Genomic map of Halorubrum phage CGphi46 (NC_021537)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_021537
Definition
Halorubrum phage CGphi46 genomic sequence.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
39784
Host Name
Halorubrum
Host domain
Archaea
Is prophage?
undef
Number of proteins
55
%GC
65.1
Number of singletons
25
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_008126538.1 NC_021537_p3 hypothetical protein phrog_17946 unknown function unknown function -1 1130 1519
YP_008126540.1 NC_021537_p5 hypothetical protein phrog_26743 unknown function unknown function -1 2490 3761
YP_008126550.1 NC_021537_p15 hypothetical protein singleton unknown function unknown function -1 11433 11657
YP_008126578.1 NC_021537_p43 hypothetical protein phrog_216 integrase integration and excision 1 25695 26453
YP_008126551.1 NC_021537_p16 hypothetical protein singleton unknown function unknown function -1 11849 12151
YP_008126588.1 NC_021537_p53 hypothetical protein phrog_25153 unknown function unknown function -1 38675 39202
YP_008126583.1 NC_021537_p48 hypothetical protein phrog_20675 unknown function unknown function -1 34540 35214
YP_008126559.1 NC_021537_p24 hypothetical protein singleton unknown function unknown function -1 18358 18606
YP_008126561.1 NC_021537_p26 hypothetical protein singleton unknown function unknown function -1 19022 19177
YP_008126544.1 NC_021537_p9 hypothetical protein phrog_18714 unknown function unknown function -1 8065 8382
YP_008126562.1 NC_021537_p27 hypothetical protein singleton unknown function unknown function 1 19176 19460
YP_008126568.1 NC_021537_p33 proliferating cell nuclear antigen PcnA phrog_947 DNA polymerase processivity factor DNA, RNA and nucleotide metabolism -1 21070 21816
YP_008126545.1 NC_021537_p10 hypothetical protein phrog_284 exonuclease DNA, RNA and nucleotide metabolism -1 8550 10031
YP_008126552.1 NC_021537_p17 hypothetical protein singleton unknown function unknown function -1 12245 12526
YP_008126573.1 NC_021537_p38 hypothetical protein singleton unknown function unknown function -1 23131 23304
YP_008126563.1 NC_021537_p28 hypothetical protein singleton unknown function unknown function -1 19337 19741
YP_008126546.1 NC_021537_p11 hypothetical protein phrog_27334 unknown function unknown function -1 10032 10529
YP_008126584.1 NC_021537_p49 hypothetical protein phrog_16931 unknown function unknown function 1 35273 35974
YP_008126582.1 NC_021537_p47 hypothetical protein phrog_18406 unknown function unknown function -1 33349 34536
YP_008126554.1 NC_021537_p19 hypothetical protein singleton unknown function unknown function -1 12714 12938
YP_008126547.1 NC_021537_p12 hypothetical protein singleton unknown function unknown function -1 10707 10928
YP_008126586.1 NC_021537_p51 hypothetical protein phrog_19457 unknown function unknown function -1 37229 37726
YP_008126556.1 NC_021537_p21 hypothetical protein singleton unknown function unknown function -1 13549 13782
YP_008126543.1 NC_021537_p8 hypothetical protein phrog_4102 terminase small subunit head and packaging -1 7521 8072
YP_008126565.1 NC_021537_p30 hypothetical protein phrog_25628 unknown function unknown function -1 20123 20713
YP_008126558.1 NC_021537_p23 hypothetical protein singleton unknown function unknown function -1 17975 18361
YP_008126572.1 NC_021537_p37 hypothetical protein singleton unknown function unknown function -1 22923 23138
YP_008126585.1 NC_021537_p50 hypothetical protein phrog_30850 unknown function unknown function -1 35971 37125
YP_008126569.1 NC_021537_p34 hypothetical protein singleton unknown function unknown function -1 22083 22271
YP_008126589.1 NC_021537_p54 hypothetical protein phrog_18530 unknown function unknown function -1 39199 39651
YP_008126541.1 NC_021537_p6 hypothetical protein phrog_12 portal protein head and packaging -1 4128 5936
YP_008126567.1 NC_021537_p32 hypothetical protein singleton unknown function unknown function -1 20896 21063
YP_008126537.1 NC_021537_p2 hypothetical protein phrog_36181 unknown function unknown function -1 377 1126
YP_008126576.1 NC_021537_p41 hypothetical protein singleton unknown function unknown function 1 24191 24586
YP_008126539.1 NC_021537_p4 hypothetical protein phrog_1623 virion structural protein head and packaging -1 1525 2490
YP_008126579.1 NC_021537_p44 hypothetical protein phrog_1627 unknown function unknown function -1 26539 28236
YP_008126580.1 NC_021537_p45 hypothetical protein phrog_18315 unknown function unknown function -1 28251 31067
YP_008126574.1 NC_021537_p39 hypothetical protein singleton unknown function unknown function -1 23436 23678
YP_008126571.1 NC_021537_p36 hypothetical protein phrog_17157 unknown function unknown function -1 22681 22926
YP_008126564.1 NC_021537_p29 hypothetical protein phrog_37067 unknown function unknown function -1 19734 20126
YP_008126581.1 NC_021537_p46 hypothetical protein singleton unknown function unknown function -1 31067 33349
YP_008126549.1 NC_021537_p14 hypothetical protein singleton unknown function unknown function -1 11195 11446
YP_008126553.1 NC_021537_p18 hypothetical protein singleton unknown function unknown function -1 12529 12717
YP_008126555.1 NC_021537_p20 hypothetical protein phrog_5889 unknown function unknown function -1 12935 13552
YP_008126548.1 NC_021537_p13 hypothetical protein phrog_21385 unknown function unknown function -1 10918 11202
YP_008126560.1 NC_021537_p25 hypothetical protein phrog_36235 unknown function unknown function -1 18603 19025
YP_008126557.1 NC_021537_p22 hypothetical protein singleton unknown function unknown function -1 14231 17605
YP_008126587.1 NC_021537_p52 hypothetical protein phrog_18409 minor tail protein tail -1 37726 38640
YP_008126542.1 NC_021537_p7 hypothetical protein phrog_2 terminase large subunit head and packaging -1 6013 7524
YP_008126570.1 NC_021537_p35 hypothetical protein singleton unknown function unknown function 1 22257 22550
YP_008126566.1 NC_021537_p31 hypothetical protein singleton unknown function unknown function -1 20706 20903
YP_008126536.1 NC_021537_p1 hypothetical protein phrog_18530 unknown function unknown function -1 1 377
YP_008126577.1 NC_021537_p42 hypothetical protein phrog_6788 unknown function unknown function -1 24748 25419
YP_008126590.1 NC_021537_p55 hypothetical protein singleton unknown function unknown function -1 39651 39784
YP_008126575.1 NC_021537_p40 hypothetical protein singleton unknown function unknown function -1 23749 24018