| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_021334 |
Definition |
Mycobacterium phage WIVsmall, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Cheoctovirus; unclassified Cheoctovirus. |
DB of origin |
REFSEQ |
Length |
53359 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
83 |
%GC |
61 |
Number of singletons |
11 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_008059952.1 | NC_021334_p51 | LysA | phrog_700 | endolysin | lysis | -1 | 26921 | 28198 |
| YP_008059916.1 | NC_021334_p15 | hypothetical protein | phrog_2131 | unknown function | unknown function | -1 | 7444 | 7932 |
| YP_008059971.1 | NC_021334_p70 | HNH endonuclease | phrog_3593 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 43472 | 44011 |
| YP_008059959.1 | NC_021334_p58 | hypothetical protein | phrog_644 | unknown function | unknown function | -1 | 30830 | 31282 |
| YP_008059922.1 | NC_021334_p21 | hypothetical protein | phrog_3290 | single strand annealing protein | DNA, RNA and nucleotide metabolism | -1 | 11238 | 11816 |
| YP_008059940.1 | NC_021334_p39 | DNA-binding protein | phrog_3949 | transcriptional repressor | transcription regulation | 1 | 20218 | 20721 |
| YP_008059929.1 | NC_021334_p28 | WhiB family regulatory protein | phrog_1333 | unknown function | unknown function | -1 | 14174 | 14668 |
| YP_008059932.1 | NC_021334_p31 | hypothetical protein | phrog_3416 | unknown function | unknown function | -1 | 15369 | 16169 |
| YP_008059910.1 | NC_021334_p9 | hypothetical protein | phrog_908 | unknown function | unknown function | -1 | 4816 | 5496 |
| YP_008059956.1 | NC_021334_p55 | hypothetical protein | phrog_411 | unknown function | unknown function | -1 | 28792 | 29088 |
| YP_008059972.1 | NC_021334_p71 | hypothetical protein | phrog_15976 | tail assembly chaperone | tail | -1 | 44035 | 44538 |
| YP_008059906.1 | NC_021334_p5 | hypothetical protein | phrog_1385 | unknown function | unknown function | -1 | 2820 | 3029 |
| YP_008059931.1 | NC_021334_p30 | hypothetical protein | phrog_1849 | unknown function | unknown function | -1 | 15012 | 15290 |
| YP_008059905.1 | NC_021334_p4 | glycosyltransferase | phrog_1579 | glycosyltransferase | moron, auxiliary metabolic gene and host takeover | -1 | 1204 | 2823 |
| YP_008059930.1 | NC_021334_p29 | hypothetical protein | phrog_658 | unknown function | unknown function | -1 | 14668 | 15015 |
| YP_008059902.1 | NC_021334_p1 | glycosyltransferase | phrog_854 | glucosyltransferase | moron, auxiliary metabolic gene and host takeover | -1 | 83 | 697 |
| YP_008059968.1 | NC_021334_p67 | tape-measure protein | phrog_1942 | tail length tape measure protein | tail | -1 | 39834 | 43472 |
| YP_008059951.1 | NC_021334_p50 | LysB | phrog_102 | endolysin | lysis | -1 | 25920 | 26921 |
| YP_008059908.1 | NC_021334_p7 | GIY-YIG nuclease | phrog_1869 | unknown function | unknown function | -1 | 3866 | 4030 |
| YP_008059925.1 | NC_021334_p24 | hypothetical protein | phrog_1834 | unknown function | unknown function | -1 | 12663 | 12893 |
| YP_008059934.1 | NC_021334_p33 | hypothetical protein | phrog_1797 | unknown function | unknown function | -1 | 16199 | 16765 |
| YP_008059917.1 | NC_021334_p16 | hypothetical protein | phrog_1573 | DNA methyltransferase | other | -1 | 8063 | 8470 |
| YP_008059975.1 | NC_021334_p74 | hypothetical protein | phrog_813 | head-tail adaptor | connector | -1 | 46008 | 46412 |
| YP_008059920.1 | NC_021334_p19 | hypothetical protein | phrog_2704 | unknown function | unknown function | -1 | 10632 | 10778 |
| YP_008059976.1 | NC_021334_p75 | hypothetical protein | singleton | unknown function | unknown function | -1 | 46402 | 46626 |
