Genomic map of Mycobacterium phage Murphy (NC_021305)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_021305
Definition
Mycobacterium phage Murphy, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Kostyavirus; unclassified Kostyavirus.
DB of origin
REFSEQ
Length
76179
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
146
%GC
62.92
Number of singletons
0
Number of paralogs
3

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_008051482.1 NC_021305_p3 hypothetical protein phrog_2775 unknown function unknown function 1 601 786
YP_008051604.1 NC_021305_p125 hypothetical protein phrog_2579 ParB C-terminal domain DNA, RNA and nucleotide metabolism -1 69322 69711
YP_008051481.1 NC_021305_p2 hypothetical protein phrog_2829 unknown function unknown function 1 446 604
YP_008051536.1 NC_021305_p57 immunity repressor phrog_2745 transcriptional repressor transcription regulation -1 40079 40510
YP_008051522.1 NC_021305_p43 hypothetical protein phrog_5831 unknown function unknown function -1 34879 35061
YP_008051564.1 NC_021305_p85 hypothetical protein phrog_3836 unknown function unknown function 1 52277 52642
YP_008051616.1 NC_021305_p137 hypothetical protein phrog_1438 unknown function unknown function -1 73323 73496
YP_008051578.1 NC_021305_p99 DNA methylase phrog_67 DNA methyltransferase other 1 58919 60163
YP_008051520.1 NC_021305_p41 hypothetical protein phrog_647 unknown function unknown function -1 34167 34631
YP_008051501.1 NC_021305_p22 HNH endonuclease phrog_2914 endonuclease VII DNA, RNA and nucleotide metabolism 1 12799 13311
YP_008051527.1 NC_021305_p48 hypothetical protein phrog_861 site-specific recombination directionality factor RDF integration and excision -1 35966 36133
YP_008051506.1 NC_021305_p27 minor tail protein phrog_346 minor tail protein tail 1 22263 24659
YP_008051607.1 NC_021305_p128 hypothetical protein phrog_3034 unknown function unknown function -1 70154 70522
YP_008051513.1 NC_021305_p34 holin phrog_526 holin lysis 1 31126 31509
YP_008051596.1 NC_021305_p117 hypothetical protein phrog_2174 unknown function unknown function 1 67336 67749
YP_008051510.1 NC_021305_p31 hypothetical protein phrog_686 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 28944 29129
YP_008051601.1 NC_021305_p122 hypothetical protein phrog_2897 unknown function unknown function 1 68407 68538
YP_008051497.1 NC_021305_p18 major tail subunit phrog_476 major tail protein tail 1 10307 11281
YP_008051504.1 NC_021305_p25 minor tail protein phrog_110 minor tail protein tail 1 19809 21404
YP_008051480.1 NC_021305_p1 hypothetical protein phrog_4110 unknown function unknown function 1 267 449
YP_008051483.1 NC_021305_p4 hypothetical protein phrog_3858 unknown function unknown function 1 783 1064
YP_008051551.1 NC_021305_p72 hypothetical protein phrog_1389 unknown function unknown function 1 47317 47685
YP_008051611.1 NC_021305_p132 hypothetical protein phrog_3730 unknown function unknown function -1 71646 71756
YP_008051558.1 NC_021305_p79 hypothetical protein phrog_1882 unknown function unknown function 1 49412 50062
YP_008051533.1 NC_021305_p54 integrase (Y-int) phrog_1 integrase integration and excision 1 37974 38855
YP_008051603.1 NC_021305_p124 hypothetical protein phrog_686 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 69062 69325
YP_008051498.1 NC_021305_p19 hypothetical protein phrog_5711 head fiber protein head and packaging 1 11341 11814
YP_008051620.1 NC_021305_p141 hypothetical protein phrog_5970 unknown function unknown function -1 74166 74414
YP_008051576.1 NC_021305_p97 hypothetical protein phrog_2788 unknown function unknown function 1 58048 58383
YP_008051547.1 NC_021305_p68 hypothetical protein phrog_572 unknown function unknown function 1 45418 45828
YP_008051505.1 NC_021305_p26 minor tail protein phrog_732 minor tail protein tail 1 21413 22246
YP_008051544.1 NC_021305_p65 hypothetical protein phrog_16636 secreted protein other 1 43528 44130
YP_008051560.1 NC_021305_p81 DnaB-like helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 50384 51646
YP_008051566.1 NC_021305_p87 hypothetical protein phrog_2894 unknown function unknown function 1 52998 53192
