| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_021316 |
Definition |
Acinetobacter phage Abp1, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Beijerinckvirinae; Friunavirus. |
DB of origin |
REFSEQ |
Length |
42185 |
Host Name |
Acinetobacter baumannii |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
54 |
%GC |
39.15 |
Number of singletons |
1 |
Number of paralogs |
4 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_008058242.1 | NC_021316_p50 | EF hand domain protein | phrog_181 | endolysin | lysis | 1 | 38571 | 39128 |
| YP_008058239.1 | NC_021316_p47 | hypothetical protein | phrog_3918 | tail fiber protein | tail | 1 | 35580 | 37913 |
| YP_008058245.1 | NC_021316_p53 | hypothetical protein | phrog_8403 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 41440 | 41574 |
| YP_008058203.1 | NC_021316_p11 | hypothetical protein | phrog_7359 | unknown function | unknown function | 1 | 5139 | 5576 |
| YP_008058225.1 | NC_021316_p33 | hypothetical protein | phrog_139 | deoxynucleoside monophosphate kinase | other | 1 | 18241 | 18891 |
| YP_008058244.1 | NC_021316_p52 | DNA maturase B | phrog_38 | terminase large subunit | head and packaging | 1 | 39506 | 41443 |
| YP_008058202.1 | NC_021316_p10 | hypothetical protein | phrog_6421 | unknown function | unknown function | 1 | 4651 | 5139 |
| YP_008058231.1 | NC_021316_p39 | phage capsid and scaffold protein | phrog_267 | major head protein | head and packaging | 1 | 24318 | 25349 |
| YP_008058204.1 | NC_021316_p12 | hypothetical protein | phrog_7079 | unknown function | unknown function | 1 | 5587 | 5754 |
| YP_008058238.1 | NC_021316_p46 | internal virion protein | phrog_342 | internal virion protein with endolysin domain | head and packaging | 1 | 32475 | 35573 |
| YP_008058193.1 | NC_021316_p1 | hypothetical protein | phrog_10124 | unknown function | unknown function | 1 | 874 | 1080 |
| YP_008058243.1 | NC_021316_p51 | hypothetical protein | phrog_891 | terminase small subunit | head and packaging | 1 | 39188 | 39496 |
| YP_008058232.1 | NC_021316_p40 | hypothetical protein | phrog_6633 | tail protein | tail | 1 | 25405 | 25590 |
| YP_008058237.1 | NC_021316_p45 | hypothetical protein | phrog_2083 | internal virion lysozyme motif | head and packaging | 1 | 29580 | 32465 |
| YP_008058206.1 | NC_021316_p14 | hypothetical protein | phrog_2827 | unknown function | unknown function | 1 | 5929 | 6147 |
| YP_008058201.1 | NC_021316_p9 | hypothetical protein | phrog_6769 | unknown function | unknown function | 1 | 4182 | 4580 |
| YP_008058216.1 | NC_021316_p24 | HNH family endonuclease | phrog_99 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 11996 | 12433 |
| YP_008058236.1 | NC_021316_p44 | hypothetical protein | phrog_6056 | internal virion protein | head and packaging | 1 | 28896 | 29567 |
| YP_008058205.1 | NC_021316_p13 | hypothetical protein | phrog_7955 | unknown function | unknown function | 1 | 5741 | 5932 |
| YP_008058194.1 | NC_021316_p2 | hypothetical protein | phrog_35847 | unknown function | unknown function | 1 | 1510 | 1791 |
| YP_008058228.1 | NC_021316_p36 | hypothetical protein | phrog_4893 | unknown function | unknown function | 1 | 21617 | 21868 |
| YP_008058220.1 | NC_021316_p28 | hypothetical protein | phrog_10210 | unknown function | unknown function | 1 | 15339 | 15458 |
| YP_008058199.1 | NC_021316_p7 | hypothetical protein | phrog_38792 | unknown function | unknown function | 1 | 3738 | 3926 |
| YP_008058214.1 | NC_021316_p22 | hypothetical protein | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 10709 | 11155 |
| YP_008058208.1 | NC_021316_p16 | hypothetical protein | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 6368 | 6817 |
