Genomic map of Acinetobacter phage Abp1 (NC_021316)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_021316
Definition
Acinetobacter phage Abp1, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Beijerinckvirinae; Friunavirus.
DB of origin
REFSEQ
Length
42185
Host Name
Acinetobacter baumannii
Host domain
Bacteria
Is prophage?
undef
Number of proteins
54
%GC
39.15
Number of singletons
1
Number of paralogs
4

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_008058242.1 NC_021316_p50 EF hand domain protein phrog_181 endolysin lysis 1 38571 39128
YP_008058239.1 NC_021316_p47 hypothetical protein phrog_3918 tail fiber protein tail 1 35580 37913
YP_008058245.1 NC_021316_p53 hypothetical protein phrog_8403 DNA binding protein DNA, RNA and nucleotide metabolism 1 41440 41574
YP_008058203.1 NC_021316_p11 hypothetical protein phrog_7359 unknown function unknown function 1 5139 5576
YP_008058225.1 NC_021316_p33 hypothetical protein phrog_139 deoxynucleoside monophosphate kinase other 1 18241 18891
YP_008058244.1 NC_021316_p52 DNA maturase B phrog_38 terminase large subunit head and packaging 1 39506 41443
YP_008058202.1 NC_021316_p10 hypothetical protein phrog_6421 unknown function unknown function 1 4651 5139
YP_008058231.1 NC_021316_p39 phage capsid and scaffold protein phrog_267 major head protein head and packaging 1 24318 25349
YP_008058204.1 NC_021316_p12 hypothetical protein phrog_7079 unknown function unknown function 1 5587 5754
YP_008058238.1 NC_021316_p46 internal virion protein phrog_342 internal virion protein with endolysin domain head and packaging 1 32475 35573
YP_008058193.1 NC_021316_p1 hypothetical protein phrog_10124 unknown function unknown function 1 874 1080
YP_008058243.1 NC_021316_p51 hypothetical protein phrog_891 terminase small subunit head and packaging 1 39188 39496
YP_008058232.1 NC_021316_p40 hypothetical protein phrog_6633 tail protein tail 1 25405 25590
YP_008058237.1 NC_021316_p45 hypothetical protein phrog_2083 internal virion lysozyme motif head and packaging 1 29580 32465
YP_008058206.1 NC_021316_p14 hypothetical protein phrog_2827 unknown function unknown function 1 5929 6147
YP_008058201.1 NC_021316_p9 hypothetical protein phrog_6769 unknown function unknown function 1 4182 4580
YP_008058216.1 NC_021316_p24 HNH family endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism 1 11996 12433
YP_008058236.1 NC_021316_p44 hypothetical protein phrog_6056 internal virion protein head and packaging 1 28896 29567
YP_008058205.1 NC_021316_p13 hypothetical protein phrog_7955 unknown function unknown function 1 5741 5932
YP_008058194.1 NC_021316_p2 hypothetical protein phrog_35847 unknown function unknown function 1 1510 1791
YP_008058228.1 NC_021316_p36 hypothetical protein phrog_4893 unknown function unknown function 1 21617 21868
YP_008058220.1 NC_021316_p28 hypothetical protein phrog_10210 unknown function unknown function 1 15339 15458
YP_008058199.1 NC_021316_p7 hypothetical protein phrog_38792 unknown function unknown function 1 3738 3926
YP_008058214.1 NC_021316_p22 hypothetical protein phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 10709 11155
YP_008058208.1 NC_021316_p16 hypothetical protein phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 6368 6817
YP_008058221.1 NC_021316_p29 DNA exonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 15491 16447
YP_008058215.1 NC_021316_p23 DNA polymerase I phrog_9556 DNA polymerase DNA, RNA and nucleotide metabolism 1 11152 12012
YP_008058246.1 NC_021316_p54 hypothetical protein phrog_6687 unknown function unknown function 1 41534 41737
YP_008058233.1 NC_021316_p41 hypothetical protein phrog_7599 unknown function unknown function 1 25602 25895
YP_008058222.1 NC_021316_p30 phage-associated homing endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 16428 16865
YP_008058219.1 NC_021316_p27 hypothetical protein phrog_862 unknown function unknown function 1 14392 15282
YP_008058197.1 NC_021316_p5 hypothetical protein phrog_4445 unknown function unknown function 1 2846 3079
YP_008058218.1 NC_021316_p26 HNH family endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism 1 13895 14374
YP_008058211.1 NC_021316_p19 hypothetical protein phrog_7038 unknown function unknown function 1 7919 8155
YP_008058200.1 NC_021316_p8 hypothetical protein phrog_9054 unknown function unknown function 1 3907 4023
YP_008058224.1 NC_021316_p32 hypothetical protein phrog_221 metallo-phosphoesterase other 1 17306 18241
YP_008058212.1 NC_021316_p20 DNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 8168 9466
YP_008058217.1 NC_021316_p25 DNA polymerase I phrog_2573 DNA polymerase DNA, RNA and nucleotide metabolism 1 12426 13886
YP_008058223.1 NC_021316_p31 DNA endonuclease VII phrog_423 endonuclease VII DNA, RNA and nucleotide metabolism 1 16862 17302
YP_008058241.1 NC_021316_p49 hypothetical protein phrog_126 holin/anti-holin lysis 1 38249 38584
YP_008058234.1 NC_021316_p42 tail tubular protein A phrog_446 tail protein tail 1 26036 26596
YP_008058209.1 NC_021316_p17 hypothetical protein phrog_47 DNA primase DNA, RNA and nucleotide metabolism 1 6847 7602
YP_008058213.1 NC_021316_p21 hypothetical protein phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism 1 9469 10449
YP_008058196.1 NC_021316_p4 hypothetical protein phrog_6323 unknown function unknown function 1 2374 2748
YP_008058240.1 NC_021316_p48 hypothetical protein singleton unknown function unknown function 1 38028 38201
YP_008058195.1 NC_021316_p3 hypothetical protein phrog_1448 unknown function unknown function 1 1863 2372
YP_008058207.1 NC_021316_p15 hypothetical protein phrog_2827 unknown function unknown function 1 6137 6346
YP_008058227.1 NC_021316_p35 hypothetical protein phrog_5394 unknown function unknown function 1 21423 21620
YP_008058198.1 NC_021316_p6 hypothetical protein phrog_7131 unknown function unknown function 1 3154 3750
YP_008058226.1 NC_021316_p34 phage-associated RNA polymerase phrog_414 RNA polymerase DNA, RNA and nucleotide metabolism 1 18900 21317
YP_008058235.1 NC_021316_p43 tail tube phrog_457 tail protein tail 1 26605 28896
YP_008058210.1 NC_021316_p18 hypothetical protein phrog_7630 unknown function unknown function 1 7602 7919
YP_008058229.1 NC_021316_p37 head-to-tail joining protein phrog_449 head-tail adaptor connector 1 21877 23433
YP_008058230.1 NC_021316_p38 hypothetical protein phrog_1018 head scaffolding protein head and packaging 1 23442 24302