Genomic map of Mycobacterium phage Phaux (NC_021311)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_021311
Definition
Mycobacterium phage Phaux, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Kostyavirus; unclassified Kostyavirus.
DB of origin
REFSEQ
Length
76479
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
145
%GC
62.91
Number of singletons
0
Number of paralogs
4

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_008052255.1 NC_021311_p81 hypothetical protein phrog_1882 unknown function unknown function 1 50014 50664
YP_008052232.1 NC_021311_p58 hypothetical protein phrog_3071 unknown function unknown function 1 41341 41436
YP_008052285.1 NC_021311_p111 hypothetical protein phrog_355 nucleoside 2-deoxyribosyltransferase DNA, RNA and nucleotide metabolism 1 64686 65060
YP_008052289.1 NC_021311_p115 RecA phrog_97 UvsX-like recombinase other 1 66585 67547
YP_008052178.1 NC_021311_p4 terminase small subunit phrog_83 terminase small subunit head and packaging 1 776 1237
YP_008052249.1 NC_021311_p75 hypothetical protein phrog_572 unknown function unknown function 1 48284 48658
YP_008052276.1 NC_021311_p102 ssDNA binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 60900 61340
YP_008052242.1 NC_021311_p68 hypothetical protein phrog_762 unknown function unknown function 1 44732 45058
YP_008052186.1 NC_021311_p12 hypothetical protein phrog_2796 head-tail connector protein connector 1 8995 9186
YP_008052263.1 NC_021311_p89 hypothetical protein phrog_2894 unknown function unknown function 1 53603 53797
YP_008052223.1 NC_021311_p49 hypothetical protein phrog_2893 unknown function unknown function -1 36735 36971
YP_008052305.1 NC_021311_p131 hypothetical protein phrog_3034 unknown function unknown function -1 71094 71462
YP_008052264.1 NC_021311_p90 Pnk phrog_505 polynucleotide kinase other 1 53952 54893
YP_008052252.1 NC_021311_p78 hypothetical protein phrog_289 GTP-binding domain other 1 49064 49477
YP_008052293.1 NC_021311_p119 hypothetical protein phrog_3062 unknown function unknown function 1 68027 68281
YP_008052193.1 NC_021311_p19 tail assembly chaperone phrog_5940 tail assembly chaperone tail 1 12570 12851
YP_008052275.1 NC_021311_p101 DNA methylase phrog_67 DNA methyltransferase other 1 59684 60907
YP_008052284.1 NC_021311_p110 hypothetical protein phrog_1042 unknown function unknown function 1 64412 64675
YP_008052209.1 NC_021311_p35 hypothetical protein phrog_726 unknown function unknown function 1 32738 33154
YP_008052288.1 NC_021311_p114 hypothetical protein phrog_1941 unknown function unknown function 1 66335 66577
YP_008052229.1 NC_021311_p55 hypothetical protein phrog_2842 unknown function unknown function 1 39599 39838
YP_008052230.1 NC_021311_p56 hypothetical protein phrog_950 unknown function unknown function -1 39816 40589
YP_008052317.1 NC_021311_p143 hypothetical protein phrog_8080 unknown function unknown function -1 75367 75579
YP_008052205.1 NC_021311_p31 lysin A phrog_317 endolysin lysis 1 29667 31169
YP_008052218.1 NC_021311_p44 hypothetical protein phrog_1573 DNA methyltransferase other -1 35589 36023
YP_008052234.1 NC_021311_p60 pentapeptide repeat family protein phrog_923 unknown function unknown function 1 41570 42415
YP_008052183.1 NC_021311_p9 capsid maturation protease phrog_12 portal protein head and packaging 1 4787 6343
YP_008052254.1 NC_021311_p80 hypothetical protein phrog_1673 unknown function unknown function 1 49781 50017
YP_008052213.1 NC_021311_p39 hypothetical protein phrog_647 unknown function unknown function -1 34214 34678
YP_008052307.1 NC_021311_p133 hypothetical protein phrog_1587 unknown function unknown function -1 71931 72260
YP_008052181.1 NC_021311_p7 terminase large subunit phrog_9 terminase large subunit head and packaging 1 1904 4567
YP_008052237.1 NC_021311_p63 hypothetical protein phrog_2744 unknown function unknown function 1 43382 43687
YP_008052235.1 NC_021311_p61 hypothetical protein phrog_2463 unknown function unknown function 1 42417 42563
YP_008052200.1 NC_021311_p26 D-ala-D-ala carboxypeptidase phrog_382 minor tail protein with lysin activity tail 1 24703 27543