| YP_008058221.1 | NC_021316_p29 | DNA exonuclease | phrog_107 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 15491 | 16447 |
| YP_008058215.1 | NC_021316_p23 | DNA polymerase I | phrog_9556 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 11152 | 12012 |
| YP_008058246.1 | NC_021316_p54 | hypothetical protein | phrog_6687 | unknown function | unknown function | 1 | 41534 | 41737 |
| YP_008058233.1 | NC_021316_p41 | hypothetical protein | phrog_7599 | unknown function | unknown function | 1 | 25602 | 25895 |
| YP_008058222.1 | NC_021316_p30 | phage-associated homing endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 16428 | 16865 |
| YP_008058219.1 | NC_021316_p27 | hypothetical protein | phrog_862 | unknown function | unknown function | 1 | 14392 | 15282 |
| YP_008058197.1 | NC_021316_p5 | hypothetical protein | phrog_4445 | unknown function | unknown function | 1 | 2846 | 3079 |
| YP_008058218.1 | NC_021316_p26 | HNH family endonuclease | phrog_99 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 13895 | 14374 |
| YP_008058211.1 | NC_021316_p19 | hypothetical protein | phrog_7038 | unknown function | unknown function | 1 | 7919 | 8155 |
| YP_008058200.1 | NC_021316_p8 | hypothetical protein | phrog_9054 | unknown function | unknown function | 1 | 3907 | 4023 |
| YP_008058224.1 | NC_021316_p32 | hypothetical protein | phrog_221 | metallo-phosphoesterase | other | 1 | 17306 | 18241 |
| YP_008058212.1 | NC_021316_p20 | DNA helicase | phrog_19 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | 1 | 8168 | 9466 |
| YP_008058217.1 | NC_021316_p25 | DNA polymerase I | phrog_2573 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 12426 | 13886 |
| YP_008058223.1 | NC_021316_p31 | DNA endonuclease VII | phrog_423 | endonuclease VII | DNA, RNA and nucleotide metabolism | 1 | 16862 | 17302 |
| YP_008058241.1 | NC_021316_p49 | hypothetical protein | phrog_126 | holin/anti-holin | lysis | 1 | 38249 | 38584 |
| YP_008058234.1 | NC_021316_p42 | tail tubular protein A | phrog_446 | tail protein | tail | 1 | 26036 | 26596 |
| YP_008058209.1 | NC_021316_p17 | hypothetical protein | phrog_47 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 6847 | 7602 |
| YP_008058213.1 | NC_021316_p21 | hypothetical protein | phrog_114 | ATP-dependent DNA ligase | DNA, RNA and nucleotide metabolism | 1 | 9469 | 10449 |
| YP_008058196.1 | NC_021316_p4 | hypothetical protein | phrog_6323 | unknown function | unknown function | 1 | 2374 | 2748 |
| YP_008058240.1 | NC_021316_p48 | hypothetical protein | singleton | unknown function | unknown function | 1 | 38028 | 38201 |
| YP_008058195.1 | NC_021316_p3 | hypothetical protein | phrog_1448 | unknown function | unknown function | 1 | 1863 | 2372 |
| YP_008058207.1 | NC_021316_p15 | hypothetical protein | phrog_2827 | unknown function | unknown function | 1 | 6137 | 6346 |
| YP_008058227.1 | NC_021316_p35 | hypothetical protein | phrog_5394 | unknown function | unknown function | 1 | 21423 | 21620 |
| YP_008058198.1 | NC_021316_p6 | hypothetical protein | phrog_7131 | unknown function | unknown function | 1 | 3154 | 3750 |
| YP_008058226.1 | NC_021316_p34 | phage-associated RNA polymerase | phrog_414 | RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 18900 | 21317 |
| YP_008058235.1 | NC_021316_p43 | tail tube | phrog_457 | tail protein | tail | 1 | 26605 | 28896 |
| YP_008058210.1 | NC_021316_p18 | hypothetical protein | phrog_7630 | unknown function | unknown function | 1 | 7602 | 7919 |
| YP_008058229.1 | NC_021316_p37 | head-to-tail joining protein | phrog_449 | head-tail adaptor | connector | 1 | 21877 | 23433 |
| YP_008058230.1 | NC_021316_p38 | hypothetical protein | phrog_1018 | head scaffolding protein | head and packaging | 1 | 23442 | 24302 |