothetical protein phrog_3599 unknown function unknown function 1 41070 41600
YP_008051264.1 NC_021302_p39 hypothetical protein phrog_4656 unknown function unknown function 1 30310 30543
YP_008051250.1 NC_021302_p25 hypothetical protein phrog_1172 unknown function unknown function 1 22879 23049
YP_008051274.1 NC_021302_p49 RusA-like protein phrog_140 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 34877 35377
YP_008051263.1 NC_021302_p38 hypothetical protein phrog_658 unknown function unknown function 1 29807 30310
YP_008051278.1 NC_021302_p53 hypothetical protein phrog_2060 DNA methyltransferase other 1 36260 36583
YP_008051302.1 NC_021302_p77 hypothetical protein phrog_1808 HNH endonuclease DNA, RNA and nucleotide metabolism 1 46518 46901
YP_008051230.1 NC_021302_p5 scaffolding protein phrog_673 head scaffolding protein head and packaging 1 4892 5257
YP_008051297.1 NC_021302_p72 hypothetical protein phrog_10254 unknown function unknown function 1 44882 45073
YP_008051267.1 NC_021302_p42 hypothetical protein phrog_5559 unknown function unknown function 1 31081 31260
YP_008051265.1 NC_021302_p40 hypothetical protein phrog_4981 unknown function unknown function 1 30540 30815
YP_008051272.1 NC_021302_p47 hypothetical protein phrog_4387 unknown function unknown function 1 33532 33813
YP_008051254.1 NC_021302_p29 hypothetical protein phrog_404 minor tail protein tail 1 25485 25844
YP_008051288.1 NC_021302_p63 hypothetical protein phrog_7254 unknown function unknown function 1 41597 41863
YP_008051301.1 NC_021302_p76 hypothetical protein phrog_7285 unknown function unknown function 1 46265 46513