| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_021325 |
Definition |
Clostridium phage vB_CpeS-CP51, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae. |
DB of origin |
REFSEQ |
Length |
39108 |
Host Name |
Clostridium perfringens |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
50 |
%GC |
28.07 |
Number of singletons |
8 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_008058961.1 | NC_021325_p38 | hypothetical protein | singleton | unknown function | unknown function | 1 | 32212 | 32346 |
| YP_008058941.1 | NC_021325_p18 | phage tape measure protein | phrog_1535 | tail length tape measure protein | tail | 1 | 10303 | 13515 |
| YP_008058939.1 | NC_021325_p16 | hypothetical protein | phrog_8300 | unknown function | unknown function | 1 | 9572 | 9940 |
| YP_008058943.1 | NC_021325_p20 | hypothetical protein | phrog_15246 | unknown function | unknown function | 1 | 13895 | 14161 |
| YP_008058926.1 | NC_021325_p3 | phage portal protein | phrog_533 | portal protein | head and packaging | 1 | 2144 | 3664 |
| YP_008058924.1 | NC_021325_p1 | hypothetical protein | phrog_509 | terminase small subunit | head and packaging | 1 | 35 | 781 |
| YP_008058962.1 | NC_021325_p39 | hypothetical protein | phrog_345 | replication initiation O-like | DNA, RNA and nucleotide metabolism | 1 | 32365 | 33186 |
| YP_008058963.1 | NC_021325_p40 | DNA replication protein | phrog_50 | DnaC-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 33158 | 33895 |
| YP_008058947.1 | NC_021325_p24 | hypothetical protein | phrog_9492 | unknown function | unknown function | 1 | 21739 | 22155 |
| YP_008058951.1 | NC_021325_p28 | hypothetical protein | singleton | unknown function | unknown function | 1 | 25702 | 26793 |
| YP_008058934.1 | NC_021325_p11 | head-tail connector protein | phrog_541 | head-tail adaptor | connector | 1 | 7630 | 7992 |
| YP_008058933.1 | NC_021325_p10 | hypothetical protein | phrog_1378 | unknown function | unknown function | 1 | 7325 | 7594 |
| YP_008058937.1 | NC_021325_p14 | hypothetical protein | phrog_2595 | head-tail connector protein | connector | 1 | 8705 | 9091 |
| YP_008058958.1 | NC_021325_p35 | hypothetical protein | singleton | unknown function | unknown function | 1 | 30957 | 31178 |
| YP_008058929.1 | NC_021325_p6 | hypothetical protein | phrog_1048 | unknown function | unknown function | 1 | 5008 | 5214 |
| YP_008058960.1 | NC_021325_p37 | sporulation sigma factor | phrog_351 | RNA polymerase sigma factor | transcription regulation | 1 | 31647 | 32201 |
| YP_008058965.1 | NC_021325_p42 | helix-turn-helix domain protein | phrog_10086 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 34381 | 34656 |
| YP_008058942.1 | NC_021325_p19 | hypothetical protein | phrog_1194 | unknown function | unknown function | 1 | 13528 | 13872 |
| YP_008058953.1 | NC_021325_p30 | hypothetical protein | phrog_87 | metallo-protease | other | -1 | 28914 | 29342 |
| YP_008058959.1 | NC_021325_p36 | hypothetical protein | phrog_1090 | unknown function | unknown function | -1 | 31171 | 31446 |
| YP_008058970.1 | NC_021325_p47 | hypothetical protein | singleton | unknown function | unknown function | 1 | 36390 | 36554 |
| YP_008058927.1 | NC_021325_p4 | phage minor capsid protein | phrog_581 | minor head protein | head and packaging | 1 | 3648 | 4886 |
| YP_008058954.1 | NC_021325_p31 | helix-turn-helix domain protein | phrog_8 | transcriptional regulator | transcription regulation | -1 | 29442 | 29879 |