| YP_008059979.1 | NC_021334_p78 | hypothetical protein | phrog_4638 | head scaffolding protein | head and packaging | -1 | 48416 | 48952 |
| YP_008059924.1 | NC_021334_p23 | hypothetical protein | phrog_2060 | DNA methyltransferase | other | -1 | 12292 | 12666 |
| YP_008059950.1 | NC_021334_p49 | hypothetical protein | phrog_404 | minor tail protein | tail | -1 | 25299 | 25673 |
| YP_008059955.1 | NC_021334_p54 | hypothetical protein | phrog_932 | unknown function | unknown function | -1 | 28636 | 28785 |
| YP_008059911.1 | NC_021334_p10 | hypothetical protein | phrog_2247 | unknown function | unknown function | -1 | 5499 | 5795 |
| YP_008059983.1 | NC_021334_p82 | hypothetical protein | phrog_4479 | terminase small subunit | head and packaging | -1 | 52661 | 52915 |
| YP_008059984.1 | NC_021334_p83 | HNH endonuclease | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 52988 | 53320 |
| YP_008059946.1 | NC_021334_p45 | hypothetical protein | phrog_5648 | unknown function | unknown function | 1 | 23399 | 23758 |
| YP_008059941.1 | NC_021334_p40 | Pin protein | phrog_1948 | unknown function | unknown function | 1 | 20984 | 21430 |
| YP_008059982.1 | NC_021334_p81 | terminase | phrog_2 | terminase large subunit | head and packaging | -1 | 51202 | 52689 |
| YP_008059960.1 | NC_021334_p59 | hypothetical protein | phrog_6374 | unknown function | unknown function | -1 | 31299 | 31745 |
| YP_008059961.1 | NC_021334_p60 | structural protein | phrog_356 | minor tail protein | tail | -1 | 31468 | 33264 |
| YP_008059937.1 | NC_021334_p36 | hypothetical protein | phrog_5931 | unknown function | unknown function | -1 | 18076 | 18891 |
| YP_008059919.1 | NC_021334_p18 | hypothetical protein | phrog_3171 | replication initiation protein | DNA, RNA and nucleotide metabolism | -1 | 9301 | 10263 |
| YP_008059978.1 | NC_021334_p77 | major capsid subunit | phrog_10 | major head protein | head and packaging | -1 | 47445 | 48353 |
| YP_008059942.1 | NC_021334_p41 | intergrase | phrog_1 | integrase | integration and excision | -1 | 21522 | 22640 |
| YP_008059957.1 | NC_021334_p56 | hypothetical protein | phrog_754 | minor tail protein | tail | -1 | 29452 | 30291 |
| YP_008059970.1 | NC_021334_p69 | hypothetical protein | singleton | unknown function | unknown function | 1 | 42931 | 43464 |
| YP_008059921.1 | NC_021334_p20 | hypothetical protein | phrog_6573 | unknown function | unknown function | -1 | 10778 | 10882 |
| YP_008059966.1 | NC_021334_p65 | structural protein | phrog_106 | minor tail protein | tail | -1 | 38124 | 39833 |
| YP_008059939.1 | NC_021334_p38 | helix-turn-helix XRE-family like protein | phrog_6267 | transcriptional repressor | transcription regulation | -1 | 19729 | 20034 |
| YP_008059969.1 | NC_021334_p68 | hypothetical protein | singleton | unknown function | unknown function | 1 | 42040 | 42633 |
| YP_008059973.1 | NC_021334_p72 | hypothetical protein | phrog_621 | tail assembly chaperone | tail | -1 | 44420 | 44971 |
| YP_008059904.1 | NC_021334_p3 | hypothetical protein | phrog_1693 | unknown function | unknown function | -1 | 989 | 1201 |
| YP_008059958.1 | NC_021334_p57 | hypothetical protein | phrog_2012 | minor tail protein | tail | -1 | 30288 | 30815 |
| YP_008059928.1 | NC_021334_p27 | hypothetical protein | phrog_2096 | unknown function | unknown function | -1 | 13692 | 14129 |
| YP_008059965.1 | NC_021334_p64 | structural protein | phrog_110 | minor tail protein | tail | -1 | 36332 | 38065 |
| YP_008059926.1 | NC_021334_p25 | LuxR-like protein | phrog_664 | DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 13048 | 13413 |
| YP_008059907.1 | NC_021334_p6 | hypothetical protein | phrog_1186 | unknown function | unknown function | -1 | 3059 | 3460 |