YP_008051600.1 NC_021305_p121 hypothetical protein phrog_2925 unknown function unknown function 1 68228 68407
YP_008051517.1 NC_021305_p38 NrdH-like protein phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 33114 33359
YP_008051585.1 NC_021305_p106 hypothetical protein phrog_2846 unknown function unknown function 1 63249 63473
YP_008051612.1 NC_021305_p133 hypothetical protein phrog_2287 unknown function unknown function -1 71761 71997
YP_008051579.1 NC_021305_p100 ssDNA binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 60156 60596
YP_008051589.1 NC_021305_p110 DnaQ-like exonuclease phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 64611 65396
YP_008051592.1 NC_021305_p113 hypothetical protein phrog_2965 unknown function unknown function 1 66602 66739
YP_008051562.1 NC_021305_p83 hypothetical protein phrog_1821 transcriptional regulator WhiB-like transcription regulation 1 51813 52088
YP_008051532.1 NC_021305_p53 hypothetical protein phrog_2847 unknown function unknown function -1 37421 37723
YP_008051512.1 NC_021305_p33 lysin A phrog_317 endolysin lysis 1 29620 31122
YP_008051609.1 NC_021305_p130 hypothetical protein phrog_1587 unknown function unknown function -1 70992 71321
YP_008051492.1 NC_021305_p13 hypothetical protein phrog_2796 head-tail connector protein connector 1 8426 8605
YP_008051518.1 NC_021305_p39 Lsr2 phrog_1223 nucloid associated Lsr2-like DNA, RNA and nucleotide metabolism -1 33539 33925
YP_008051552.1 NC_021305_p73 hypothetical protein phrog_572 unknown function unknown function 1 47688 48056
YP_008051610.1 NC_021305_p131 hypothetical protein phrog_4547 unknown function unknown function -1 71323 71640
YP_008051577.1 NC_021305_p98 hypothetical protein phrog_1568 DNA binding protein DNA, RNA and nucleotide metabolism 1 58380 58922
YP_008051543.1 NC_021305_p64 hypothetical protein phrog_2147 unknown function unknown function 1 43216 43515
YP_008051534.1 NC_021305_p55 hypothetical protein phrog_2842 unknown function unknown function 1 38994 39233
YP_008051530.1 NC_021305_p51 hypothetical protein phrog_2815 unknown function unknown function -1 36593 36739
YP_008051555.1 NC_021305_p76 hypothetical protein phrog_289 GTP-binding domain other 1 48462 48875
YP_008051528.1 NC_021305_p49 hypothetical protein phrog_2893 unknown function unknown function -1 36130 36366
YP_008051568.1 NC_021305_p89 hypothetical protein phrog_2495 unknown function unknown function 1 54396 54764
YP_008051583.1 NC_021305_p104 hypothetical protein phrog_1969 unknown function unknown function 1 62141 62452
YP_008051584.1 NC_021305_p105 HNH homing endonuclease domain protein phrog_959 HNH endonuclease DNA, RNA and nucleotide metabolism 1 62505 62795
YP_008051625.1 NC_021305_p146 HNH endonuclease domain protein phrog_589 HNH endonuclease DNA, RNA and nucleotide metabolism 1 75598 75945
YP_008051508.1 NC_021305_p29 hypothetical protein phrog_553 minor tail protein tail 1 27497 28459
YP_008051542.1 NC_021305_p63 hypothetical protein phrog_2744 unknown function unknown function 1 42777 43082
YP_008051572.1 NC_021305_p93 WhiB phrog_472 WhiB transcriptional factor transcription regulation 1 57036 57296
YP_008051602.1 NC_021305_p123 hypothetical protein phrog_3016 unknown function unknown function 1 68522 68683
YP_008051582.1 NC_021305_p103 hypothetical protein phrog_2757 unknown function unknown function 1 61846 62136
YP_008051590.1 NC_021305_p111 hypothetical protein phrog_1941 unknown function unknown function 1 65393 65635
YP_008051500.1 NC_021305_p21 tail assembly chaperone phrog_5940 tail assembly chaperone tail 1 12528 12809
YP_008051486.1 NC_021305_p7 hypothetical protein phrog_2202 unknown function unknown function -1 1829 2137
YP_008051593.1 NC_021305_p114 hypothetical protein phrog_2755 unknown function unknown function 1 66726 66899
YP_008051548.1 NC_021305_p69 Erf protein phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 45821 46543
YP_008051493.1 NC_021305_p14 hypothetical protein phrog_442 head-tail adaptor connector 1 8605 9171
YP_008051594.1 NC_021305_p115 hypothetical protein phrog_2279 unknown function unknown function 1 66892 67104
