Genomic map of Halovirus HHTV-1 (NC_021322)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_021322
Definition
Halovirus HHTV-1, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; unclassified viruses; unclassified DNA viruses; unclassified archaeal dsDNA viruses; Haloviruses.
DB of origin
REFSEQ
Length
49107
Host Name
Haloarcula hispanica
Host domain
Archaea
Is prophage?
undef
Number of proteins
74
%GC
56.46
Number of singletons
60
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_008058738.1 NC_021322_p48 hypothetical protein singleton unknown function unknown function 1 36776 37126
YP_008058758.1 NC_021322_p68 hypothetical protein singleton unknown function unknown function 1 45263 45796
YP_008058745.1 NC_021322_p55 hypothetical protein singleton unknown function unknown function 1 40408 40647
YP_008058757.1 NC_021322_p67 hypothetical protein phrog_464 unknown function unknown function 1 44733 45263
YP_008058700.1 NC_021322_p10 hypothetical protein singleton unknown function unknown function 1 4947 6284
YP_008058713.1 NC_021322_p23 hypothetical protein singleton unknown function unknown function 1 18602 18958
YP_008058720.1 NC_021322_p30 hypothetical protein singleton unknown function unknown function -1 22832 22990
YP_008058747.1 NC_021322_p57 hypothetical protein singleton unknown function unknown function 1 41238 41399
YP_008058701.1 NC_021322_p11 hypothetical protein singleton unknown function unknown function 1 6366 6557
YP_008058759.1 NC_021322_p69 hypothetical protein singleton unknown function unknown function 1 45793 46326
YP_008058751.1 NC_021322_p61 hypothetical protein singleton unknown function unknown function 1 42583 42978
YP_008058737.1 NC_021322_p47 hypothetical protein singleton unknown function unknown function 1 36529 36783
YP_008058740.1 NC_021322_p50 hypothetical protein singleton unknown function unknown function 1 37320 37475
YP_008058763.1 NC_021322_p73 AdoMet-MTase phrog_11619 DNA methyltransferase other 1 47712 48311
YP_008058755.1 NC_021322_p65 holliday junction resolvase phrog_6591 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 44106 44531
YP_008058699.1 NC_021322_p9 terminase large subunit phrog_675 terminase large subunit head and packaging 1 3036 4901
YP_008058706.1 NC_021322_p16 hypothetical protein singleton unknown function unknown function 1 14114 14566
YP_008058721.1 NC_021322_p31 hypothetical protein singleton unknown function unknown function -1 23156 23311
YP_008058741.1 NC_021322_p51 hypothetical protein singleton unknown function unknown function 1 37472 37669
YP_008058698.1 NC_021322_p8 hypothetical protein singleton unknown function unknown function 1 2848 3039
YP_008058703.1 NC_021322_p13 hypothetical protein singleton unknown function unknown function 1 9436 12738
YP_008058717.1 NC_021322_p27 hypothetical protein singleton unknown function unknown function 1 20512 20985
YP_008058752.1 NC_021322_p62 hypothetical protein singleton unknown function unknown function 1 42971 43408
YP_008058714.1 NC_021322_p24 hypothetical protein singleton unknown function unknown function 1 18958 19437
YP_008058750.1 NC_021322_p60 hypothetical protein singleton unknown function unknown function 1 41927 42586
YP_008058728.1 NC_021322_p38 hypothetical protein singleton unknown function unknown function 1 31107 31847
YP_008058739.1 NC_021322_p49 hypothetical protein singleton unknown function unknown function 1 37126 37317
YP_008058726.1 NC_021322_p36 hypothetical protein phrog_18503 unknown function unknown function 1 27332 29917
YP_008058735.1 NC_021322_p45 hypothetical protein singleton unknown function unknown function 1 36225 36338
YP_008058724.1 NC_021322_p34 hypothetical protein singleton unknown function unknown function 1 24625 25020
YP_008058704.1 NC_021322_p14 hypothetical protein singleton unknown function unknown function 1 12735 13022
YP_008058694.1 NC_021322_p4 hypothetical protein singleton unknown function unknown function 1 1492 1821
YP_008058711.1 NC_021322_p21 major capsid protein phrog_1005 major head protein head and packaging 1 17073 18173
YP_008058712.1 NC_021322_p22 hypothetical protein singleton unknown function unknown function 1 18179 18595
YP_008058715.1 NC_021322_p25 hypothetical protein singleton unknown function unknown function 1 19430 19957