| YP_008059923.1 | NC_021334_p22 | HNH endonuclease | phrog_826 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 11813 | 12295 |
| YP_008059915.1 | NC_021334_p14 | hypothetical protein | phrog_2939 | unknown function | unknown function | -1 | 7158 | 7385 |
| YP_008059964.1 | NC_021334_p63 | tail protein | phrog_732 | minor tail protein | tail | -1 | 35444 | 36289 |
| YP_008059914.1 | NC_021334_p13 | hypothetical protein | phrog_1900 | mobile element MPME | moron, auxiliary metabolic gene and host takeover | -1 | 6719 | 7075 |
| YP_008059948.1 | NC_021334_p47 | 3'-5' exonuclease | phrog_403 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | -1 | 24234 | 25055 |
| YP_008059935.1 | NC_021334_p34 | pyocin activator protein | phrog_1840 | excisionase | integration and excision | -1 | 17489 | 17746 |
| YP_008059974.1 | NC_021334_p73 | hypothetical protein | phrog_476 | major tail protein | tail | -1 | 45090 | 45899 |
| YP_008059949.1 | NC_021334_p48 | hypothetical protein | singleton | unknown function | unknown function | 1 | 25224 | 25931 |
| YP_008059918.1 | NC_021334_p17 | hypothetical protein | singleton | unknown function | unknown function | -1 | 8661 | 8885 |
| YP_008059981.1 | NC_021334_p80 | portal | phrog_104 | portal protein | head and packaging | -1 | 49740 | 51161 |
| YP_008059927.1 | NC_021334_p26 | WhiB family regulatory protein | phrog_472 | WhiB transcriptional factor | transcription regulation | -1 | 13410 | 13643 |
| YP_008059912.1 | NC_021334_p11 | hypothetical protein | singleton | unknown function | unknown function | 1 | 5832 | 6020 |
| YP_008059954.1 | NC_021334_p53 | hypothetical protein | phrog_1172 | unknown function | unknown function | -1 | 28499 | 28639 |
| YP_008059903.1 | NC_021334_p2 | hypothetical protein | phrog_8053 | unknown function | unknown function | -1 | 694 | 918 |
| YP_008059967.1 | NC_021334_p66 | hypothetical protein | singleton | unknown function | unknown function | 1 | 39819 | 42185 |
| YP_008059980.1 | NC_021334_p79 | hypothetical protein | phrog_193 | head maturation protease | head and packaging | -1 | 49031 | 49582 |
| YP_008059909.1 | NC_021334_p8 | HtrL_YibB protein | phrog_8604 | unknown function | unknown function | -1 | 4217 | 4819 |
| YP_008059913.1 | NC_021334_p12 | hypothetical protein | phrog_6727 | unknown function | unknown function | -1 | 6531 | 6716 |
| YP_008059963.1 | NC_021334_p62 | structural protein | phrog_746 | minor tail protein | tail | -1 | 33660 | 35447 |
| YP_008059936.1 | NC_021334_p35 | hypothetical protein | phrog_2025 | unknown function | unknown function | -1 | 17838 | 18161 |
| YP_008059947.1 | NC_021334_p46 | hypothetical protein | phrog_1791 | unknown function | unknown function | -1 | 23928 | 24161 |
| YP_008059977.1 | NC_021334_p76 | hypothetical protein | phrog_137 | head-tail adaptor Ad1 | connector | -1 | 47061 | 47432 |
| YP_008059933.1 | NC_021334_p32 | hypothetical protein | singleton | unknown function | unknown function | 1 | 15379 | 16041 |
| YP_008059953.1 | NC_021334_p52 | hypothetical protein | phrog_747 | unknown function | unknown function | -1 | 28195 | 28428 |
| YP_008059944.1 | NC_021334_p43 | hypothetical protein | phrog_5648 | unknown function | unknown function | 1 | 23014 | 23250 |
| YP_008059943.1 | NC_021334_p42 | hypothetical protein | singleton | unknown function | unknown function | 1 | 21960 | 22634 |
| YP_008059945.1 | NC_021334_p44 | hypothetical protein | phrog_2437 | unknown function | unknown function | 1 | 23250 | 23417 |
| YP_008059962.1 | NC_021334_p61 | hypothetical protein | singleton | unknown function | unknown function | 1 | 32291 | 33682 |
| YP_008059938.1 | NC_021334_p37 | hypothetical protein | singleton | unknown function | unknown function | -1 | 18907 | 19506 |