YP_008052198.1 NC_021311_p24 minor tail protein phrog_732 minor tail protein tail 1 21460 22293
YP_008052283.1 NC_021311_p109 hypothetical protein phrog_2846 unknown function unknown function 1 64119 64415
YP_008052261.1 NC_021311_p87 hypothetical protein phrog_3836 unknown function unknown function 1 52882 53247
YP_008052240.1 NC_021311_p66 hypothetical protein phrog_2221 unknown function unknown function 1 44053 44214
YP_008052303.1 NC_021311_p129 hypothetical protein phrog_2942 unknown function unknown function -1 70772 71026
YP_008052202.1 NC_021311_p28 hypothetical protein phrog_644 unknown function unknown function 1 28576 29004
YP_008052177.1 NC_021311_p3 hypothetical protein phrog_2775 unknown function unknown function 1 601 783
YP_008052201.1 NC_021311_p27 hypothetical protein phrog_553 minor tail protein tail 1 27544 28506
YP_008052271.1 NC_021311_p97 hypothetical protein phrog_2853 unknown function unknown function 1 58186 58344
YP_008052238.1 NC_021311_p64 hypothetical protein phrog_3463 unknown function unknown function 1 43706 43813
YP_008052300.1 NC_021311_p126 hypothetical protein phrog_3016 unknown function unknown function 1 69464 69625
YP_008052215.1 NC_021311_p41 hypothetical protein phrog_5831 unknown function unknown function -1 34926 35108
YP_008052296.1 NC_021311_p122 hypothetical protein phrog_2823 unknown function unknown function 1 68839 69039
YP_008052304.1 NC_021311_p130 hypothetical protein phrog_8201 unknown function unknown function -1 71023 71097
YP_008052189.1 NC_021311_p15 hypothetical protein phrog_2805 minor tail protein tail 1 10097 10477
YP_008052262.1 NC_021311_p88 hypothetical protein phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 53244 53606
YP_008052226.1 NC_021311_p52 hypothetical protein phrog_2759 unknown function unknown function -1 37344 37739
YP_008052313.1 NC_021311_p139 hypothetical protein phrog_1438 unknown function unknown function -1 74134 74307
YP_008052318.1 NC_021311_p144 hypothetical protein phrog_2762 unknown function unknown function 1 75687 75908
YP_008052315.1 NC_021311_p141 hypothetical protein phrog_2795 unknown function unknown function -1 74546 74743
YP_008052299.1 NC_021311_p125 hypothetical protein phrog_2897 unknown function unknown function 1 69349 69480
YP_008052269.1 NC_021311_p95 hypothetical protein phrog_1590 unknown function unknown function 1 57091 57912
YP_008052228.1 NC_021311_p54 integrase, (Y-int) phrog_1 integrase integration and excision 1 38579 39460
YP_008052190.1 NC_021311_p16 hypothetical protein phrog_813 head-tail adaptor connector 1 10455 10859
YP_008052204.1 NC_021311_p30 hypothetical protein phrog_411 unknown function unknown function 1 29309 29593
YP_008052292.1 NC_021311_p118 hypothetical protein phrog_2279 unknown function unknown function 1 67834 68046
YP_008052256.1 NC_021311_p82 hypothetical protein phrog_572 unknown function unknown function 1 50661 50996
YP_008052225.1 NC_021311_p51 hypothetical protein phrog_2815 unknown function unknown function -1 37198 37344
YP_008052279.1 NC_021311_p105 hypothetical protein phrog_2785 unknown function unknown function 1 62431 62787
YP_008052210.1 NC_021311_p36 NrdH-like protein phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 33161 33406
YP_008052231.1 NC_021311_p57 immunity repressor phrog_2745 transcriptional repressor transcription regulation -1 40684 41124
YP_008052274.1 NC_021311_p100 hypothetical protein phrog_1568 DNA binding protein DNA, RNA and nucleotide metabolism 1 59145 59687
YP_008052191.1 NC_021311_p17 major tail subunit phrog_476 major tail protein tail 1 10886 11857
YP_008052248.1 NC_021311_p74 hypothetical protein phrog_1389 unknown function unknown function 1 47919 48287
YP_008052259.1 NC_021311_p85 hypothetical protein phrog_1821 transcriptional regulator WhiB-like transcription regulation 1 52418 52693
YP_008052258.1 NC_021311_p84 hypothetical protein phrog_1091 unknown function unknown function 1 52248 52436
YP_008052220.1 NC_021311_p46 hypothetical protein phrog_6127 unknown function unknown function -1 36288 36401
