| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_021532 |
Definition |
Alteromonas phage vB_AmaP_AD45-P1, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae. |
DB of origin |
REFSEQ |
Length |
103910 |
Host Name |
Alteromonas macleodii |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
120 |
%GC |
43.15 |
Number of singletons |
6 |
Number of paralogs |
2 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_008126049.1 | NC_021532_p78 | hypothetical protein | phrog_19342 | unknown function | unknown function | 1 | 59970 | 60740 |
| YP_008126070.1 | NC_021532_p99 | thioredoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 72326 | 72571 |
| YP_008125994.1 | NC_021532_p23 | hypothetical protein | phrog_38 | terminase large subunit | head and packaging | -1 | 29793 | 31355 |
| YP_008126066.1 | NC_021532_p95 | hypothetical protein | phrog_25077 | unknown function | unknown function | 1 | 69783 | 70049 |
| YP_008126046.1 | NC_021532_p75 | hypothetical protein | phrog_19342 | unknown function | unknown function | 1 | 58770 | 59258 |
| YP_008126030.1 | NC_021532_p59 | hypothetical protein | phrog_26871 | unknown function | unknown function | 1 | 52235 | 52480 |
| YP_008126059.1 | NC_021532_p88 | hypothetical protein | phrog_3205 | unknown function | unknown function | 1 | 65671 | 66222 |
| YP_008125982.1 | NC_021532_p11 | hypothetical protein | phrog_2120 | tail length tape measure protein | tail | -1 | 14178 | 15422 |
| YP_008126037.1 | NC_021532_p66 | hypothetical protein | phrog_26229 | unknown function | unknown function | 1 | 55648 | 56097 |
| YP_008126058.1 | NC_021532_p87 | hypothetical protein | phrog_18067 | unknown function | unknown function | 1 | 65319 | 65684 |
| YP_008126029.1 | NC_021532_p58 | hypothetical protein | phrog_1761 | unknown function | unknown function | 1 | 51667 | 51849 |
| YP_008126039.1 | NC_021532_p68 | hypothetical protein | phrog_26801 | unknown function | unknown function | 1 | 56438 | 56803 |
| YP_008125981.1 | NC_021532_p10 | major coat protein | phrog_1357 | major head protein | head and packaging | -1 | 13210 | 14124 |
| YP_008126075.1 | NC_021532_p104 | hypothetical protein | phrog_26880 | unknown function | unknown function | 1 | 78703 | 78903 |
| YP_008126085.1 | NC_021532_p114 | hypothetical protein | phrog_86 | ribonucleoside diphosphate reductase small subunit | DNA, RNA and nucleotide metabolism | 1 | 87754 | 88683 |
| YP_008126089.1 | NC_021532_p118 | hypothetical protein | phrog_26075 | unknown function | unknown function | 1 | 90206 | 90481 |
| YP_008126079.1 | NC_021532_p108 | hypothetical protein | phrog_25666 | unknown function | unknown function | 1 | 80683 | 81576 |
| YP_008126033.1 | NC_021532_p62 | hypothetical protein | singleton | unknown function | unknown function | 1 | 54216 | 54518 |
| YP_008126042.1 | NC_021532_p71 | hypothetical protein | phrog_27788 | unknown function | unknown function | 1 | 57538 | 57804 |
| YP_008126005.1 | NC_021532_p34 | hypothetical protein | phrog_22828 | unknown function | unknown function | 1 | 36119 | 36385 |
| YP_008126061.1 | NC_021532_p90 | thymidylate synthase | phrog_23580 | thymidylate synthase | DNA, RNA and nucleotide metabolism | 1 | 66479 | 67015 |
| YP_008126068.1 | NC_021532_p97 | hypothetical protein | phrog_7111 | unknown function | unknown function | 1 | 71236 | 71823 |
| YP_008126084.1 | NC_021532_p113 | ribonucleotide-diphosphate reductase subunit alpha | phrog_84 | ribonucleoside-diphosphate reductase large subunit | DNA, RNA and nucleotide metabolism | 1 | 86026 | 87747 |
| YP_008126051.1 | NC_021532_p80 | hypothetical protein | phrog_23483 | unknown function | unknown function | 1 | 61504 | 61719 |
| YP_008126087.1 | NC_021532_p116 | hypothetical protein | phrog_94 | head maturation protease | head and packaging | 1 | 89044 | 89637 |
| YP_008126016.1 | NC_021532_p45 | hypothetical protein | phrog_25881 | unknown function | unknown function | 1 | 41230 | 41484 |
| YP_008126040.1 | NC_021532_p69 | hypothetical protein | phrog_24049 | unknown function | unknown function | 1 | 56763 | 57212 |
