Genomic map of Streptomyces phage Sujidade (NC_021304)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_021304
Definition
Streptomyces phage Sujidade, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Arquatrovirinae; Likavirus.
DB of origin
REFSEQ
Length
51552
Host Name
Streptomyces lividans
Host domain
Bacteria
Is prophage?
undef
Number of proteins
77
%GC
65.7
Number of singletons
2
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_008051450.1 NC_021304_p48 ribonucleotide reductase phrog_367 ribonucleotide reductase DNA, RNA and nucleotide metabolism 1 32754 34844
YP_008051446.1 NC_021304_p44 hypothetical protein phrog_284 exonuclease DNA, RNA and nucleotide metabolism 1 30307 31497
YP_008051451.1 NC_021304_p49 Lsr2-like protein phrog_6509 Lsr2-like DNA bridging protein DNA, RNA and nucleotide metabolism 1 34905 35120
YP_008051407.1 NC_021304_p5 thioredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 1950 2207
YP_008051477.1 NC_021304_p75 hypothetical protein phrog_4485 unknown function unknown function -1 50125 50244
YP_008051414.1 NC_021304_p12 hypothetical protein phrog_137 head-tail adaptor Ad1 connector 1 8602 9108
YP_008051404.1 NC_021304_p2 HNH endonuclease phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 723 1034
YP_008051463.1 NC_021304_p61 hypothetical protein phrog_5209 unknown function unknown function -1 44165 44470
YP_008051415.1 NC_021304_p13 hypothetical protein phrog_320 head closure Hc1 connector 1 9105 9440
YP_008051421.1 NC_021304_p19 tape measure phrog_305 tail length tape measure protein tail 1 11947 15270
YP_008051429.1 NC_021304_p27 hypothetical protein phrog_1493 endolysin lysis 1 21949 23037
YP_008051449.1 NC_021304_p47 hypothetical protein phrog_4123 unknown function unknown function 1 32278 32655
YP_008051461.1 NC_021304_p59 hypothetical protein phrog_4024 unknown function unknown function -1 43309 43545
YP_008051448.1 NC_021304_p46 hypothetical protein phrog_3512 sigma factor transcription regulation 1 31883 32281
YP_008051412.1 NC_021304_p10 scaffold protein phrog_233 head scaffolding protein head and packaging 1 6900 7445
YP_008051444.1 NC_021304_p42 hypothetical protein phrog_6217 unknown function unknown function 1 29926 30099
YP_008051419.1 NC_021304_p17 tail assembly chaperone phrog_978 tail assembly chaperone tail 1 11228 11943
YP_008051447.1 NC_021304_p45 hypothetical protein phrog_1340 unknown function unknown function 1 31524 31883
YP_008051426.1 NC_021304_p24 hypothetical protein phrog_4817 unknown function unknown function 1 19649 20149
YP_008051466.1 NC_021304_p64 hypothetical protein phrog_9778 unknown function unknown function -1 45095 45271
YP_008051478.1 NC_021304_p76 hypothetical protein phrog_2563 unknown function unknown function -1 50344 50748
YP_008051474.1 NC_021304_p72 hypothetical protein phrog_4275 unknown function unknown function -1 48286 48411
YP_008051457.1 NC_021304_p55 DNA polymerase III subunit alpha phrog_405 DNA polymerase DNA, RNA and nucleotide metabolism -1 38570 42046
YP_008051438.1 NC_021304_p36 DnaB-like helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 27330 28085
YP_008051408.1 NC_021304_p6 hypothetical protein phrog_226 minor tail protein tail 1 2226 2651
YP_008051427.1 NC_021304_p25 hypothetical protein phrog_988 tail protein tail 1 20225 21571
YP_008051445.1 NC_021304_p43 hypothetical protein phrog_3979 unknown function unknown function 1 30096 30314
YP_008051468.1 NC_021304_p66 hypothetical protein phrog_4867 unknown function unknown function -1 45636 46001
YP_008051453.1 NC_021304_p51 ThyX phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism -1 37096 37812
YP_008051436.1 NC_021304_p34 hypothetical protein phrog_1288 unknown function unknown function 1 26284 26721
YP_008051406.1 NC_021304_p4 hypothetical protein singleton unknown function unknown function 1 1678 1953
YP_008051467.1 NC_021304_p65 hypothetical protein phrog_4785 unknown function unknown function -1 45268 45552
YP_008051422.1 NC_021304_p20 hypothetical protein phrog_33 distal tail protein Dit tail 1 15274 16131
YP_008051403.1 NC_021304_p1 hypothetical protein phrog_4207 unknown function unknown function -1 91 297
YP_008051464.1 NC_021304_p62 hypothetical protein phrog_3991 unknown function unknown function -1 44467 44709
YP_008051441.1 NC_021304_p39 DNA primase phrog_360 DNA primase DNA, RNA and nucleotide metabolism 1 28652 29086
YP_008051433.1 NC_021304_p31 hypothetical protein phrog_5250 unknown function unknown function 1 24305 24607