YP_008052301.1 NC_021311_p127 hypothetical protein phrog_686 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 70004 70267
YP_008052243.1 NC_021311_p69 hypothetical protein phrog_466 exonuclease DNA, RNA and nucleotide metabolism 1 45055 46023
YP_008052253.1 NC_021311_p79 HNH endonuclease domain protein phrog_740 HNH endonuclease DNA, RNA and nucleotide metabolism 1 49474 49791
YP_008052291.1 NC_021311_p117 hypothetical protein phrog_2755 unknown function unknown function 1 67668 67841
YP_008052196.1 NC_021311_p22 minor tail protein phrog_106 minor tail protein tail 1 18123 19784
YP_008052270.1 NC_021311_p96 WhiB phrog_472 WhiB transcriptional factor transcription regulation 1 57909 58169
YP_008052175.1 NC_021311_p1 hypothetical protein phrog_4110 unknown function unknown function 1 267 449
YP_008052295.1 NC_021311_p121 hypothetical protein phrog_2764 unknown function unknown function 1 68688 68855
YP_008052251.1 NC_021311_p77 hypothetical protein phrog_2793 unknown function unknown function 1 48834 49067
YP_008052216.1 NC_021311_p42 hypothetical protein phrog_3447 unknown function unknown function -1 35105 35317
YP_008052221.1 NC_021311_p47 hypothetical protein phrog_1155 unknown function unknown function -1 36398 36571
YP_008052247.1 NC_021311_p73 hypothetical protein phrog_2771 unknown function unknown function 1 47449 47919
YP_008052298.1 NC_021311_p124 hypothetical protein phrog_2925 unknown function unknown function 1 69170 69349
YP_008052265.1 NC_021311_p91 hypothetical protein phrog_2495 unknown function unknown function 1 55000 55368
YP_008052290.1 NC_021311_p116 hypothetical protein phrog_2965 unknown function unknown function 1 67544 67681
YP_008052316.1 NC_021311_p142 hypothetical protein phrog_2904 unknown function unknown function 1 74976 75323
YP_008052236.1 NC_021311_p62 hypothetical protein phrog_2800 unknown function unknown function 1 42560 42838
YP_008052310.1 NC_021311_p136 hypothetical protein phrog_2287 unknown function unknown function -1 72930 73166
YP_008052188.1 NC_021311_p14 hypothetical protein phrog_1531 head closure connector 1 9765 10100
YP_008052208.1 NC_021311_p34 lysin B phrog_102 endolysin lysis 1 31884 32741
YP_008052297.1 NC_021311_p123 hypothetical protein phrog_2296 unknown function unknown function 1 69036 69173
YP_008052244.1 NC_021311_p70 hypothetical protein phrog_572 unknown function unknown function 1 46020 46430
YP_008052309.1 NC_021311_p135 hypothetical protein phrog_3730 unknown function unknown function -1 72815 72988
YP_008052219.1 NC_021311_p45 hypothetical protein phrog_722 unknown function unknown function -1 36020 36295
YP_008052260.1 NC_021311_p86 hypothetical protein phrog_2747 unknown function unknown function 1 52668 52889
YP_008052214.1 NC_021311_p40 hypothetical protein phrog_3472 unknown function unknown function -1 34675 34929
YP_008052182.1 NC_021311_p8 portal protein phrog_2845 unknown function unknown function 1 4579 4800
YP_008052281.1 NC_021311_p107 hypothetical protein phrog_1969 unknown function unknown function 1 63083 63394
YP_008052180.1 NC_021311_p6 hypothetical protein phrog_2202 unknown function unknown function -1 1551 1859
YP_008052217.1 NC_021311_p43 hypothetical protein phrog_722 unknown function unknown function -1 35314 35592
YP_008052227.1 NC_021311_p53 hypothetical protein phrog_2847 unknown function unknown function -1 38026 38328
YP_008052311.1 NC_021311_p137 hypothetical protein phrog_2883 unknown function unknown function -1 73182 73730
YP_008052319.1 NC_021311_p145 HNH endonuclease domain protein phrog_589 HNH endonuclease DNA, RNA and nucleotide metabolism 1 75898 76245
YP_008052306.1 NC_021311_p132 hypothetical protein phrog_1915 unknown function unknown function -1 71459 71917
YP_008052273.1 NC_021311_p99 hypothetical protein phrog_2788 unknown function unknown function 1 58813 59148
YP_008052185.1 NC_021311_p11 hypothetical protein phrog_10 major head protein head and packaging 1 7435 8928
YP_008052268.1 NC_021311_p94 RNA ligase phrog_968 RNA ligase DNA, RNA and nucleotide metabolism 1 55729 57054