| YP_008126006.1 | NC_021532_p35 | hypothetical protein | phrog_25439 | unknown function | unknown function | 1 | 36385 | 36714 |
| YP_008125972.1 | NC_021532_p1 | hypothetical protein | phrog_22860 | unknown function | unknown function | -1 | 1 | 1117 |
| YP_008126000.1 | NC_021532_p29 | hypothetical protein | phrog_26839 | unknown function | unknown function | -1 | 33912 | 34247 |
| YP_008125991.1 | NC_021532_p20 | hypothetical protein | phrog_27370 | unknown function | unknown function | -1 | 20762 | 25399 |
| YP_008126007.1 | NC_021532_p36 | hypothetical protein | phrog_22654 | unknown function | unknown function | 1 | 36744 | 37376 |
| YP_008126086.1 | NC_021532_p115 | hypothetical protein | phrog_474 | phosphofructokinase | other | 1 | 88755 | 89051 |
| YP_008126014.1 | NC_021532_p43 | hypothetical protein | phrog_25911 | unknown function | unknown function | 1 | 40197 | 40448 |
| YP_008126071.1 | NC_021532_p100 | hypothetical protein | phrog_2135 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 72593 | 74854 |
| YP_008126024.1 | NC_021532_p53 | hypothetical protein | phrog_1735 | unknown function | unknown function | 1 | 47792 | 49801 |
| YP_008126038.1 | NC_021532_p67 | hypothetical protein | singleton | unknown function | unknown function | 1 | 56101 | 56445 |
| YP_008126056.1 | NC_021532_p85 | hypothetical protein | phrog_3427 | holin | lysis | -1 | 64225 | 64674 |
| YP_008126065.1 | NC_021532_p94 | HflC/HflK family inner membrane lipoprotein | phrog_200 | lipoprotein | other | 1 | 68862 | 69716 |
| YP_008126032.1 | NC_021532_p61 | hypothetical protein | phrog_21276 | unknown function | unknown function | 1 | 53724 | 54122 |
| YP_008126052.1 | NC_021532_p81 | hypothetical protein | phrog_23300 | unknown function | unknown function | 1 | 61719 | 62180 |
| YP_008126044.1 | NC_021532_p73 | hypothetical protein | phrog_22712 | unknown function | unknown function | 1 | 58255 | 58569 |
| YP_008126017.1 | NC_021532_p46 | hypothetical protein | phrog_22493 | unknown function | unknown function | 1 | 41542 | 42372 |
| YP_008125973.1 | NC_021532_p2 | hypothetical protein | phrog_26112 | unknown function | unknown function | -1 | 1127 | 1627 |
| YP_008126045.1 | NC_021532_p74 | hypothetical protein | phrog_22854 | unknown function | unknown function | 1 | 58572 | 58760 |
| YP_008126074.1 | NC_021532_p103 | hypothetical protein | phrog_2872 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 78128 | 78589 |
| YP_008126012.1 | NC_021532_p41 | hypothetical protein | phrog_22535 | unknown function | unknown function | 1 | 39272 | 39922 |
| YP_008125977.1 | NC_021532_p6 | tail protein Pb4 | phrog_23593 | tail protein | tail | -1 | 5296 | 11901 |
| YP_008125987.1 | NC_021532_p16 | hypothetical protein | phrog_25886 | unknown function | unknown function | -1 | 18765 | 19097 |
| YP_008126043.1 | NC_021532_p72 | hypothetical protein | phrog_27906 | unknown function | unknown function | 1 | 57974 | 58258 |
| YP_008126015.1 | NC_021532_p44 | hypothetical protein | phrog_27203 | unknown function | unknown function | 1 | 40472 | 41215 |
| YP_008125980.1 | NC_021532_p9 | major coat protein | singleton | unknown function | unknown function | -1 | 12980 | 13213 |
| YP_008125974.1 | NC_021532_p3 | hypothetical protein | phrog_25216 | unknown function | unknown function | -1 | 1691 | 3601 |
| YP_008126060.1 | NC_021532_p89 | hypothetical protein | phrog_27004 | unknown function | unknown function | 1 | 66232 | 66489 |
| YP_008126067.1 | NC_021532_p96 | DNA ligase | phrog_114 | ATP-dependent DNA ligase | DNA, RNA and nucleotide metabolism | 1 | 70033 | 71163 |
| YP_008126053.1 | NC_021532_p82 | hypothetical protein | phrog_25350 | unknown function | unknown function | 1 | 62720 | 63193 |
| YP_008126062.1 | NC_021532_p91 | hypothetical protein | phrog_19902 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 67082 | 67747 |
| YP_008126025.1 | NC_021532_p54 | hypothetical protein | phrog_2018 | unknown function | unknown function | 1 | 49811 | 50194 |