YP_008051622.1 NC_021305_p143 hypothetical protein phrog_2904 unknown function unknown function 1 74667 75014
YP_008051615.1 NC_021305_p136 hypothetical protein phrog_4496 unknown function unknown function -1 72965 73318
YP_008051598.1 NC_021305_p119 hypothetical protein phrog_2823 unknown function unknown function 1 67897 68097
YP_008051556.1 NC_021305_p77 HNH endonuclease domain protein phrog_740 HNH endonuclease DNA, RNA and nucleotide metabolism 1 48872 49189
YP_008051541.1 NC_021305_p62 hypothetical protein phrog_2800 unknown function unknown function 1 41955 42233
YP_008051535.1 NC_021305_p56 hypothetical protein phrog_950 unknown function unknown function -1 39211 39984
YP_008051575.1 NC_021305_p96 hypothetical protein phrog_7833 unknown function unknown function 1 57924 58046
YP_008051549.1 NC_021305_p70 hypothetical protein phrog_2750 unknown function unknown function 1 46536 46847
YP_008051526.1 NC_021305_p47 hypothetical protein phrog_4396 unknown function unknown function -1 35838 35966
YP_008051605.1 NC_021305_p126 hypothetical protein phrog_2942 unknown function unknown function -1 69831 70082
YP_008051523.1 NC_021305_p44 hypothetical protein phrog_3447 unknown function unknown function -1 35058 35270
YP_008051573.1 NC_021305_p94 hypothetical protein phrog_2853 unknown function unknown function 1 57313 57471
YP_008051580.1 NC_021305_p101 Clp protease phrog_94 head maturation protease head and packaging 1 60686 61492
YP_008051619.1 NC_021305_p140 hypothetical protein phrog_2795 unknown function unknown function -1 73941 74138
YP_008051519.1 NC_021305_p40 hypothetical protein phrog_3481 unknown function unknown function -1 33973 34170
YP_008051524.1 NC_021305_p45 hypothetical protein phrog_722 unknown function unknown function -1 35267 35671
YP_008051484.1 NC_021305_p5 terminase small subunit phrog_83 terminase small subunit head and packaging 1 1057 1518
YP_008051571.1 NC_021305_p92 hypothetical protein phrog_1590 unknown function unknown function 1 56218 57039
YP_008051545.1 NC_021305_p66 hypothetical protein phrog_762 unknown function unknown function 1 44127 44456
YP_008051529.1 NC_021305_p50 hypothetical protein phrog_2702 unknown function unknown function -1 36359 36574
YP_008051570.1 NC_021305_p91 RNA ligase phrog_968 RNA ligase DNA, RNA and nucleotide metabolism 1 54856 56181
YP_008051488.1 NC_021305_p9 hypothetical protein phrog_2845 unknown function unknown function 1 3864 4085
YP_008051550.1 NC_021305_p71 hypothetical protein phrog_2771 unknown function unknown function 1 46847 47317
YP_008051546.1 NC_021305_p67 hypothetical protein phrog_466 exonuclease DNA, RNA and nucleotide metabolism 1 44453 45421
YP_008051502.1 NC_021305_p23 tapemeasure phrog_2723 tail length tape measure protein tail 1 13316 18046
YP_008051503.1 NC_021305_p24 minor tail protein phrog_106 minor tail protein tail 1 18076 19737
YP_008051624.1 NC_021305_p145 hypothetical protein phrog_2762 unknown function unknown function 1 75387 75608
YP_008051567.1 NC_021305_p88 Pnk phrog_505 polynucleotide kinase other 1 53347 54288
YP_008051617.1 NC_021305_p138 hypothetical protein phrog_2772 unknown function unknown function -1 73493 73729
YP_008051494.1 NC_021305_p15 hypothetical protein phrog_1531 head closure connector 1 9186 9521
YP_008051491.1 NC_021305_p12 major capsid protein phrog_10 major head protein head and packaging 1 6810 8303
YP_008051614.1 NC_021305_p135 hypothetical protein phrog_3174 unknown function unknown function -1 72565 72960
YP_008051563.1 NC_021305_p84 hypothetical protein phrog_2747 unknown function unknown function 1 52063 52284
YP_008051574.1 NC_021305_p95 hypothetical protein phrog_889 unknown function unknown function 1 57468 57920
YP_008051499.1 NC_021305_p20 tail assembly chaperone phrog_621 tail assembly chaperone tail 1 11935 12396
YP_008051490.1 NC_021305_p11 capsid maturation protease phrog_2753 head maturation protease head and packaging 1 5631 6722
YP_008051623.1 NC_021305_p144 hypothetical protein phrog_8080 unknown function unknown function -1 75061 75279