YP_008052195.1 NC_021311_p21 tapemeasure phrog_2723 tail length tape measure protein tail 1 13357 18093
YP_008052207.1 NC_021311_p33 hypothetical protein phrog_2424 unknown function unknown function 1 31549 31887
YP_008052222.1 NC_021311_p48 hypothetical protein phrog_861 site-specific recombination directionality factor RDF integration and excision -1 36571 36738
YP_008052203.1 NC_021311_p29 hypothetical protein phrog_686 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 28991 29176
YP_008052187.1 NC_021311_p13 hypothetical protein phrog_442 head-tail adaptor connector 1 9186 9752
YP_008052308.1 NC_021311_p134 hypothetical protein phrog_4006 unknown function unknown function -1 72265 72789
YP_008052241.1 NC_021311_p67 hypothetical protein phrog_301 secreted protein other 1 44403 44735
YP_008052272.1 NC_021311_p98 hypothetical protein phrog_889 unknown function unknown function 1 58341 58811
YP_008052314.1 NC_021311_p140 hypothetical protein phrog_2772 unknown function unknown function -1 74304 74540
YP_008052211.1 NC_021311_p37 Lsr2 phrog_1223 nucloid associated Lsr2-like DNA, RNA and nucleotide metabolism -1 33586 33972
YP_008052245.1 NC_021311_p71 Erf protein phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 46423 47145
YP_008052294.1 NC_021311_p120 hypothetical protein phrog_2174 unknown function unknown function 1 68230 68691
YP_008052257.1 NC_021311_p83 DnaB-like helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 50989 52251
YP_008052312.1 NC_021311_p138 hypothetical protein phrog_3174 unknown function unknown function -1 73734 74129
YP_008052184.1 NC_021311_p10 major capsid protein phrog_2753 head maturation protease head and packaging 1 6346 7347
YP_008052250.1 NC_021311_p76 hypothetical protein phrog_1622 unknown function unknown function 1 48658 48837
YP_008052282.1 NC_021311_p108 hypothetical protein phrog_959 HNH endonuclease DNA, RNA and nucleotide metabolism 1 63447 63737
YP_008052212.1 NC_021311_p38 hypothetical protein phrog_3481 unknown function unknown function -1 34020 34217
YP_008052280.1 NC_021311_p106 hypothetical protein phrog_2757 unknown function unknown function 1 62788 63078
YP_008052277.1 NC_021311_p103 Clp protease phrog_94 head maturation protease head and packaging 1 61375 62235
YP_008052302.1 NC_021311_p128 hypothetical protein phrog_2579 ParB C-terminal domain DNA, RNA and nucleotide metabolism -1 70264 70653
YP_008052197.1 NC_021311_p23 minor tail protein phrog_110 minor tail protein tail 1 19772 21451
YP_008052246.1 NC_021311_p72 hypothetical protein phrog_2750 unknown function unknown function 1 47138 47449
YP_008052233.1 NC_021311_p59 hypothetical protein phrog_2852 unknown function unknown function 1 41436 41573
YP_008052199.1 NC_021311_p25 minor tail protein phrog_346 minor tail protein tail 1 22310 24706
YP_008052194.1 NC_021311_p20 HNH endonuclease domain protein phrog_307 endonuclease VII DNA, RNA and nucleotide metabolism 1 12841 13356
YP_008052192.1 NC_021311_p18 tail assembly chaperone phrog_621 tail assembly chaperone tail 1 11977 12438
YP_008052179.1 NC_021311_p5 hypothetical protein phrog_4101 unknown function unknown function -1 1309 1551
YP_008052267.1 NC_021311_p93 hypothetical protein phrog_10857 unknown function unknown function 1 55460 55732
YP_008052206.1 NC_021311_p32 holin phrog_526 holin lysis 1 31173 31556
YP_008052278.1 NC_021311_p104 hypothetical protein phrog_1454 unknown function unknown function 1 62237 62434
YP_008052239.1 NC_021311_p65 hypothetical protein phrog_2147 unknown function unknown function 1 43821 44120
YP_008052286.1 NC_021311_p112 hypothetical protein phrog_2252 endolysin; inhibits RNA polymerase lysis 1 65063 65542
YP_008052266.1 NC_021311_p92 hypothetical protein phrog_2844 unknown function unknown function 1 55341 55463
YP_008052287.1 NC_021311_p113 DnaQ-like exonuclease phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 65553 66338
YP_008052224.1 NC_021311_p50 hypothetical protein phrog_2702 unknown function unknown function -1 36964 37179
YP_008052176.1 NC_021311_p2 hypothetical protein phrog_2829 unknown function unknown function 1 446 604