| YP_008126057.1 | NC_021532_p86 | hypothetical protein | phrog_139 | deoxynucleoside monophosphate kinase | other | 1 | 64735 | 65319 |
| YP_008125979.1 | NC_021532_p8 | hypothetical protein | phrog_2130 | unknown function | unknown function | -1 | 12322 | 12843 |
| YP_008126004.1 | NC_021532_p33 | hypothetical protein | phrog_26513 | unknown function | unknown function | 1 | 35862 | 36116 |
| YP_008125992.1 | NC_021532_p21 | tail fiber | phrog_22284 | tail fiber protein | tail | -1 | 25408 | 29118 |
| YP_008125978.1 | NC_021532_p7 | hypothetical protein | phrog_1084 | unknown function | unknown function | -1 | 11891 | 12262 |
| YP_008125975.1 | NC_021532_p4 | hypothetical protein | phrog_22937 | unknown function | unknown function | -1 | 3601 | 4479 |
| YP_008126003.1 | NC_021532_p32 | hypothetical protein | phrog_27018 | unknown function | unknown function | 1 | 35618 | 35836 |
| YP_008125984.1 | NC_021532_p13 | hypothetical protein | phrog_22442 | unknown function | unknown function | -1 | 15986 | 16261 |
| YP_008125995.1 | NC_021532_p24 | hypothetical protein | phrog_2109 | unknown function | unknown function | -1 | 31348 | 32073 |
| YP_008126047.1 | NC_021532_p76 | hypothetical protein | singleton | unknown function | unknown function | 1 | 59475 | 59699 |
| YP_008125986.1 | NC_021532_p15 | hypothetical protein | phrog_1216 | portal protein | head and packaging | -1 | 16731 | 18722 |
| YP_008125998.1 | NC_021532_p27 | hypothetical protein | phrog_23395 | unknown function | unknown function | -1 | 32970 | 33176 |
| YP_008126002.1 | NC_021532_p31 | hypothetical protein | phrog_22287 | unknown function | unknown function | 1 | 35047 | 35280 |
| YP_008126022.1 | NC_021532_p51 | hypothetical protein | phrog_1314 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 45137 | 46459 |
| YP_008126064.1 | NC_021532_p93 | RP thymidylate synthase | phrog_10644 | thymidylate synthase | DNA, RNA and nucleotide metabolism | 1 | 68328 | 68744 |
| YP_008126013.1 | NC_021532_p42 | hypothetical protein | phrog_22408 | unknown function | unknown function | 1 | 39968 | 40192 |
| YP_008126054.1 | NC_021532_p83 | hypothetical protein | phrog_22822 | unknown function | unknown function | 1 | 63581 | 63826 |
| YP_008125983.1 | NC_021532_p12 | hypothetical protein | phrog_26806 | unknown function | unknown function | -1 | 15434 | 15727 |
| YP_008126020.1 | NC_021532_p49 | hypothetical protein | phrog_289 | GTP-binding domain | other | 1 | 43893 | 44321 |
| YP_008126019.1 | NC_021532_p48 | hypothetical protein | phrog_22720 | unknown function | unknown function | 1 | 43512 | 43835 |
| YP_008126050.1 | NC_021532_p79 | hypothetical protein | phrog_8828 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 60980 | 61255 |
| YP_008126036.1 | NC_021532_p65 | hypothetical protein | phrog_2638 | unknown function | unknown function | 1 | 55308 | 55637 |
| YP_008125993.1 | NC_021532_p22 | 30 kDa protein | phrog_2125 | virion structural protein | head and packaging | -1 | 29118 | 29735 |
| YP_008126055.1 | NC_021532_p84 | hypothetical protein | phrog_13761 | unknown function | unknown function | 1 | 63795 | 64247 |
| YP_008126008.1 | NC_021532_p37 | hypothetical protein | phrog_24443 | unknown function | unknown function | 1 | 37460 | 37837 |
| YP_008126091.1 | NC_021532_p120 | hypothetical protein | phrog_24526 | unknown function | unknown function | -1 | 102947 | 103910 |
| YP_008126088.1 | NC_021532_p117 | hypothetical protein | phrog_26883 | unknown function | unknown function | 1 | 89630 | 90202 |
| YP_008126023.1 | NC_021532_p52 | hypothetical protein | phrog_1297 | ATPase | other | 1 | 46456 | 47763 |
| YP_008126028.1 | NC_021532_p57 | hypothetical protein | phrog_24749 | unknown function | unknown function | 1 | 50773 | 51273 |
| YP_008126063.1 | NC_021532_p92 | homing endonuclease | phrog_314 | homing endonuclease | DNA, RNA and nucleotide metabolism | 1 | 67812 | 68279 |
| YP_008125997.1 | NC_021532_p26 | hypothetical protein | phrog_25400 | unknown function | unknown function | -1 | 32398 | 32784 |