YP_008051462.1 NC_021304_p60 dNMP kinase phrog_139 deoxynucleoside monophosphate kinase other -1 43584 44168
YP_008051428.1 NC_021304_p26 hypothetical protein phrog_3534 unknown function unknown function 1 21571 21924
YP_008051471.1 NC_021304_p69 hypothetical protein phrog_3908 unknown function unknown function -1 47101 47304
YP_008051443.1 NC_021304_p41 hypothetical protein phrog_4022 unknown function unknown function 1 29582 29929
YP_008051455.1 NC_021304_p53 hypothetical protein phrog_5971 unknown function unknown function -1 38087 38269
YP_008051420.1 NC_021304_p18 tail assembly chaperone phrog_330 tail assembly chaperone tail 1 11228 11551
YP_008051423.1 NC_021304_p21 hypothetical protein phrog_538 minor tail protein tail 1 16135 17346
YP_008051417.1 NC_021304_p15 hypothetical protein phrog_123 tail terminator connector 1 9838 10341
YP_008051472.1 NC_021304_p70 hypothetical protein phrog_4239 unknown function unknown function -1 47307 47762
YP_008051460.1 NC_021304_p58 hypothetical protein phrog_3965 unknown function unknown function -1 42794 43225
YP_008051424.1 NC_021304_p22 hypothetical protein phrog_1276 unknown function unknown function 1 17350 17646
YP_008051435.1 NC_021304_p33 hypothetical protein phrog_3912 unknown function unknown function 1 25698 26216
YP_008051442.1 NC_021304_p40 DNA primase phrog_849 DNA primase DNA, RNA and nucleotide metabolism 1 28920 29585
YP_008051470.1 NC_021304_p68 HNH domain protein phrog_4842 HNH endonuclease DNA, RNA and nucleotide metabolism -1 46527 47000
YP_008051440.1 NC_021304_p38 hypothetical protein phrog_4673 unknown function unknown function 1 28513 28665
YP_008051410.1 NC_021304_p8 portal protein phrog_104 portal protein head and packaging 1 4351 5787
YP_008051432.1 NC_021304_p30 immunity repressor phrog_3929 transcriptional repressor transcription regulation 1 23705 24157
YP_008051425.1 NC_021304_p23 hypothetical protein phrog_4013 unknown function unknown function 1 17648 19633
YP_008051418.1 NC_021304_p16 hypothetical protein phrog_117 major tail protein tail 1 10358 11113
YP_008051459.1 NC_021304_p57 hypothetical protein phrog_22195 unknown function unknown function -1 42293 42775
YP_008051476.1 NC_021304_p74 hypothetical protein phrog_3994 unknown function unknown function -1 49608 50093
YP_008051431.1 NC_021304_p29 hypothetical protein phrog_4061 unknown function unknown function -1 23358 23618
YP_008051458.1 NC_021304_p56 hypothetical protein phrog_3424 unknown function unknown function -1 42043 42279
YP_008051434.1 NC_021304_p32 hypothetical protein phrog_466 exonuclease DNA, RNA and nucleotide metabolism 1 24604 25575
YP_008051439.1 NC_021304_p37 hypothetical protein phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 28154 28516
YP_008051475.1 NC_021304_p73 hypothetical protein phrog_4313 unknown function unknown function -1 48510 49487
YP_008051479.1 NC_021304_p77 hypothetical protein singleton unknown function unknown function 1 50831 51109
YP_008051456.1 NC_021304_p54 hypothetical protein phrog_20783 unknown function unknown function -1 38266 38553
YP_008051405.1 NC_021304_p3 hypothetical protein phrog_3555 unknown function unknown function 1 1428 1658
YP_008051409.1 NC_021304_p7 terminase large subunit phrog_9 terminase large subunit head and packaging 1 2672 4318
YP_008051413.1 NC_021304_p11 major capsid protein phrog_283 major head protein head and packaging 1 7516 8589
YP_008051430.1 NC_021304_p28 hypothetical protein phrog_4092 unknown function unknown function 1 23034 23303
YP_008051411.1 NC_021304_p9 hypothetical protein phrog_193 head maturation protease head and packaging 1 5784 6896
YP_008051452.1 NC_021304_p50 integrase phrog_95 integrase integration and excision 1 35406 36983
YP_008051416.1 NC_021304_p14 hypothetical protein phrog_321 tail completion or Neck1 protein connector 1 9440 9838
YP_008051437.1 NC_021304_p35 dCMP deaminase phrog_174 dCMP deaminase DNA, RNA and nucleotide metabolism 1 26794 27273
YP_008051473.1 NC_021304_p71 hypothetical protein phrog_2355 unknown function unknown function -1 47853 48272
YP_008051465.1 NC_021304_p63 hypothetical protein phrog_9416 unknown function unknown function -1 44706 45011
YP_008051469.1 NC_021304_p67 hypothetical protein phrog_22195 unknown function unknown function -1 45998 46444
YP_008051454.1 NC_021304_p52 hypothetical protein phrog_4071 unknown function unknown function -1 37809 38084