Genomic map of Mycobacterium phage Phrux (NC_021309)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_021309
Definition
Mycobacterium phage Phrux, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Kostyavirus; unclassified Kostyavirus.
DB of origin
REFSEQ
Length
74711
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
141
%GC
63.05
Number of singletons
0
Number of paralogs
3

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_008051951.1 NC_021309_p15 hypothetical protein phrog_1531 head closure connector 1 9465 9800
YP_008052052.1 NC_021309_p116 hypothetical protein phrog_2823 unknown function unknown function 1 66917 67117
YP_008051979.1 NC_021309_p43 hypothetical protein phrog_1155 unknown function unknown function -1 34991 35164
YP_008052049.1 NC_021309_p113 hypothetical protein phrog_3062 unknown function unknown function 1 66105 66359
YP_008051957.1 NC_021309_p21 tail assembly chaperone phrog_15493 tail assembly chaperone tail 1 12618 13085
YP_008052076.1 NC_021309_p140 hypothetical protein phrog_2762 unknown function unknown function 1 73919 74140
YP_008052064.1 NC_021309_p128 hypothetical protein phrog_4547 unknown function unknown function -1 70341 70658
YP_008051983.1 NC_021309_p47 hypothetical protein phrog_2815 unknown function unknown function -1 35791 35937
YP_008051989.1 NC_021309_p53 immunity repressor phrog_2745 transcriptional repressor transcription regulation -1 39277 39708
YP_008052057.1 NC_021309_p121 hypothetical protein phrog_6448 unknown function unknown function 1 67705 67818
YP_008051985.1 NC_021309_p49 hypothetical protein phrog_2847 unknown function unknown function -1 36619 36942
YP_008052062.1 NC_021309_p126 hypothetical protein phrog_1915 unknown function unknown function -1 69537 69995
YP_008052026.1 NC_021309_p90 hypothetical protein phrog_1590 unknown function unknown function 1 55367 56188
YP_008052012.1 NC_021309_p76 hypothetical protein phrog_1882 unknown function unknown function 1 48610 49260
YP_008051981.1 NC_021309_p45 hypothetical protein phrog_2893 unknown function unknown function -1 35328 35564
YP_008052014.1 NC_021309_p78 DnaB-like helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 49582 50844
YP_008052035.1 NC_021309_p99 hypothetical protein phrog_2785 unknown function unknown function 1 60509 60865
YP_008052070.1 NC_021309_p134 hypothetical protein phrog_1438 unknown function unknown function -1 72341 72514
YP_008052020.1 NC_021309_p84 hypothetical protein phrog_2894 unknown function unknown function 1 52157 52351
YP_008052031.1 NC_021309_p95 hypothetical protein phrog_1568 DNA binding protein DNA, RNA and nucleotide metabolism 1 57421 57963
YP_008052041.1 NC_021309_p105 hypothetical protein phrog_355 nucleoside 2-deoxyribosyltransferase DNA, RNA and nucleotide metabolism 1 62764 63138
YP_008051993.1 NC_021309_p57 hypothetical protein phrog_2463 unknown function unknown function 1 41010 41156
YP_008051995.1 NC_021309_p59 hypothetical protein phrog_2744 unknown function unknown function 1 41975 42280
YP_008051955.1 NC_021309_p19 hypothetical protein phrog_5711 head fiber protein head and packaging 1 11620 12093
YP_008052073.1 NC_021309_p137 hypothetical protein phrog_8479 unknown function unknown function -1 72958 73158
YP_008052000.1 NC_021309_p64 hypothetical protein phrog_466 exonuclease DNA, RNA and nucleotide metabolism 1 43651 44619
YP_008052002.1 NC_021309_p66 Erf phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 45019 45741
YP_008052058.1 NC_021309_p122 hypothetical protein phrog_686 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 68082 68345
YP_008051965.1 NC_021309_p29 hypothetical protein phrog_644 unknown function unknown function 1 28291 28719
YP_008051971.1 NC_021309_p35 lysin B phrog_102 endolysin lysis 1 31599 32456
YP_008051964.1 NC_021309_p28 hypothetical protein phrog_553 minor tail protein tail 1 27259 28221
YP_008051937.1 NC_021309_p1 hypothetical protein phrog_2829 unknown function unknown function 1 267 560
