| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_021322 |
Definition |
Halovirus HHTV-1, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; unclassified viruses; unclassified DNA viruses; unclassified archaeal dsDNA viruses; Haloviruses. |
DB of origin |
REFSEQ |
Length |
49107 |
Host Name |
Haloarcula hispanica |
Host domain |
Archaea |
Is prophage? |
undef |
Number of proteins |
74 |
%GC |
56.46 |
Number of singletons |
60 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_008058738.1 | NC_021322_p48 | hypothetical protein | singleton | unknown function | unknown function | 1 | 36776 | 37126 |
| YP_008058758.1 | NC_021322_p68 | hypothetical protein | singleton | unknown function | unknown function | 1 | 45263 | 45796 |
| YP_008058745.1 | NC_021322_p55 | hypothetical protein | singleton | unknown function | unknown function | 1 | 40408 | 40647 |
| YP_008058757.1 | NC_021322_p67 | hypothetical protein | phrog_464 | unknown function | unknown function | 1 | 44733 | 45263 |
| YP_008058700.1 | NC_021322_p10 | hypothetical protein | singleton | unknown function | unknown function | 1 | 4947 | 6284 |
| YP_008058713.1 | NC_021322_p23 | hypothetical protein | singleton | unknown function | unknown function | 1 | 18602 | 18958 |
| YP_008058720.1 | NC_021322_p30 | hypothetical protein | singleton | unknown function | unknown function | -1 | 22832 | 22990 |
| YP_008058747.1 | NC_021322_p57 | hypothetical protein | singleton | unknown function | unknown function | 1 | 41238 | 41399 |
| YP_008058701.1 | NC_021322_p11 | hypothetical protein | singleton | unknown function | unknown function | 1 | 6366 | 6557 |
| YP_008058759.1 | NC_021322_p69 | hypothetical protein | singleton | unknown function | unknown function | 1 | 45793 | 46326 |
| YP_008058751.1 | NC_021322_p61 | hypothetical protein | singleton | unknown function | unknown function | 1 | 42583 | 42978 |
| YP_008058737.1 | NC_021322_p47 | hypothetical protein | singleton | unknown function | unknown function | 1 | 36529 | 36783 |
| YP_008058740.1 | NC_021322_p50 | hypothetical protein | singleton | unknown function | unknown function | 1 | 37320 | 37475 |
| YP_008058763.1 | NC_021322_p73 | AdoMet-MTase | phrog_11619 | DNA methyltransferase | other | 1 | 47712 | 48311 |
| YP_008058755.1 | NC_021322_p65 | holliday junction resolvase | phrog_6591 | Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 44106 | 44531 |
| YP_008058699.1 | NC_021322_p9 | terminase large subunit | phrog_675 | terminase large subunit | head and packaging | 1 | 3036 | 4901 |
| YP_008058706.1 | NC_021322_p16 | hypothetical protein | singleton | unknown function | unknown function | 1 | 14114 | 14566 |
| YP_008058721.1 | NC_021322_p31 | hypothetical protein | singleton | unknown function | unknown function | -1 | 23156 | 23311 |
| YP_008058741.1 | NC_021322_p51 | hypothetical protein | singleton | unknown function | unknown function | 1 | 37472 | 37669 |
| YP_008058698.1 | NC_021322_p8 | hypothetical protein | singleton | unknown function | unknown function | 1 | 2848 | 3039 |
| YP_008058703.1 | NC_021322_p13 | hypothetical protein | singleton | unknown function | unknown function | 1 | 9436 | 12738 |
| YP_008058717.1 | NC_021322_p27 | hypothetical protein | singleton | unknown function | unknown function | 1 | 20512 | 20985 |
| YP_008058752.1 | NC_021322_p62 | hypothetical protein | singleton | unknown function | unknown function | 1 | 42971 | 43408 |
| YP_008058714.1 | NC_021322_p24 | hypothetical protein | singleton | unknown function | unknown function | 1 | 18958 | 19437 |
| YP_008058750.1 | NC_021322_p60 | hypothetical protein | singleton | unknown function | unknown function | 1 | 41927 | 42586 |
| YP_008058728.1 | NC_021322_p38 | hypothetical protein | singleton | unknown function | unknown function | 1 | 31107 | 31847 |
| YP_008058739.1 | NC_021322_p49 | hypothetical protein | singleton | unknown function | unknown function | 1 | 37126 | 37317 |
| YP_008058726.1 | NC_021322_p36 | hypothetical protein | phrog_18503 | unknown function | unknown function | 1 | 27332 | 29917 |
| YP_008058735.1 | NC_021322_p45 | hypothetical protein | singleton | unknown function | unknown function | 1 | 36225 | 36338 |
| YP_008058724.1 | NC_021322_p34 | hypothetical protein | singleton | unknown function | unknown function | 1 | 24625 | 25020 |
| YP_008058704.1 | NC_021322_p14 | hypothetical protein | singleton | unknown function | unknown function | 1 | 12735 | 13022 |
| YP_008058694.1 | NC_021322_p4 | hypothetical protein | singleton | unknown function | unknown function | 1 | 1492 | 1821 |
| YP_008058711.1 | NC_021322_p21 | major capsid protein | phrog_1005 | major head protein | head and packaging | 1 | 17073 | 18173 |
| YP_008058712.1 | NC_021322_p22 | hypothetical protein | singleton | unknown function | unknown function | 1 | 18179 | 18595 |
| YP_008058715.1 | NC_021322_p25 | hypothetical protein | singleton | unknown function | unknown function | 1 | 19430 | 19957 |
