Genomic map of Streptomyces phage Zemlya (NC_021339)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_021339
Definition
Streptomyces phage Zemlya, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Arquatrovirinae; Likavirus.
DB of origin
REFSEQ
Length
51077
Host Name
Streptomyces lividans
Host domain
Bacteria
Is prophage?
undef
Number of proteins
76
%GC
65.67
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_008060238.1 NC_021339_p5 thioredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 1664 1915
YP_008060299.1 NC_021339_p66 hypothetical protein phrog_4867 unknown function unknown function -1 45256 45612
YP_008060248.1 NC_021339_p15 hypothetical protein phrog_123 tail terminator connector 1 9554 10057
YP_008060296.1 NC_021339_p63 hypothetical protein phrog_9416 unknown function unknown function -1 44379 44654
YP_008060271.1 NC_021339_p38 hypothetical protein phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 27972 28334
YP_008060289.1 NC_021339_p56 hypothetical protein phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 41525 42043
YP_008060249.1 NC_021339_p16 hypothetical protein phrog_117 major tail protein tail 1 10074 10829
YP_008060290.1 NC_021339_p57 hypothetical protein phrog_3424 unknown function unknown function -1 42040 42273
YP_008060240.1 NC_021339_p7 terminase large subunit phrog_9 terminase large subunit head and packaging 1 2376 4022
YP_008060244.1 NC_021339_p11 major capsid protein phrog_283 major head protein head and packaging 1 7220 8305
YP_008060256.1 NC_021339_p23 hypothetical protein phrog_4013 unknown function unknown function 1 17368 19353
YP_008060280.1 NC_021339_p47 hypothetical protein phrog_3512 sigma factor transcription regulation 1 31668 32066
YP_008060258.1 NC_021339_p25 hypothetical protein phrog_988 tail protein tail 1 19928 21274
YP_008060237.1 NC_021339_p4 hypothetical protein phrog_3555 unknown function unknown function 1 1428 1658
YP_008060279.1 NC_021339_p46 hypothetical protein phrog_1340 unknown function unknown function 1 31315 31671
YP_008060282.1 NC_021339_p49 ribonucleotide reductase phrog_367 ribonucleotide reductase DNA, RNA and nucleotide metabolism 1 32513 34603
YP_008060264.1 NC_021339_p31 hypothetical protein phrog_5250 unknown function unknown function 1 24001 24303
YP_008060273.1 NC_021339_p40 DNA primase phrog_360 DNA primase DNA, RNA and nucleotide metabolism 1 28485 28904
YP_008060259.1 NC_021339_p26 hypothetical protein phrog_3534 unknown function unknown function 1 21274 21627
YP_008060254.1 NC_021339_p21 hypothetical protein phrog_538 minor tail protein tail 1 15855 17066
YP_008060304.1 NC_021339_p71 hypothetical protein phrog_2355 unknown function unknown function -1 47384 47803
YP_008060306.1 NC_021339_p73 hypothetical protein phrog_4313 unknown function unknown function -1 48037 49014
YP_008060278.1 NC_021339_p45 hypothetical protein phrog_284 exonuclease DNA, RNA and nucleotide metabolism 1 30098 31288
YP_008060277.1 NC_021339_p44 hypothetical protein phrog_3979 unknown function unknown function 1 29887 30105
YP_008060307.1 NC_021339_p74 hypothetical protein phrog_3994 unknown function unknown function -1 49135 49611
YP_008060263.1 NC_021339_p30 immunity repressor phrog_3929 transcriptional repressor transcription regulation 1 23412 23864
YP_008060276.1 NC_021339_p43 hypothetical protein phrog_6217 unknown function unknown function 1 29732 29890
YP_008060284.1 NC_021339_p51 serine integrase phrog_95 integrase integration and excision 1 35100 36743
YP_008060308.1 NC_021339_p75 hypothetical protein phrog_4485 unknown function unknown function -1 49655 49774
YP_008060287.1 NC_021339_p54 hypothetical protein phrog_5971 unknown function unknown function -1 37838 37990
YP_008060286.1 NC_021339_p53 hypothetical protein phrog_4071 unknown function unknown function -1 37563 37835
YP_008060305.1 NC_021339_p72 hypothetical protein phrog_4275 unknown function unknown function -1 47817 47942
YP_008060247.1 NC_021339_p14 hypothetical protein phrog_321 tail completion or Neck1 protein connector 1 9156 9554
YP_008060292.1 NC_021339_p59 hypothetical protein phrog_4024 unknown function unknown function -1 42800 43213
YP_008060267.1 NC_021339_p34 hypothetical protein phrog_8950 unknown function unknown function 1 25913 26059
YP_008060266.1 NC_021339_p33 hypothetical protein phrog_3912 unknown function unknown function 1 25392 25916