YP_008052061.1 NC_021309_p125 hypothetical protein phrog_3034 unknown function unknown function -1 69172 69540
YP_008051945.1 NC_021309_p9 hypothetical protein phrog_2845 unknown function unknown function 1 3942 4163
YP_008052067.1 NC_021309_p131 hypothetical protein phrog_2883 unknown function unknown function -1 71031 71579
YP_008052045.1 NC_021309_p109 hypothetical protein phrog_97 UvsX-like recombinase other 1 64663 65625
YP_008051970.1 NC_021309_p34 hypothetical protein phrog_2424 unknown function unknown function 1 31264 31602
YP_008052011.1 NC_021309_p75 hypothetical protein phrog_1673 unknown function unknown function 1 48377 48613
YP_008052010.1 NC_021309_p74 HNH endonuclease domain protein phrog_740 HNH endonuclease DNA, RNA and nucleotide metabolism 1 48070 48387
YP_008051977.1 NC_021309_p41 hypothetical protein phrog_647 unknown function unknown function -1 34168 34632
YP_008051975.1 NC_021309_p39 Lsr2 phrog_1223 nucloid associated Lsr2-like DNA, RNA and nucleotide metabolism -1 33540 33926
YP_008051962.1 NC_021309_p26 minor tail protein phrog_346 minor tail protein tail 1 22025 24421
YP_008052036.1 NC_021309_p100 hypothetical protein phrog_2757 unknown function unknown function 1 60866 61156
YP_008052037.1 NC_021309_p101 hypothetical protein phrog_1969 unknown function unknown function 1 61161 61472
YP_008052072.1 NC_021309_p136 hypothetical protein phrog_2795 unknown function unknown function -1 72751 72954
YP_008052039.1 NC_021309_p103 hypothetical protein phrog_2846 unknown function unknown function 1 62197 62493
YP_008052016.1 NC_021309_p80 hypothetical protein phrog_1821 transcriptional regulator WhiB-like transcription regulation 1 51026 51286
YP_008052071.1 NC_021309_p135 hypothetical protein phrog_2772 unknown function unknown function -1 72518 72745
YP_008052077.1 NC_021309_p141 HNH endonuclease domain protein phrog_589 HNH endonuclease DNA, RNA and nucleotide metabolism 1 74130 74477
YP_008052019.1 NC_021309_p83 hypothetical protein phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 51798 52160
YP_008052025.1 NC_021309_p89 RNA ligase phrog_968 RNA ligase DNA, RNA and nucleotide metabolism 1 54005 55330
YP_008052042.1 NC_021309_p106 hypothetical protein phrog_2252 endolysin; inhibits RNA polymerase lysis 1 63141 63620
YP_008052018.1 NC_021309_p82 hypothetical protein phrog_9963 unknown function unknown function 1 51475 51801
YP_008051994.1 NC_021309_p58 hypothetical protein phrog_2800 unknown function unknown function 1 41153 41431
YP_008051998.1 NC_021309_p62 hypothetical protein phrog_16636 secreted protein other 1 42852 43328
YP_008051991.1 NC_021309_p55 hypothetical protein phrog_2852 unknown function unknown function 1 40029 40166
YP_008051982.1 NC_021309_p46 hypothetical protein phrog_2702 unknown function unknown function -1 35557 35772
YP_008051938.1 NC_021309_p2 hypothetical protein phrog_2775 unknown function unknown function 1 557 742
YP_008051968.1 NC_021309_p32 lysin A phrog_317 endolysin lysis 1 29382 30884
YP_008052033.1 NC_021309_p97 ssDNA binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 59176 59616
YP_008052017.1 NC_021309_p81 hypothetical protein phrog_2747 unknown function unknown function 1 51261 51482
YP_008052053.1 NC_021309_p117 hypothetical protein phrog_2296 unknown function unknown function 1 67114 67251
YP_008052006.1 NC_021309_p70 hypothetical protein phrog_572 unknown function unknown function 1 46880 47254
YP_008052021.1 NC_021309_p85 Pnk phrog_505 polynucleotide kinase other 1 52506 53447
YP_008051987.1 NC_021309_p51 hypothetical protein phrog_2842 unknown function unknown function 1 38192 38431
YP_008052009.1 NC_021309_p73 hypothetical protein phrog_289 GTP-binding domain other 1 47660 48073
YP_008051980.1 NC_021309_p44 hypothetical protein phrog_861 site-specific recombination directionality factor RDF integration and excision -1 35164 35331
YP_008051947.1 NC_021309_p11 capsid maturation protease phrog_2753 head maturation protease head and packaging 1 5709 7001