| YP_008058748.1 | NC_021322_p58 | hypothetical protein | phrog_21750 | unknown function | unknown function | 1 | 41392 | 41808 |
| YP_008058691.1 | NC_021322_p1 | hypothetical protein | singleton | unknown function | unknown function | 1 | 1 | 594 |
| YP_008058753.1 | NC_021322_p63 | hypothetical protein | singleton | unknown function | unknown function | 1 | 43398 | 43625 |
| YP_008058754.1 | NC_021322_p64 | hypothetical protein | singleton | unknown function | unknown function | 1 | 43625 | 44113 |
| YP_008058725.1 | NC_021322_p35 | tape measure | singleton | tail length tape measure protein | tail | 1 | 25013 | 27325 |
| YP_008058746.1 | NC_021322_p56 | hypothetical protein | phrog_17210 | unknown function | unknown function | 1 | 40640 | 41245 |
| YP_008058734.1 | NC_021322_p44 | hypothetical protein | singleton | unknown function | unknown function | 1 | 35245 | 36072 |
| YP_008058727.1 | NC_021322_p37 | hypothetical protein | singleton | unknown function | unknown function | 1 | 29925 | 31043 |
| YP_008058764.1 | NC_021322_p74 | hypothetical protein | phrog_32075 | unknown function | unknown function | 1 | 48308 | 48622 |
| YP_008058762.1 | NC_021322_p72 | hypothetical protein | phrog_2095 | unknown function | unknown function | 1 | 46924 | 47712 |
| YP_008058710.1 | NC_021322_p20 | hypothetical protein | singleton | unknown function | unknown function | 1 | 16659 | 17066 |
| YP_008058708.1 | NC_021322_p18 | hypothetical protein | singleton | unknown function | unknown function | -1 | 14886 | 15119 |
| YP_008058743.1 | NC_021322_p53 | hypothetical protein | singleton | unknown function | unknown function | 1 | 39049 | 39399 |
| YP_008058695.1 | NC_021322_p5 | hypothetical protein | singleton | unknown function | unknown function | 1 | 1818 | 2087 |
| YP_008058736.1 | NC_021322_p46 | hypothetical protein | singleton | unknown function | unknown function | 1 | 36335 | 36532 |
| YP_008058705.1 | NC_021322_p15 | gpF-like protein | singleton | unknown function | unknown function | 1 | 13022 | 14008 |
| YP_008058696.1 | NC_021322_p6 | hypothetical protein | singleton | unknown function | unknown function | 1 | 2155 | 2457 |
| YP_008058697.1 | NC_021322_p7 | hypothetical protein | singleton | unknown function | unknown function | 1 | 2447 | 2848 |
| YP_008058716.1 | NC_021322_p26 | hypothetical protein | singleton | unknown function | unknown function | 1 | 19957 | 20505 |
| YP_008058707.1 | NC_021322_p17 | hypothetical protein | phrog_38411 | unknown function | unknown function | 1 | 14563 | 14904 |
| YP_008058702.1 | NC_021322_p12 | hypothetical protein | singleton | unknown function | unknown function | 1 | 6605 | 9439 |
| YP_008058730.1 | NC_021322_p40 | hypothetical protein | singleton | unknown function | unknown function | 1 | 32482 | 34218 |
| YP_008058709.1 | NC_021322_p19 | hypothetical protein | singleton | unknown function | unknown function | 1 | 15199 | 16659 |
| YP_008058732.1 | NC_021322_p42 | hypothetical protein | singleton | unknown function | unknown function | 1 | 34585 | 34842 |
| YP_008058756.1 | NC_021322_p66 | hypothetical protein | singleton | unknown function | unknown function | 1 | 44518 | 44736 |
| YP_008058693.1 | NC_021322_p3 | hypothetical protein | singleton | unknown function | unknown function | 1 | 815 | 1495 |
| YP_008058744.1 | NC_021322_p54 | PCNA protein | phrog_947 | DNA polymerase processivity factor | DNA, RNA and nucleotide metabolism | 1 | 39482 | 40285 |
| YP_008058692.1 | NC_021322_p2 | hypothetical protein | singleton | unknown function | unknown function | 1 | 594 | 818 |
| YP_008058719.1 | NC_021322_p29 | hypothetical protein | singleton | unknown function | unknown function | 1 | 22013 | 22762 |
| YP_008058749.1 | NC_021322_p59 | hypothetical protein | singleton | unknown function | unknown function | 1 | 41805 | 41930 |
| YP_008058723.1 | NC_021322_p33 | hypothetical protein | singleton | unknown function | unknown function | 1 | 24105 | 24617 |
| YP_008058718.1 | NC_021322_p28 | hypothetical protein | phrog_290 | minor tail protein | tail | 1 | 20986 | 22005 |
| YP_008058742.1 | NC_021322_p52 | hypothetical protein | singleton | unknown function | unknown function | 1 | 37802 | 39052 |
| YP_008058722.1 | NC_021322_p32 | hypothetical protein | singleton | unknown function | unknown function | -1 | 23314 | 23928 |
| YP_008058761.1 | NC_021322_p71 | hypothetical protein | singleton | unknown function | unknown function | 1 | 46732 | 46893 |
| YP_008058733.1 | NC_021322_p43 | hypothetical protein | singleton | unknown function | unknown function | 1 | 35069 | 35248 |
| YP_008058760.1 | NC_021322_p70 | hypothetical protein | singleton | unknown function | unknown function | 1 | 46323 | 46637 |
| YP_008058731.1 | NC_021322_p41 | hypothetical protein | singleton | unknown function | unknown function | 1 | 34312 | 34575 |
| YP_008058729.1 | NC_021322_p39 | hypothetical protein | phrog_5417 | unknown function | unknown function | 1 | 31844 | 32461 |