Genomic map of Clostridium phage vB_CpeS-CP51 (NC_021325)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_021325
Definition
Clostridium phage vB_CpeS-CP51, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
39108
Host Name
Clostridium perfringens
Host domain
Bacteria
Is prophage?
undef
Number of proteins
50
%GC
28.07
Number of singletons
8
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_008058961.1 NC_021325_p38 hypothetical protein singleton unknown function unknown function 1 32212 32346
YP_008058941.1 NC_021325_p18 phage tape measure protein phrog_1535 tail length tape measure protein tail 1 10303 13515
YP_008058939.1 NC_021325_p16 hypothetical protein phrog_8300 unknown function unknown function 1 9572 9940
YP_008058943.1 NC_021325_p20 hypothetical protein phrog_15246 unknown function unknown function 1 13895 14161
YP_008058926.1 NC_021325_p3 phage portal protein phrog_533 portal protein head and packaging 1 2144 3664
YP_008058924.1 NC_021325_p1 hypothetical protein phrog_509 terminase small subunit head and packaging 1 35 781
YP_008058962.1 NC_021325_p39 hypothetical protein phrog_345 replication initiation O-like DNA, RNA and nucleotide metabolism 1 32365 33186
YP_008058963.1 NC_021325_p40 DNA replication protein phrog_50 DnaC-like helicase loader DNA, RNA and nucleotide metabolism 1 33158 33895
YP_008058947.1 NC_021325_p24 hypothetical protein phrog_9492 unknown function unknown function 1 21739 22155
YP_008058951.1 NC_021325_p28 hypothetical protein singleton unknown function unknown function 1 25702 26793
YP_008058934.1 NC_021325_p11 head-tail connector protein phrog_541 head-tail adaptor connector 1 7630 7992
YP_008058933.1 NC_021325_p10 hypothetical protein phrog_1378 unknown function unknown function 1 7325 7594
YP_008058937.1 NC_021325_p14 hypothetical protein phrog_2595 head-tail connector protein connector 1 8705 9091
YP_008058958.1 NC_021325_p35 hypothetical protein singleton unknown function unknown function 1 30957 31178
YP_008058929.1 NC_021325_p6 hypothetical protein phrog_1048 unknown function unknown function 1 5008 5214
YP_008058960.1 NC_021325_p37 sporulation sigma factor phrog_351 RNA polymerase sigma factor transcription regulation 1 31647 32201
YP_008058965.1 NC_021325_p42 helix-turn-helix domain protein phrog_10086 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 34381 34656
YP_008058942.1 NC_021325_p19 hypothetical protein phrog_1194 unknown function unknown function 1 13528 13872
YP_008058953.1 NC_021325_p30 hypothetical protein phrog_87 metallo-protease other -1 28914 29342
YP_008058959.1 NC_021325_p36 hypothetical protein phrog_1090 unknown function unknown function -1 31171 31446
YP_008058970.1 NC_021325_p47 hypothetical protein singleton unknown function unknown function 1 36390 36554
YP_008058927.1 NC_021325_p4 phage minor capsid protein phrog_581 minor head protein head and packaging 1 3648 4886
YP_008058954.1 NC_021325_p31 helix-turn-helix domain protein phrog_8 transcriptional regulator transcription regulation -1 29442 29879
YP_008058945.1 NC_021325_p22 hypothetical protein phrog_16267 unknown function unknown function 1 14644 21261
YP_008058936.1 NC_021325_p13 hypothetical protein phrog_556 minor head protein head and packaging 1 8322 8705
YP_008058956.1 NC_021325_p33 hypothetical protein phrog_29444 unknown function unknown function 1 30459 30665
YP_008058946.1 NC_021325_p23 holin phrog_199 holin lysis 1 21282 21698
YP_008058931.1 NC_021325_p8 hypothetical protein phrog_2303 head scaffolding protein head and packaging 1 5777 6382
YP_008058950.1 NC_021325_p27 hypothetical protein singleton unknown function unknown function 1 24453 25733
YP_008058944.1 NC_021325_p21 hypothetical protein phrog_1401 unknown function unknown function 1 14228 14608
YP_008058932.1 NC_021325_p9 hypothetical protein phrog_422 major head protein head and packaging 1 6403 7308
YP_008058957.1 NC_021325_p34 hypothetical protein phrog_16446 unknown function unknown function 1 30764 30943
YP_008058940.1 NC_021325_p17 hypothetical protein phrog_8355 unknown function unknown function 1 9900 10262
YP_008058968.1 NC_021325_p45 hypothetical protein phrog_9628 unknown function unknown function 1 35482 35946
YP_008058967.1 NC_021325_p44 hypothetical protein phrog_36 transcriptional regulator transcription regulation 1 34972 35298
YP_008058952.1 NC_021325_p29 resolvase phrog_95 integrase integration and excision -1 26914 28881
YP_008058930.1 NC_021325_p7 hypothetical protein phrog_9467 unknown function unknown function 1 5214 5678
YP_008058964.1 NC_021325_p41 hypothetical protein phrog_23492 unknown function unknown function 1 33955 34278
YP_008058949.1 NC_021325_p26 hypothetical protein phrog_3845 unknown function unknown function 1 23503 24141
YP_008058928.1 NC_021325_p5 hypothetical protein singleton unknown function unknown function 1 4886 5005
YP_008058938.1 NC_021325_p15 hypothetical protein phrog_820 major tail protein tail 1 9101 9559
YP_008058935.1 NC_021325_p12 hypothetical protein phrog_8710 unknown function unknown function 1 7996 8322
YP_008058972.1 NC_021325_p49 phage integrase phrog_216 integrase integration and excision 1 37393 38052
YP_008058966.1 NC_021325_p43 stage III sporulation protein D phrog_11726 sporulation stage III protein D moron, auxiliary metabolic gene and host takeover 1 34665 34967
YP_008058973.1 NC_021325_p50 resolvase phrog_125 DNA invertase DNA, RNA and nucleotide metabolism 1 38534 39094
YP_008058969.1 NC_021325_p46 hypothetical protein singleton unknown function unknown function 1 36202 36333
YP_008058955.1 NC_021325_p32 helix-turn-helix domain protein phrog_3 transcriptional repressor transcription regulation 1 30087 30281
YP_008058948.1 NC_021325_p25 endolysin phrog_1794 amidase lysis 1 22240 23373
YP_008058925.1 NC_021325_p2 phage terminase large subunit phrog_2 terminase large subunit head and packaging 1 774 2141
YP_008058971.1 NC_021325_p48 hypothetical protein singleton unknown function unknown function -1 36571 36966