Genomic map of Mycobacterium phage WIVsmall (NC_021334)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_021334
Definition
Mycobacterium phage WIVsmall, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Cheoctovirus; unclassified Cheoctovirus.
DB of origin
REFSEQ
Length
53359
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
83
%GC
61
Number of singletons
11
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_008059952.1 NC_021334_p51 LysA phrog_700 endolysin lysis -1 26921 28198
YP_008059916.1 NC_021334_p15 hypothetical protein phrog_2131 unknown function unknown function -1 7444 7932
YP_008059971.1 NC_021334_p70 HNH endonuclease phrog_3593 HNH endonuclease DNA, RNA and nucleotide metabolism -1 43472 44011
YP_008059959.1 NC_021334_p58 hypothetical protein phrog_644 unknown function unknown function -1 30830 31282
YP_008059922.1 NC_021334_p21 hypothetical protein phrog_3290 single strand annealing protein DNA, RNA and nucleotide metabolism -1 11238 11816
YP_008059940.1 NC_021334_p39 DNA-binding protein phrog_3949 transcriptional repressor transcription regulation 1 20218 20721
YP_008059929.1 NC_021334_p28 WhiB family regulatory protein phrog_1333 unknown function unknown function -1 14174 14668
YP_008059932.1 NC_021334_p31 hypothetical protein phrog_3416 unknown function unknown function -1 15369 16169
YP_008059910.1 NC_021334_p9 hypothetical protein phrog_908 unknown function unknown function -1 4816 5496
YP_008059956.1 NC_021334_p55 hypothetical protein phrog_411 unknown function unknown function -1 28792 29088
YP_008059972.1 NC_021334_p71 hypothetical protein phrog_15976 tail assembly chaperone tail -1 44035 44538
YP_008059906.1 NC_021334_p5 hypothetical protein phrog_1385 unknown function unknown function -1 2820 3029
YP_008059931.1 NC_021334_p30 hypothetical protein phrog_1849 unknown function unknown function -1 15012 15290
YP_008059905.1 NC_021334_p4 glycosyltransferase phrog_1579 glycosyltransferase moron, auxiliary metabolic gene and host takeover -1 1204 2823
YP_008059930.1 NC_021334_p29 hypothetical protein phrog_658 unknown function unknown function -1 14668 15015
YP_008059902.1 NC_021334_p1 glycosyltransferase phrog_854 glucosyltransferase moron, auxiliary metabolic gene and host takeover -1 83 697
YP_008059968.1 NC_021334_p67 tape-measure protein phrog_1942 tail length tape measure protein tail -1 39834 43472
YP_008059951.1 NC_021334_p50 LysB phrog_102 endolysin lysis -1 25920 26921
YP_008059908.1 NC_021334_p7 GIY-YIG nuclease phrog_1869 unknown function unknown function -1 3866 4030
YP_008059925.1 NC_021334_p24 hypothetical protein phrog_1834 unknown function unknown function -1 12663 12893
YP_008059934.1 NC_021334_p33 hypothetical protein phrog_1797 unknown function unknown function -1 16199 16765
YP_008059917.1 NC_021334_p16 hypothetical protein phrog_1573 DNA methyltransferase other -1 8063 8470
YP_008059975.1 NC_021334_p74 hypothetical protein phrog_813 head-tail adaptor connector -1 46008 46412
YP_008059920.1 NC_021334_p19 hypothetical protein phrog_2704 unknown function unknown function -1 10632 10778
YP_008059976.1 NC_021334_p75 hypothetical protein singleton unknown function unknown function -1 46402 46626
YP_008059979.1 NC_021334_p78 hypothetical protein phrog_4638 head scaffolding protein head and packaging -1 48416 48952
YP_008059924.1 NC_021334_p23 hypothetical protein phrog_2060 DNA methyltransferase other -1 12292 12666
YP_008059950.1 NC_021334_p49 hypothetical protein phrog_404 minor tail protein tail -1 25299 25673
YP_008059955.1 NC_021334_p54 hypothetical protein phrog_932 unknown function unknown function -1 28636 28785
YP_008059911.1 NC_021334_p10 hypothetical protein phrog_2247 unknown function unknown function -1 5499 5795
YP_008059983.1 NC_021334_p82 hypothetical protein phrog_4479 terminase small subunit head and packaging -1 52661 52915
YP_008059984.1 NC_021334_p83 HNH endonuclease phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism -1 52988 53320
YP_008059946.1 NC_021334_p45 hypothetical protein phrog_5648 unknown function unknown function 1 23399 23758
YP_008059941.1 NC_021334_p40 Pin protein phrog_1948 unknown function unknown function 1 20984 21430
YP_008059982.1 NC_021334_p81 terminase phrog_2 terminase large subunit head and packaging -1 51202 52689
YP_008059960.1 NC_021334_p59 hypothetical protein phrog_6374 unknown function unknown function -1 31299 31745
YP_008059961.1 NC_021334_p60 structural protein phrog_356 minor tail protein tail -1 31468 33264
YP_008059937.1 NC_021334_p36 hypothetical protein phrog_5931 unknown function unknown function -1 18076 18891
YP_008059919.1 NC_021334_p18 hypothetical protein phrog_3171 replication initiation protein DNA, RNA and nucleotide metabolism -1 9301 10263
