Genomic map of Mycobacterium phage Chy5 (NC_021318)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_021318
Definition
Mycobacterium phage Chy5, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus; unclassified Fromanvirus.
DB of origin
REFSEQ
Length
51214
Host Name
Mycobacterium tuberculosis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
88
%GC
63.59
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_008058353.1 NC_021318_p79 hypothetical protein phrog_21270 unknown function unknown function -1 48689 48817
YP_008058337.1 NC_021318_p63 hypothetical protein phrog_17366 unknown function unknown function -1 43027 43173
YP_008058287.1 NC_021318_p13 major head subunit phrog_10 major head protein head and packaging 1 12440 13393
YP_008058284.1 NC_021318_p10 portal protein phrog_104 portal protein head and packaging 1 9512 10969
YP_008058330.1 NC_021318_p56 hypothetical protein phrog_2187 unknown function unknown function -1 39978 40121
YP_008058329.1 NC_021318_p55 recombination endonuclease VII phrog_307 endonuclease VII DNA, RNA and nucleotide metabolism -1 39530 39949
YP_008058292.1 NC_021318_p18 hypothetical protein phrog_321 tail completion or Neck1 protein connector 1 14555 14890
YP_008058304.1 NC_021318_p30 hypothetical protein phrog_2269 unknown function unknown function 1 25439 25642
YP_008058323.1 NC_021318_p49 hypothetical protein phrog_354 sigma-K factor transcription regulation -1 36340 37047
YP_008058362.1 NC_021318_p88 hypothetical protein phrog_1392 unknown function unknown function -1 50750 51202
YP_008058351.1 NC_021318_p77 hypothetical protein phrog_855 unknown function unknown function -1 48328 48465
YP_008058293.1 NC_021318_p19 hypothetical protein phrog_123 tail terminator connector 1 14978 15319
YP_008058310.1 NC_021318_p36 hypothetical protein phrog_2099 unknown function unknown function -1 28852 29115
YP_008058350.1 NC_021318_p76 hypothetical protein phrog_421 unknown function unknown function -1 47552 48325
YP_008058333.1 NC_021318_p59 hypothetical protein phrog_3369 unknown function unknown function -1 41328 41483
YP_008058352.1 NC_021318_p78 hypothetical protein phrog_828 unknown function unknown function -1 48476 48679
YP_008058348.1 NC_021318_p74 hypothetical protein phrog_1477 unknown function unknown function -1 47140 47274
YP_008058289.1 NC_021318_p15 hypothetical protein phrog_137 head-tail adaptor Ad1 connector 1 13622 13996
YP_008058347.1 NC_021318_p73 NTPase phrog_1875 unknown function unknown function -1 46913 47143
YP_008058305.1 NC_021318_p31 integrase phrog_1 integrase integration and excision -1 25697 26785
YP_008058302.1 NC_021318_p28 hypothetical protein phrog_737 minor tail protein tail 1 22900 24759
YP_008058308.1 NC_021318_p34 hypothetical protein phrog_542 unknown function unknown function -1 28330 28482
YP_008058320.1 NC_021318_p46 ribonucleotide reductase phrog_367 ribonucleotide reductase DNA, RNA and nucleotide metabolism -1 33896 35788
YP_008058288.1 NC_021318_p14 hypothetical protein phrog_748 head-tail connector protein connector 1 13463 13618
YP_008058341.1 NC_021318_p67 hypothetical protein phrog_642 unknown function unknown function -1 44177 44419
YP_008058318.1 NC_021318_p44 RP thymidylate synthase phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism -1 32531 33238
YP_008058354.1 NC_021318_p80 hypothetical protein phrog_2223 unknown function unknown function -1 48814 49080
YP_008058312.1 NC_021318_p38 hypothetical protein phrog_896 unknown function unknown function -1 29320 29526
YP_008058298.1 NC_021318_p24 minor tail subunit phrog_106 minor tail protein tail 1 19389 20399
YP_008058307.1 NC_021318_p33 deoxycytidinylate deaminase phrog_18355 deoxycytidinylate deaminase DNA, RNA and nucleotide metabolism -1 27944 28099
YP_008058331.1 NC_021318_p57 abhydrolase phrog_789 esterase/lipase other -1 40118 40954
YP_008058360.1 NC_021318_p86 hypothetical protein phrog_3207 unknown function unknown function -1 50309 50575
YP_008058291.1 NC_021318_p17 hypothetical protein phrog_320 head closure Hc1 connector 1 14187 14555
YP_008058296.1 NC_021318_p22 hypothetical protein phrog_3656 tail assembly chaperone tail 1 16479 16865
YP_008058328.1 NC_021318_p54 RP primase/helicase phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 38684 39316
YP_008058361.1 NC_021318_p87 hypothetical protein phrog_519 unknown function unknown function -1 50578 50742
YP_008058356.1 NC_021318_p82 hypothetical protein phrog_586 unknown function unknown function -1 49503 49883
YP_008058355.1 NC_021318_p81 ParB-like nuclease phrog_3256 unknown function unknown function -1 49114 49476
YP_008058294.1 NC_021318_p20 major tail subunit phrog_117 major tail protein tail 1 15335 15928
YP_008058327.1 NC_021318_p53 thioredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism -1 38412 38684
YP_008058295.1 NC_021318_p21 hypothetical protein phrog_330 tail assembly chaperone tail 1 16042 16446
YP_008058315.1 NC_021318_p41 hypothetical protein phrog_2094 unknown function unknown function -1 31577 31912