YP_008051942.1 NC_021309_p6 hypothetical protein phrog_4101 unknown function unknown function -1 1668 1907
YP_008051969.1 NC_021309_p33 holin phrog_526 holin lysis 1 30888 31271
YP_008051996.1 NC_021309_p60 hypothetical protein phrog_2147 unknown function unknown function 1 42414 42713
YP_008052069.1 NC_021309_p133 hypothetical protein phrog_4496 unknown function unknown function -1 71983 72336
YP_008051943.1 NC_021309_p7 hypothetical protein phrog_2202 unknown function unknown function -1 1907 2215
YP_008052004.1 NC_021309_p68 hypothetical protein phrog_2771 unknown function unknown function 1 46045 46515
YP_008052023.1 NC_021309_p87 hypothetical protein phrog_2844 unknown function unknown function 1 53641 53739
YP_008052003.1 NC_021309_p67 hypothetical protein phrog_2750 unknown function unknown function 1 45734 46045
YP_008052034.1 NC_021309_p98 clp protease phrog_94 head maturation protease head and packaging 1 59706 60512
YP_008051940.1 NC_021309_p4 hypothetical protein phrog_8426 unknown function unknown function 1 993 1142
YP_008051973.1 NC_021309_p37 NrdH-like protein phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 32876 33121
YP_008052013.1 NC_021309_p77 hypothetical protein phrog_572 unknown function unknown function 1 49257 49589
YP_008052051.1 NC_021309_p115 hypothetical protein phrog_2764 unknown function unknown function 1 66766 66933
YP_008052022.1 NC_021309_p86 hypothetical protein phrog_7164 unknown function unknown function 1 53447 53644
YP_008051939.1 NC_021309_p3 hypothetical protein phrog_3858 unknown function unknown function 1 739 996
YP_008052015.1 NC_021309_p79 hypothetical protein phrog_1091 unknown function unknown function 1 50841 51029
YP_008051953.1 NC_021309_p17 hypothetical protein phrog_813 head-tail adaptor connector 1 10155 10559
YP_008052043.1 NC_021309_p107 DnaQ-like exonuclease phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 63631 64416
YP_008052068.1 NC_021309_p132 hypothetical protein phrog_3174 unknown function unknown function -1 71583 71978
YP_008052056.1 NC_021309_p120 hypothetical protein phrog_3016 unknown function unknown function 1 67542 67703
YP_008051946.1 NC_021309_p10 portal protein phrog_12 portal protein head and packaging 1 4150 5706
YP_008051948.1 NC_021309_p12 major capsid protein phrog_10 major head protein head and packaging 1 7089 8582
YP_008052054.1 NC_021309_p118 hypothetical protein phrog_2925 unknown function unknown function 1 67248 67427
YP_008051944.1 NC_021309_p8 terminase large subunit phrog_9 terminase large subunit head and packaging 1 2260 3930
YP_008052027.1 NC_021309_p91 WhiB phrog_472 WhiB transcriptional factor transcription regulation 1 56185 56445
YP_008051950.1 NC_021309_p14 hypothetical protein phrog_442 head-tail adaptor connector 1 8884 9450
YP_008052063.1 NC_021309_p127 hypothetical protein phrog_1587 unknown function unknown function -1 70010 70339
YP_008051952.1 NC_021309_p16 hypothetical protein phrog_2805 minor tail protein tail 1 9797 10177
YP_008052050.1 NC_021309_p114 hypothetical protein phrog_2174 unknown function unknown function 1 66356 66769
YP_008052075.1 NC_021309_p139 hypothetical protein phrog_8080 unknown function unknown function -1 73593 73811
YP_008052074.1 NC_021309_p138 hypothetical protein phrog_2904 unknown function unknown function 1 73187 73546
YP_008051949.1 NC_021309_p13 hypothetical protein phrog_2796 head-tail connector protein connector 1 8705 8884
YP_008052007.1 NC_021309_p71 hypothetical protein phrog_1622 unknown function unknown function 1 47254 47433
YP_008051954.1 NC_021309_p18 major tail subunit phrog_476 major tail protein tail 1 10586 11560
YP_008052029.1 NC_021309_p93 hypothetical protein phrog_889 unknown function unknown function 1 56617 57087
YP_008052028.1 NC_021309_p92 hypothetical protein phrog_2853 unknown function unknown function 1 56462 56620
YP_008051988.1 NC_021309_p52 hypothetical protein phrog_950 unknown function unknown function -1 38409 39182