| YP_008058945.1 | NC_021325_p22 | hypothetical protein | phrog_16267 | unknown function | unknown function | 1 | 14644 | 21261 |
| YP_008058936.1 | NC_021325_p13 | hypothetical protein | phrog_556 | minor head protein | head and packaging | 1 | 8322 | 8705 |
| YP_008058956.1 | NC_021325_p33 | hypothetical protein | phrog_29444 | unknown function | unknown function | 1 | 30459 | 30665 |
| YP_008058946.1 | NC_021325_p23 | holin | phrog_199 | holin | lysis | 1 | 21282 | 21698 |
| YP_008058931.1 | NC_021325_p8 | hypothetical protein | phrog_2303 | head scaffolding protein | head and packaging | 1 | 5777 | 6382 |
| YP_008058950.1 | NC_021325_p27 | hypothetical protein | singleton | unknown function | unknown function | 1 | 24453 | 25733 |
| YP_008058944.1 | NC_021325_p21 | hypothetical protein | phrog_1401 | unknown function | unknown function | 1 | 14228 | 14608 |
| YP_008058932.1 | NC_021325_p9 | hypothetical protein | phrog_422 | major head protein | head and packaging | 1 | 6403 | 7308 |
| YP_008058957.1 | NC_021325_p34 | hypothetical protein | phrog_16446 | unknown function | unknown function | 1 | 30764 | 30943 |
| YP_008058940.1 | NC_021325_p17 | hypothetical protein | phrog_8355 | unknown function | unknown function | 1 | 9900 | 10262 |
| YP_008058968.1 | NC_021325_p45 | hypothetical protein | phrog_9628 | unknown function | unknown function | 1 | 35482 | 35946 |
| YP_008058967.1 | NC_021325_p44 | hypothetical protein | phrog_36 | transcriptional regulator | transcription regulation | 1 | 34972 | 35298 |
| YP_008058952.1 | NC_021325_p29 | resolvase | phrog_95 | integrase | integration and excision | -1 | 26914 | 28881 |
| YP_008058930.1 | NC_021325_p7 | hypothetical protein | phrog_9467 | unknown function | unknown function | 1 | 5214 | 5678 |
| YP_008058964.1 | NC_021325_p41 | hypothetical protein | phrog_23492 | unknown function | unknown function | 1 | 33955 | 34278 |
| YP_008058949.1 | NC_021325_p26 | hypothetical protein | phrog_3845 | unknown function | unknown function | 1 | 23503 | 24141 |
| YP_008058928.1 | NC_021325_p5 | hypothetical protein | singleton | unknown function | unknown function | 1 | 4886 | 5005 |
| YP_008058938.1 | NC_021325_p15 | hypothetical protein | phrog_820 | major tail protein | tail | 1 | 9101 | 9559 |
| YP_008058935.1 | NC_021325_p12 | hypothetical protein | phrog_8710 | unknown function | unknown function | 1 | 7996 | 8322 |
| YP_008058972.1 | NC_021325_p49 | phage integrase | phrog_216 | integrase | integration and excision | 1 | 37393 | 38052 |
| YP_008058966.1 | NC_021325_p43 | stage III sporulation protein D | phrog_11726 | sporulation stage III protein D | moron, auxiliary metabolic gene and host takeover | 1 | 34665 | 34967 |
| YP_008058973.1 | NC_021325_p50 | resolvase | phrog_125 | DNA invertase | DNA, RNA and nucleotide metabolism | 1 | 38534 | 39094 |
| YP_008058969.1 | NC_021325_p46 | hypothetical protein | singleton | unknown function | unknown function | 1 | 36202 | 36333 |
| YP_008058955.1 | NC_021325_p32 | helix-turn-helix domain protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 30087 | 30281 |
| YP_008058948.1 | NC_021325_p25 | endolysin | phrog_1794 | amidase | lysis | 1 | 22240 | 23373 |
| YP_008058925.1 | NC_021325_p2 | phage terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 774 | 2141 |
| YP_008058971.1 | NC_021325_p48 | hypothetical protein | singleton | unknown function | unknown function | -1 | 36571 | 36966 |