YP_008059978.1 NC_021334_p77 major capsid subunit phrog_10 major head protein head and packaging -1 47445 48353
YP_008059942.1 NC_021334_p41 intergrase phrog_1 integrase integration and excision -1 21522 22640
YP_008059957.1 NC_021334_p56 hypothetical protein phrog_754 minor tail protein tail -1 29452 30291
YP_008059970.1 NC_021334_p69 hypothetical protein singleton unknown function unknown function 1 42931 43464
YP_008059921.1 NC_021334_p20 hypothetical protein phrog_6573 unknown function unknown function -1 10778 10882
YP_008059966.1 NC_021334_p65 structural protein phrog_106 minor tail protein tail -1 38124 39833
YP_008059939.1 NC_021334_p38 helix-turn-helix XRE-family like protein phrog_6267 transcriptional repressor transcription regulation -1 19729 20034
YP_008059969.1 NC_021334_p68 hypothetical protein singleton unknown function unknown function 1 42040 42633
YP_008059973.1 NC_021334_p72 hypothetical protein phrog_621 tail assembly chaperone tail -1 44420 44971
YP_008059904.1 NC_021334_p3 hypothetical protein phrog_1693 unknown function unknown function -1 989 1201
YP_008059958.1 NC_021334_p57 hypothetical protein phrog_2012 minor tail protein tail -1 30288 30815
YP_008059928.1 NC_021334_p27 hypothetical protein phrog_2096 unknown function unknown function -1 13692 14129
YP_008059965.1 NC_021334_p64 structural protein phrog_110 minor tail protein tail -1 36332 38065
YP_008059926.1 NC_021334_p25 LuxR-like protein phrog_664 DNA binding protein DNA, RNA and nucleotide metabolism -1 13048 13413
YP_008059907.1 NC_021334_p6 hypothetical protein phrog_1186 unknown function unknown function -1 3059 3460
YP_008059923.1 NC_021334_p22 HNH endonuclease phrog_826 HNH endonuclease DNA, RNA and nucleotide metabolism -1 11813 12295
YP_008059915.1 NC_021334_p14 hypothetical protein phrog_2939 unknown function unknown function -1 7158 7385
YP_008059964.1 NC_021334_p63 tail protein phrog_732 minor tail protein tail -1 35444 36289
YP_008059914.1 NC_021334_p13 hypothetical protein phrog_1900 mobile element MPME moron, auxiliary metabolic gene and host takeover -1 6719 7075
YP_008059948.1 NC_021334_p47 3'-5' exonuclease phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism -1 24234 25055
YP_008059935.1 NC_021334_p34 pyocin activator protein phrog_1840 excisionase integration and excision -1 17489 17746
YP_008059974.1 NC_021334_p73 hypothetical protein phrog_476 major tail protein tail -1 45090 45899
YP_008059949.1 NC_021334_p48 hypothetical protein singleton unknown function unknown function 1 25224 25931
YP_008059918.1 NC_021334_p17 hypothetical protein singleton unknown function unknown function -1 8661 8885
YP_008059981.1 NC_021334_p80 portal phrog_104 portal protein head and packaging -1 49740 51161
YP_008059927.1 NC_021334_p26 WhiB family regulatory protein phrog_472 WhiB transcriptional factor transcription regulation -1 13410 13643
YP_008059912.1 NC_021334_p11 hypothetical protein singleton unknown function unknown function 1 5832 6020
YP_008059954.1 NC_021334_p53 hypothetical protein phrog_1172 unknown function unknown function -1 28499 28639
YP_008059903.1 NC_021334_p2 hypothetical protein phrog_8053 unknown function unknown function -1 694 918
YP_008059967.1 NC_021334_p66 hypothetical protein singleton unknown function unknown function 1 39819 42185
YP_008059980.1 NC_021334_p79 hypothetical protein phrog_193 head maturation protease head and packaging -1 49031 49582
YP_008059909.1 NC_021334_p8 HtrL_YibB protein phrog_8604 unknown function unknown function -1 4217 4819
YP_008059913.1 NC_021334_p12 hypothetical protein phrog_6727 unknown function unknown function -1 6531 6716
YP_008059963.1 NC_021334_p62 structural protein phrog_746 minor tail protein tail -1 33660 35447
YP_008059936.1 NC_021334_p35 hypothetical protein phrog_2025 unknown function unknown function -1 17838 18161
YP_008059947.1 NC_021334_p46 hypothetical protein phrog_1791 unknown function unknown function -1 23928 24161
YP_008059977.1 NC_021334_p76 hypothetical protein phrog_137 head-tail adaptor Ad1 connector -1 47061 47432
YP_008059933.1 NC_021334_p32 hypothetical protein singleton unknown function unknown function 1 15379 16041
YP_008059953.1 NC_021334_p52 hypothetical protein phrog_747 unknown function unknown function -1 28195 28428
YP_008059944.1 NC_021334_p43 hypothetical protein phrog_5648 unknown function unknown function 1 23014 23250
YP_008059943.1 NC_021334_p42 hypothetical protein singleton unknown function unknown function 1 21960 22634
YP_008059945.1 NC_021334_p44 hypothetical protein phrog_2437 unknown function unknown function 1 23250 23417
YP_008059962.1 NC_021334_p61 hypothetical protein singleton unknown function unknown function 1 32291 33682
YP_008059938.1 NC_021334_p37 hypothetical protein singleton unknown function unknown function -1 18907 19506