YP_008051974.1 NC_021309_p38 hypothetical protein phrog_9947 Lsr2-like DNA bridging protein DNA, RNA and nucleotide metabolism -1 33358 33537
YP_008052066.1 NC_021309_p130 hypothetical protein phrog_2287 unknown function unknown function -1 70779 71015
YP_008052030.1 NC_021309_p94 hypothetical protein phrog_2788 unknown function unknown function 1 57089 57424
YP_008052065.1 NC_021309_p129 hypothetical protein phrog_3730 unknown function unknown function -1 70664 70789
YP_008051976.1 NC_021309_p40 hypothetical protein phrog_3481 unknown function unknown function -1 33974 34171
YP_008052047.1 NC_021309_p111 hypothetical protein phrog_2755 unknown function unknown function 1 65746 65919
YP_008051941.1 NC_021309_p5 terminase small subunit phrog_83 terminase small subunit head and packaging 1 1135 1596
YP_008051958.1 NC_021309_p22 tapemeasure phrog_2723 tail length tape measure protein tail 1 13078 17808
YP_008051978.1 NC_021309_p42 hypothetical protein phrog_722 unknown function unknown function -1 34629 34994
YP_008051990.1 NC_021309_p54 hypothetical protein phrog_3071 unknown function unknown function 1 39934 40032
YP_008051959.1 NC_021309_p23 minor tail protein phrog_106 minor tail protein tail 1 17838 19499
YP_008052005.1 NC_021309_p69 hypothetical protein phrog_1389 unknown function unknown function 1 46515 46883
YP_008051956.1 NC_021309_p20 tail assembly chaperone phrog_621 tail assembly chaperone tail 1 12142 12675
YP_008052044.1 NC_021309_p108 RecA phrog_1941 unknown function unknown function 1 64413 64655
YP_008051961.1 NC_021309_p25 minor tail protein phrog_732 minor tail protein tail 1 21175 22008
YP_008051967.1 NC_021309_p31 hypothetical protein phrog_411 unknown function unknown function 1 29024 29308
YP_008052055.1 NC_021309_p119 hypothetical protein phrog_2897 unknown function unknown function 1 67427 67558
YP_008051999.1 NC_021309_p63 hypothetical protein phrog_762 unknown function unknown function 1 43325 43654
YP_008051960.1 NC_021309_p24 minor tail protein phrog_110 minor tail protein tail 1 19487 21166
YP_008052060.1 NC_021309_p124 hypothetical protein phrog_2942 unknown function unknown function -1 68850 69104
YP_008051963.1 NC_021309_p27 D-ala-D-ala carboxypeptidase phrog_382 minor tail protein with lysin activity tail 1 24418 27258
YP_008052008.1 NC_021309_p72 hypothetical protein phrog_2793 unknown function unknown function 1 47430 47663
YP_008052001.1 NC_021309_p65 hypothetical protein phrog_572 unknown function unknown function 1 44616 45026
YP_008052046.1 NC_021309_p110 hypothetical protein phrog_2965 unknown function unknown function 1 65622 65759
YP_008051972.1 NC_021309_p36 hypothetical protein phrog_726 unknown function unknown function 1 32453 32869
YP_008051997.1 NC_021309_p61 hypothetical protein phrog_2221 unknown function unknown function 1 42646 42807
YP_008051966.1 NC_021309_p30 hypothetical protein phrog_686 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 28706 28891
YP_008052040.1 NC_021309_p104 hypothetical protein phrog_1042 unknown function unknown function 1 62490 62753
YP_008051992.1 NC_021309_p56 pentapeptide repeat family protein phrog_923 unknown function unknown function 1 40163 41008
YP_008052059.1 NC_021309_p123 hypothetical protein phrog_2579 ParB C-terminal domain DNA, RNA and nucleotide metabolism -1 68342 68731
YP_008051984.1 NC_021309_p48 hypothetical protein phrog_2759 unknown function unknown function -1 35937 36332
YP_008052032.1 NC_021309_p96 DNA methylase phrog_67 DNA methyltransferase other 1 57960 59183
YP_008051986.1 NC_021309_p50 integrase (y-int) phrog_1 integrase integration and excision 1 37172 38053
YP_008052038.1 NC_021309_p102 hypothetical protein phrog_959 HNH endonuclease DNA, RNA and nucleotide metabolism 1 61525 61815
YP_008052048.1 NC_021309_p112 hypothetical protein phrog_2279 unknown function unknown function 1 65912 66124
YP_008052024.1 NC_021309_p88 hypothetical protein phrog_10857 unknown function unknown function 1 53736 54008