YP_008060235.1 NC_021339_p2 HNH endonuclease phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 703 1014
YP_008060303.1 NC_021339_p70 hypothetical protein phrog_4239 unknown function unknown function -1 46848 47258
YP_008060285.1 NC_021339_p52 hypothetical protein phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism -1 36853 37566
YP_008060301.1 NC_021339_p68 HNH domain protein phrog_4842 HNH endonuclease DNA, RNA and nucleotide metabolism -1 46085 46540
YP_008060288.1 NC_021339_p55 DNA polymerase III subunit alpha phrog_405 DNA polymerase DNA, RNA and nucleotide metabolism -1 38030 41509
YP_008060260.1 NC_021339_p27 hypothetical protein phrog_1493 endolysin lysis 1 21653 22741
YP_008060245.1 NC_021339_p12 hypothetical protein phrog_137 head-tail adaptor Ad1 connector 1 8375 8824
YP_008060241.1 NC_021339_p8 portal protein phrog_104 portal protein head and packaging 1 4055 5491
YP_008060251.1 NC_021339_p18 tail assembly chaperone phrog_330 tail assembly chaperone tail 1 10950 11273
YP_008060268.1 NC_021339_p35 hypothetical protein phrog_1288 unknown function unknown function 1 26104 26541
YP_008060309.1 NC_021339_p76 hypothetical protein phrog_2563 unknown function unknown function -1 49872 50282
YP_008060270.1 NC_021339_p37 DnaB-like helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 27028 27903
YP_008060252.1 NC_021339_p19 tape measure phrog_305 tail length tape measure protein tail 1 11666 14989
YP_008060298.1 NC_021339_p65 hypothetical protein phrog_4785 unknown function unknown function -1 44911 45171
YP_008060253.1 NC_021339_p20 hypothetical protein phrog_33 distal tail protein Dit tail 1 14993 15850
YP_008060295.1 NC_021339_p62 hypothetical protein phrog_3991 unknown function unknown function -1 44140 44382
YP_008060262.1 NC_021339_p29 hypothetical protein phrog_4061 unknown function unknown function -1 23062 23325
YP_008060283.1 NC_021339_p50 Lsr2-like protein phrog_6509 Lsr2-like DNA bridging protein DNA, RNA and nucleotide metabolism 1 34650 34880
YP_008060255.1 NC_021339_p22 hypothetical protein phrog_1276 unknown function unknown function 1 17070 17366
YP_008060281.1 NC_021339_p48 hypothetical protein phrog_4123 unknown function unknown function 1 32063 32416
YP_008060239.1 NC_021339_p6 hypothetical protein phrog_226 minor tail protein tail 1 1930 2355
YP_008060265.1 NC_021339_p32 hypothetical protein phrog_466 exonuclease DNA, RNA and nucleotide metabolism 1 24300 25271
YP_008060246.1 NC_021339_p13 hypothetical protein phrog_320 head closure Hc1 connector 1 8821 9156
YP_008060275.1 NC_021339_p42 hypothetical protein phrog_4022 unknown function unknown function 1 29400 29735
YP_008060291.1 NC_021339_p58 hypothetical protein phrog_3965 unknown function unknown function -1 42285 42716
YP_008060293.1 NC_021339_p60 dNMP kinase phrog_139 deoxynucleoside monophosphate kinase other -1 43254 43841
YP_008060234.1 NC_021339_p1 hypothetical protein phrog_4207 unknown function unknown function -1 91 297
YP_008060294.1 NC_021339_p61 hypothetical protein phrog_5209 unknown function unknown function -1 43838 44143
YP_008060236.1 NC_021339_p3 hypothetical protein phrog_18964 unknown function unknown function 1 1171 1350
YP_008060250.1 NC_021339_p17 tail assembly chaperone phrog_978 tail assembly chaperone tail 1 10950 11662
YP_008060257.1 NC_021339_p24 hypothetical protein phrog_4817 unknown function unknown function 1 19353 19853
YP_008060242.1 NC_021339_p9 hypothetical protein phrog_193 head maturation protease head and packaging 1 5488 6600
YP_008060302.1 NC_021339_p69 hypothetical protein phrog_3908 unknown function unknown function -1 46643 46846
YP_008060272.1 NC_021339_p39 hypothetical protein phrog_4673 unknown function unknown function 1 28331 28483
YP_008060274.1 NC_021339_p41 DNA primase phrog_849 DNA primase DNA, RNA and nucleotide metabolism 1 28738 29403
YP_008060300.1 NC_021339_p67 hypothetical protein phrog_586 unknown function unknown function -1 45627 45998
YP_008060243.1 NC_021339_p10 scaffold protein phrog_233 head scaffolding protein head and packaging 1 6604 7149
YP_008060269.1 NC_021339_p36 dCMP deaminase phrog_174 dCMP deaminase DNA, RNA and nucleotide metabolism 1 26609 27091
YP_008060261.1 NC_021339_p28 hypothetical protein phrog_4092 unknown function unknown function 1 22738 23007
YP_008060297.1 NC_021339_p64 hypothetical protein phrog_9778 unknown function unknown function -1 44738 44914