YP_008051595.1 NC_021305_p116 hypothetical protein phrog_3062 unknown function unknown function 1 67085 67339
YP_008051539.1 NC_021305_p60 pentapeptide repeat domain protein phrog_923 unknown function unknown function 1 40965 41810
YP_008051537.1 NC_021305_p58 hypothetical protein phrog_3071 unknown function unknown function 1 40736 40834
YP_008051531.1 NC_021305_p52 hypothetical protein phrog_2759 unknown function unknown function -1 36739 37134
YP_008051485.1 NC_021305_p6 hypothetical protein phrog_4101 unknown function unknown function -1 1590 1829
YP_008051538.1 NC_021305_p59 hypothetical protein phrog_2852 unknown function unknown function 1 40831 40968
YP_008051608.1 NC_021305_p129 hypothetical protein phrog_1915 unknown function unknown function -1 70519 70977
YP_008051621.1 NC_021305_p142 hypothetical protein phrog_5130 unknown function unknown function -1 74411 74602
YP_008051525.1 NC_021305_p46 hypothetical protein phrog_1155 unknown function unknown function -1 35668 35841
YP_008051618.1 NC_021305_p139 hypothetical protein phrog_7581 unknown function unknown function -1 73732 73935
YP_008051557.1 NC_021305_p78 hypothetical protein phrog_1673 unknown function unknown function 1 49179 49415
YP_008051565.1 NC_021305_p86 hypothetical protein phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 52639 53001
YP_008051613.1 NC_021305_p134 hypothetical protein phrog_2883 unknown function unknown function -1 72013 72561
YP_008051591.1 NC_021305_p112 RecA phrog_97 UvsX-like recombinase other 1 65643 66605
YP_008051521.1 NC_021305_p42 hypothetical protein phrog_3472 unknown function unknown function -1 34628 34882
YP_008051588.1 NC_021305_p109 hypothetical protein phrog_2252 endolysin; inhibits RNA polymerase lysis 1 64121 64600
YP_008051515.1 NC_021305_p36 lysin B phrog_102 endolysin lysis 1 31837 32694
YP_008051554.1 NC_021305_p75 hypothetical protein phrog_2793 unknown function unknown function 1 48232 48465
YP_008051569.1 NC_021305_p90 hypothetical protein phrog_2844 unknown function unknown function 1 54761 54859
YP_008051516.1 NC_021305_p37 hypothetical protein phrog_726 unknown function unknown function 1 32691 33107
YP_008051511.1 NC_021305_p32 hypothetical protein phrog_411 unknown function unknown function 1 29262 29546
YP_008051540.1 NC_021305_p61 hypothetical protein phrog_2463 unknown function unknown function 1 41812 41958
YP_008051509.1 NC_021305_p30 hypothetical protein phrog_644 unknown function unknown function 1 28529 28957
YP_008051495.1 NC_021305_p16 hypothetical protein phrog_2805 minor tail protein tail 1 9518 9898
YP_008051496.1 NC_021305_p17 hypothetical protein phrog_813 head-tail adaptor connector 1 9876 10280
YP_008051597.1 NC_021305_p118 hypothetical protein phrog_2764 unknown function unknown function 1 67746 67913
YP_008051489.1 NC_021305_p10 portal protein phrog_12 portal protein head and packaging 1 4072 5628
YP_008051586.1 NC_021305_p107 hypothetical protein phrog_1042 unknown function unknown function 1 63470 63733
YP_008051507.1 NC_021305_p28 D-ala-D-ala carboxypeptidase phrog_382 minor tail protein with lysin activity tail 1 24656 27496
YP_008051553.1 NC_021305_p74 hypothetical protein phrog_1622 unknown function unknown function 1 48056 48235
YP_008051561.1 NC_021305_p82 hypothetical protein phrog_1091 unknown function unknown function 1 51643 51831
YP_008051514.1 NC_021305_p35 hypothetical protein phrog_2424 unknown function unknown function 1 31502 31840
YP_008051606.1 NC_021305_p127 hypothetical protein phrog_8201 unknown function unknown function -1 70083 70157
YP_008051559.1 NC_021305_p80 hypothetical protein phrog_572 unknown function unknown function 1 50059 50391
YP_008051581.1 NC_021305_p102 hypothetical protein phrog_2785 unknown function unknown function 1 61489 61845
YP_008051487.1 NC_021305_p8 terminase large subunit phrog_9 terminase large subunit head and packaging 1 2182 3852
YP_008051587.1 NC_021305_p108 hypothetical protein phrog_355 nucleoside 2-deoxyribosyltransferase DNA, RNA and nucleotide metabolism 1 63744 64118
YP_008051599.1 NC_021305_p120 hypothetical protein phrog_2296 unknown function unknown function 1 68094 68231