YP_008058338.1 NC_021318_p64 hypothetical protein phrog_547 phosphoesterase other -1 43170 43769
YP_008058281.1 NC_021318_p7 holin phrog_526 holin lysis 1 6528 6953
YP_008058286.1 NC_021318_p12 hypothetical protein phrog_233 head scaffolding protein head and packaging 1 11929 12399
YP_008058345.1 NC_021318_p71 hypothetical protein phrog_4294 unknown function unknown function -1 46489 46647
YP_008058311.1 NC_021318_p37 hypothetical protein phrog_10511 unknown function unknown function -1 29120 29320
YP_008058303.1 NC_021318_p29 hypothetical protein phrog_356 minor tail protein tail 1 24759 25430
YP_008058314.1 NC_021318_p40 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 29746 31569
YP_008058316.1 NC_021318_p42 hypothetical protein phrog_517 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 31912 32322
YP_008058297.1 NC_021318_p23 tape measure protein phrog_305 tail length tape measure protein tail 1 16855 19368
YP_008058322.1 NC_021318_p48 hypothetical protein phrog_499 unknown function unknown function -1 36171 36356
YP_008058275.1 NC_021318_p1 hypothetical protein phrog_940 nuclease DNA, RNA and nucleotide metabolism 1 745 1557
YP_008058324.1 NC_021318_p50 hypothetical protein phrog_2436 unknown function unknown function -1 37044 37196
YP_008058346.1 NC_021318_p72 hypothetical protein phrog_1178 unknown function unknown function -1 46644 46916
YP_008058326.1 NC_021318_p52 hypothetical protein phrog_474 phosphofructokinase other -1 37960 38415
YP_008058300.1 NC_021318_p26 hypothetical protein phrog_352 minor tail protein tail 1 22203 22646
YP_008058285.1 NC_021318_p11 protease phrog_193 head maturation protease head and packaging 1 10999 11826
YP_008058321.1 NC_021318_p47 hypothetical protein phrog_2046 unknown function unknown function -1 35977 36174
YP_008058349.1 NC_021318_p75 hypothetical protein phrog_439 site-specific recombination directionality factor RDF integration and excision -1 47274 47552
YP_008058277.1 NC_021318_p3 hypothetical protein phrog_8551 unknown function unknown function 1 2450 2701
YP_008058317.1 NC_021318_p43 HTH_Hin-like protein phrog_690 unknown function unknown function -1 32322 32528
YP_008058309.1 NC_021318_p35 hypothetical protein phrog_383 unknown function unknown function -1 28479 28865
YP_008058340.1 NC_021318_p66 hypothetical protein phrog_520 unknown function unknown function -1 43903 44136
YP_008058332.1 NC_021318_p58 hypothetical protein phrog_289 GTP-binding domain other -1 40951 41343
YP_008058358.1 NC_021318_p84 hypothetical protein phrog_2001 unknown function unknown function -1 50008 50121
YP_008058344.1 NC_021318_p70 repressor phrog_357 transcriptional repressor transcription regulation -1 45748 46242
YP_008058339.1 NC_021318_p65 hypothetical protein phrog_2731 unknown function unknown function -1 43766 43906
YP_008058313.1 NC_021318_p39 hypothetical protein phrog_29874 unknown function unknown function -1 29526 29762
YP_008058301.1 NC_021318_p27 hypothetical protein phrog_404 minor tail protein tail 1 22688 22909
YP_008058282.1 NC_021318_p8 lysin B phrog_102 endolysin lysis 1 6950 7714
YP_008058343.1 NC_021318_p69 hypothetical protein phrog_1562 unknown function unknown function -1 45273 45692
YP_008058276.1 NC_021318_p2 hypothetical protein phrog_8314 unknown function unknown function 1 1671 2450
YP_008058279.1 NC_021318_p5 minor tail subunit phrog_1260 minor tail protein tail 1 3584 4552
YP_008058335.1 NC_021318_p61 hypothetical protein phrog_478 site-specific recombination directionality factor RDF integration and excision -1 41879 42265
YP_008058325.1 NC_021318_p51 phosphoesterase phrog_221 metallo-phosphoesterase other -1 37200 37967
YP_008058357.1 NC_021318_p83 hypothetical protein phrog_15034 unknown function unknown function -1 49880 50011
YP_008058283.1 NC_021318_p9 terminase phrog_9 terminase large subunit head and packaging 1 7857 9515
YP_008058290.1 NC_021318_p16 hypothetical protein phrog_830 head-tail connector protein connector 1 13993 14187
YP_008058336.1 NC_021318_p62 P-loop_NTPase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 42297 42947
YP_008058306.1 NC_021318_p32 hypothetical protein phrog_733 excisionase integration and excision 1 27212 27649
YP_008058278.1 NC_021318_p4 hypothetical protein phrog_226 minor tail protein tail 1 3030 3497
YP_008058334.1 NC_021318_p60 hypothetical protein phrog_397 unknown function unknown function -1 41480 41716
YP_008058299.1 NC_021318_p25 minor tail subunit phrog_110 minor tail protein tail 1 20396 22186
YP_008058359.1 NC_021318_p85 hypothetical protein phrog_1946 unknown function unknown function -1 50100 50294
YP_008058280.1 NC_021318_p6 lysin A phrog_317 endolysin lysis 1 5050 6531
YP_008058342.1 NC_021318_p68 RecB-like nuclease phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 44467 45276
YP_008058319.1 NC_021318_p45 hypothetical protein phrog_364 ribonucleoside reductase class II DNA, RNA and nucleotide metabolism -1 33306 33884