YP_008058748.1 NC_021322_p58 hypothetical protein phrog_21750 unknown function unknown function 1 41392 41808
YP_008058691.1 NC_021322_p1 hypothetical protein singleton unknown function unknown function 1 1 594
YP_008058753.1 NC_021322_p63 hypothetical protein singleton unknown function unknown function 1 43398 43625
YP_008058754.1 NC_021322_p64 hypothetical protein singleton unknown function unknown function 1 43625 44113
YP_008058725.1 NC_021322_p35 tape measure singleton tail length tape measure protein tail 1 25013 27325
YP_008058746.1 NC_021322_p56 hypothetical protein phrog_17210 unknown function unknown function 1 40640 41245
YP_008058734.1 NC_021322_p44 hypothetical protein singleton unknown function unknown function 1 35245 36072
YP_008058727.1 NC_021322_p37 hypothetical protein singleton unknown function unknown function 1 29925 31043
YP_008058764.1 NC_021322_p74 hypothetical protein phrog_32075 unknown function unknown function 1 48308 48622
YP_008058762.1 NC_021322_p72 hypothetical protein phrog_2095 unknown function unknown function 1 46924 47712
YP_008058710.1 NC_021322_p20 hypothetical protein singleton unknown function unknown function 1 16659 17066
YP_008058708.1 NC_021322_p18 hypothetical protein singleton unknown function unknown function -1 14886 15119
YP_008058743.1 NC_021322_p53 hypothetical protein singleton unknown function unknown function 1 39049 39399
YP_008058695.1 NC_021322_p5 hypothetical protein singleton unknown function unknown function 1 1818 2087
YP_008058736.1 NC_021322_p46 hypothetical protein singleton unknown function unknown function 1 36335 36532
YP_008058705.1 NC_021322_p15 gpF-like protein singleton unknown function unknown function 1 13022 14008
YP_008058696.1 NC_021322_p6 hypothetical protein singleton unknown function unknown function 1 2155 2457
YP_008058697.1 NC_021322_p7 hypothetical protein singleton unknown function unknown function 1 2447 2848
YP_008058716.1 NC_021322_p26 hypothetical protein singleton unknown function unknown function 1 19957 20505
YP_008058707.1 NC_021322_p17 hypothetical protein phrog_38411 unknown function unknown function 1 14563 14904
YP_008058702.1 NC_021322_p12 hypothetical protein singleton unknown function unknown function 1 6605 9439
YP_008058730.1 NC_021322_p40 hypothetical protein singleton unknown function unknown function 1 32482 34218
YP_008058709.1 NC_021322_p19 hypothetical protein singleton unknown function unknown function 1 15199 16659
YP_008058732.1 NC_021322_p42 hypothetical protein singleton unknown function unknown function 1 34585 34842
YP_008058756.1 NC_021322_p66 hypothetical protein singleton unknown function unknown function 1 44518 44736
YP_008058693.1 NC_021322_p3 hypothetical protein singleton unknown function unknown function 1 815 1495
YP_008058744.1 NC_021322_p54 PCNA protein phrog_947 DNA polymerase processivity factor DNA, RNA and nucleotide metabolism 1 39482 40285
YP_008058692.1 NC_021322_p2 hypothetical protein singleton unknown function unknown function 1 594 818
YP_008058719.1 NC_021322_p29 hypothetical protein singleton unknown function unknown function 1 22013 22762
YP_008058749.1 NC_021322_p59 hypothetical protein singleton unknown function unknown function 1 41805 41930
YP_008058723.1 NC_021322_p33 hypothetical protein singleton unknown function unknown function 1 24105 24617
YP_008058718.1 NC_021322_p28 hypothetical protein phrog_290 minor tail protein tail 1 20986 22005
YP_008058742.1 NC_021322_p52 hypothetical protein singleton unknown function unknown function 1 37802 39052
YP_008058722.1 NC_021322_p32 hypothetical protein singleton unknown function unknown function -1 23314 23928
YP_008058761.1 NC_021322_p71 hypothetical protein singleton unknown function unknown function 1 46732 46893
YP_008058733.1 NC_021322_p43 hypothetical protein singleton unknown function unknown function 1 35069 35248
YP_008058760.1 NC_021322_p70 hypothetical protein singleton unknown function unknown function 1 46323 46637
YP_008058731.1 NC_021322_p41 hypothetical protein singleton unknown function unknown function 1 34312 34575
YP_008058729.1 NC_021322_p39 hypothetical protein phrog_5417 unknown function unknown function 1 31844 32461