| YP_008126021.1 | NC_021532_p50 | hypothetical protein | phrog_24473 | unknown function | unknown function | 1 | 44598 | 45125 |
| YP_008126010.1 | NC_021532_p39 | hypothetical protein | phrog_23064 | unknown function | unknown function | 1 | 38377 | 38676 |
| YP_008125989.1 | NC_021532_p18 | hypothetical protein | phrog_24079 | unknown function | unknown function | -1 | 19566 | 19961 |
| YP_008126069.1 | NC_021532_p98 | hypothetical protein | phrog_3108 | unknown function | unknown function | 1 | 71823 | 72311 |
| YP_008126031.1 | NC_021532_p60 | hypothetical protein | phrog_16814 | unknown function | unknown function | 1 | 52473 | 52691 |
| YP_008126035.1 | NC_021532_p64 | hypothetical protein | singleton | unknown function | unknown function | 1 | 54976 | 55191 |
| YP_008125990.1 | NC_021532_p19 | hypothetical protein | phrog_26746 | unknown function | unknown function | -1 | 20019 | 20762 |
| YP_008126048.1 | NC_021532_p77 | hypothetical protein | phrog_24319 | unknown function | unknown function | 1 | 59699 | 59977 |
| YP_008126072.1 | NC_021532_p101 | rIIA protein | phrog_24904 | RIIA lysis inhibitor | lysis | 1 | 74870 | 76957 |
| YP_008125988.1 | NC_021532_p17 | hypothetical protein | phrog_21153 | unknown function | unknown function | 1 | 19259 | 19513 |
| YP_008126080.1 | NC_021532_p109 | UvrD-type helicase | phrog_1967 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 81573 | 83000 |
| YP_008126009.1 | NC_021532_p38 | hypothetical protein | phrog_25708 | unknown function | unknown function | 1 | 37800 | 38093 |
| YP_008126082.1 | NC_021532_p111 | DNA polymerase | phrog_23226 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 83655 | 85490 |
| YP_008126041.1 | NC_021532_p70 | hypothetical protein | phrog_23166 | unknown function | unknown function | 1 | 57329 | 57541 |
| YP_008126076.1 | NC_021532_p105 | hypothetical protein | phrog_24910 | unknown function | unknown function | 1 | 79022 | 79531 |
| YP_008125996.1 | NC_021532_p25 | hypothetical protein | phrog_23425 | unknown function | unknown function | -1 | 32199 | 32408 |
| YP_008125976.1 | NC_021532_p5 | hypothetical protein | phrog_2050 | virion structural protein | head and packaging | -1 | 4488 | 5243 |
| YP_008126073.1 | NC_021532_p102 | hypothetical protein | phrog_69 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 77317 | 78123 |
| YP_008126026.1 | NC_021532_p55 | hypothetical protein | phrog_27645 | unknown function | unknown function | 1 | 50202 | 50489 |
| YP_008126034.1 | NC_021532_p63 | hypothetical protein | singleton | unknown function | unknown function | 1 | 54526 | 54888 |
| YP_008125985.1 | NC_021532_p14 | hypothetical protein | phrog_27798 | unknown function | unknown function | -1 | 16261 | 16731 |
| YP_008126027.1 | NC_021532_p56 | hypothetical protein | phrog_1048 | unknown function | unknown function | 1 | 50482 | 50754 |
| YP_008125999.1 | NC_021532_p28 | hypothetical protein | phrog_26392 | unknown function | unknown function | -1 | 33152 | 33847 |
| YP_008126001.1 | NC_021532_p30 | hypothetical protein | phrog_23019 | unknown function | unknown function | 1 | 34632 | 34853 |
| YP_008126077.1 | NC_021532_p106 | hypothetical protein | phrog_22761 | unknown function | unknown function | 1 | 79609 | 79833 |
| YP_008126090.1 | NC_021532_p119 | hypothetical protein | phrog_22790 | unknown function | unknown function | -1 | 102405 | 102734 |
| YP_008126078.1 | NC_021532_p107 | hypothetical protein | phrog_743 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 79903 | 80598 |
| YP_008126018.1 | NC_021532_p47 | hypothetical protein | phrog_314 | homing endonuclease | DNA, RNA and nucleotide metabolism | 1 | 42746 | 43522 |
| YP_008126083.1 | NC_021532_p112 | hypothetical protein | phrog_1682 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 85622 | 86032 |
| YP_008126081.1 | NC_021532_p110 | hypothetical protein | phrog_25155 | unknown function | unknown function | 1 | 83003 | 83674 |
| YP_008126011.1 | NC_021532_p40 | hypothetical protein | phrog_23958 | unknown function | unknown function | 1 | 38755 | 39114 |