| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_021337 |
Definition |
Acinetobacter phage AB3, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Beijerinckvirinae; Friunavirus. |
DB of origin |
REFSEQ |
Length |
31185 |
Host Name |
Acinetobacter baumannii |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
29 |
%GC |
39.17 |
Number of singletons |
2 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_008060143.1 | NC_021337_p12 | capsid protein | phrog_267 | major head protein | head and packaging | -1 | 15497 | 16528 |
| YP_008060141.1 | NC_021337_p10 | tail tubular protein A | phrog_446 | tail protein | tail | -1 | 14493 | 15119 |
| YP_008060159.1 | NC_021337_p28 | ATP-dependent DNA ligase | phrog_114 | ATP-dependent DNA ligase | DNA, RNA and nucleotide metabolism | -1 | 29814 | 30800 |
| YP_008060135.1 | NC_021337_p4 | holin | phrog_126 | holin/anti-holin | lysis | -1 | 2339 | 2674 |
| YP_008060153.1 | NC_021337_p22 | hypothetical protein | phrog_1614 | nucleotidyltransferase | DNA, RNA and nucleotide metabolism | -1 | 23979 | 24335 |
| YP_008060157.1 | NC_021337_p26 | hypothetical protein | phrog_32097 | unknown function | unknown function | -1 | 26886 | 27125 |
| YP_008060144.1 | NC_021337_p13 | scaffolding protein | phrog_1018 | head scaffolding protein | head and packaging | -1 | 16544 | 17404 |
| YP_008060134.1 | NC_021337_p3 | chitinase | singleton | unknown function | unknown function | -1 | 1795 | 2160 |
| YP_008060152.1 | NC_021337_p21 | hypothetical protein | phrog_1614 | nucleotidyltransferase | DNA, RNA and nucleotide metabolism | -1 | 23979 | 24548 |
| YP_008060148.1 | NC_021337_p17 | RNA polymerase | phrog_414 | RNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 19527 | 21944 |
| YP_008060155.1 | NC_021337_p24 | hypothetical protein | phrog_5437 | unknown function | unknown function | -1 | 25484 | 25819 |
| YP_008060138.1 | NC_021337_p7 | hypothetical protein | phrog_2083 | internal virion lysozyme motif | head and packaging | -1 | 8621 | 11506 |
| YP_008060154.1 | NC_021337_p23 | DNA exonuclease | phrog_107 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 24538 | 25440 |
| YP_008060140.1 | NC_021337_p9 | tail tubular protein B | phrog_457 | tail protein | tail | -1 | 12193 | 14484 |
| YP_008060158.1 | NC_021337_p27 | DNA polymerase | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 27115 | 29448 |
| YP_008060133.1 | NC_021337_p2 | endolysin | phrog_181 | endolysin | lysis | -1 | 1795 | 2352 |
| YP_008060150.1 | NC_021337_p19 | hypothetical protein | phrog_221 | metallo-phosphoesterase | other | -1 | 22603 | 23538 |
| YP_008060149.1 | NC_021337_p18 | dNMP kinase | phrog_139 | deoxynucleoside monophosphate kinase | other | -1 | 21953 | 22603 |
| YP_008060136.1 | NC_021337_p5 | hypothetical protein | phrog_23909 | tail fiber protein | tail | -1 | 2951 | 5506 |
| YP_008060132.1 | NC_021337_p1 | DNA maturase | phrog_891 | terminase small subunit | head and packaging | -1 | 1478 | 1786 |
| YP_008060142.1 | NC_021337_p11 | hypothetical protein | phrog_6633 | tail protein | tail | -1 | 15256 | 15441 |
| YP_008060139.1 | NC_021337_p8 | internal virion protein B | phrog_6056 | internal virion protein | head and packaging | -1 | 11519 | 12193 |
| YP_008060151.1 | NC_021337_p20 | DNA endonuclease VII | phrog_423 | endonuclease VII | DNA, RNA and nucleotide metabolism | -1 | 23542 | 23982 |
| YP_008060145.1 | NC_021337_p14 | head-tail connector protein | phrog_449 | head-tail adaptor | connector | -1 | 17413 | 18969 |
| YP_008060137.1 | NC_021337_p6 | hypothetical protein | phrog_342 | internal virion protein with endolysin domain | head and packaging | -1 | 5513 | 8611 |
| YP_008060147.1 | NC_021337_p16 | hypothetical protein | phrog_5394 | unknown function | unknown function | -1 | 19226 | 19423 |
| YP_008060156.1 | NC_021337_p25 | hypothetical protein | phrog_862 | unknown function | unknown function | -1 | 25992 | 26882 |
| YP_008060146.1 | NC_021337_p15 | structural protein | phrog_4893 | unknown function | unknown function | -1 | 18978 | 19229 |
| YP_008060160.1 | NC_021337_p29 | DNA helicase | singleton | unknown function | unknown function | -1 | 30797 | 31162 |