Genomic map of Mycobacterium phage Leo (NC_021556)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_021556
Definition
Mycobacterium phage Leo, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Liefievirus; unclassified Liefievirus.
DB of origin
REFSEQ
Length
39981
Host Name
Mycobacterium tuberculosis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
59
%GC
66.86
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_008129770.1 NC_021556_p15 hypothetical protein phrog_3656 tail assembly chaperone tail 1 11103 11480
YP_008129758.1 NC_021556_p3 portal protein phrog_104 portal protein head and packaging 1 1905 3419
YP_008129811.1 NC_021556_p56 hypothetical protein phrog_658 unknown function unknown function 1 38522 38857
YP_008129787.1 NC_021556_p32 integrase phrog_216 integrase integration and excision -1 27479 28150
YP_008129778.1 NC_021556_p23 hypothetical protein phrog_7598 unknown function unknown function 1 22608 22928
YP_008129812.1 NC_021556_p57 HNH endonuclease phrog_7328 unknown function unknown function 1 38956 39198
YP_008129771.1 NC_021556_p16 tape measure protein phrog_971 endolysin lysis 1 11480 15493
YP_008129810.1 NC_021556_p55 hypothetical protein phrog_5505 unknown function unknown function 1 38308 38490
YP_008129764.1 NC_021556_p9 hypothetical protein phrog_1290 head-tail adaptor connector 1 8330 8827
YP_008129761.1 NC_021556_p6 hypothetical protein phrog_233 head scaffolding protein head and packaging 1 6531 7073
YP_008129809.1 NC_021556_p54 hypothetical protein phrog_5436 unknown function unknown function 1 37517 38308
YP_008129783.1 NC_021556_p28 lysin B phrog_102 endolysin lysis 1 24959 26167
YP_008129803.1 NC_021556_p48 RuvC phrog_7576 unknown function unknown function 1 35019 35459
YP_008129767.1 NC_021556_p12 hypothetical protein phrog_123 tail terminator connector 1 9430 9873
YP_008129785.1 NC_021556_p30 hypothetical protein phrog_1177 unknown function unknown function 1 26629 26868
YP_008129780.1 NC_021556_p25 hypothetical protein phrog_9511 unknown function unknown function 1 23113 23388
YP_008129802.1 NC_021556_p47 hypothetical protein phrog_2247 unknown function unknown function 1 34678 35022
YP_008129766.1 NC_021556_p11 hypothetical protein phrog_387 neck protein connector 1 9170 9433
YP_008129807.1 NC_021556_p52 hypothetical protein phrog_7600 unknown function unknown function 1 36676 37173
YP_008129776.1 NC_021556_p21 hypothetical protein phrog_1736 minor tail protein tail 1 20024 20458
YP_008129801.1 NC_021556_p46 hypothetical protein phrog_7826 unknown function unknown function 1 34361 34681
YP_008129791.1 NC_021556_p36 hypothetical protein phrog_10116 unknown function unknown function 1 29390 29572
YP_008129797.1 NC_021556_p42 hypothetical protein phrog_4171 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 31630 33054
YP_008129782.1 NC_021556_p27 lysin A phrog_880 endolysin lysis 1 23643 24959
YP_008129813.1 NC_021556_p58 hypothetical protein phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism 1 39222 39548
YP_008129808.1 NC_021556_p53 hypothetical protein phrog_11054 unknown function unknown function 1 37263 37514
YP_008129793.1 NC_021556_p38 hypothetical protein phrog_7486 unknown function unknown function 1 29916 30065
YP_008129775.1 NC_021556_p20 minor tail protein phrog_1565 minor tail protein tail 1 18877 20013
YP_008129790.1 NC_021556_p35 hypothetical protein phrog_549 unknown function unknown function 1 28854 29390
YP_008129781.1 NC_021556_p26 hypothetical protein phrog_8517 unknown function unknown function 1 23388 23582
YP_008129779.1 NC_021556_p24 hypothetical protein phrog_8923 unknown function unknown function 1 22931 23113
YP_008129765.1 NC_021556_p10 hypothetical protein phrog_763 head-tail adaptor connector 1 8827 9183
YP_008129798.1 NC_021556_p43 hypothetical protein phrog_7227 unknown function unknown function 1 33057 33590
YP_008129799.1 NC_021556_p44 hypothetical protein phrog_3926 replication initiation protein DNA, RNA and nucleotide metabolism 1 33791 34162
YP_008129756.1 NC_021556_p1 hypothetical protein phrog_1459 terminase small subunit head and packaging 1 60 404
YP_008129788.1 NC_021556_p33 RDF protein phrog_7506 recombination directionality factor integration and excision 1 28151 28396
YP_008129794.1 NC_021556_p39 hypothetical protein phrog_7392 unknown function unknown function 1 30065 30415
YP_008129804.1 NC_021556_p49 RuvC phrog_159 RuvC-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 35456 36046
YP_008129773.1 NC_021556_p18 minor tail protein phrog_110 minor tail protein tail 1 16656 18419
YP_008129768.1 NC_021556_p13 major tail subunit phrog_117 major tail protein tail 1 9870 10484
YP_008129805.1 NC_021556_p50 hypothetical protein phrog_13172 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 36019 36153
YP_008129796.1 NC_021556_p41 hypothetical protein phrog_412 exonuclease VIII DNA, RNA and nucleotide metabolism 1 30548 31633
YP_008129762.1 NC_021556_p7 capsid protein phrog_10 major head protein head and packaging 1 7119 8054
YP_008129777.1 NC_021556_p22 minor tail protein phrog_7565 minor tail protein tail 1 20458 22593
YP_008129763.1 NC_021556_p8 hypothetical protein phrog_3101 unknown function unknown function 1 8091 8318
YP_008129760.1 NC_021556_p5 hypothetical protein phrog_1757 unknown function unknown function 1 6206 6412
YP_008129792.1 NC_021556_p37 ASC-1-like protein phrog_986 RNA-binding protein DNA, RNA and nucleotide metabolism 1 29569 29919
YP_008129814.1 NC_021556_p59 hypothetical protein phrog_3468 unknown function unknown function 1 39642 39863
YP_008129769.1 NC_021556_p14 virion protein phrog_1861 unknown function unknown function 1 10585 11094
YP_008129795.1 NC_021556_p40 hypothetical protein phrog_6734 unknown function unknown function 1 30399 30551
YP_008129789.1 NC_021556_p34 hypothetical protein phrog_5081 unknown function unknown function 1 28393 28791
YP_008129757.1 NC_021556_p2 terminase phrog_2 terminase large subunit head and packaging 1 376 1908
YP_008129806.1 NC_021556_p51 hypothetical protein phrog_9043 unknown function unknown function 1 36174 36665
YP_008129774.1 NC_021556_p19 hypothetical protein phrog_1697 minor tail protein tail 1 18419 18880
YP_008129772.1 NC_021556_p17 minor tail protein phrog_106 minor tail protein tail 1 15493 16665
YP_008129800.1 NC_021556_p45 hypothetical protein phrog_21970 unknown function unknown function 1 34182 34364
YP_008129784.1 NC_021556_p29 hypothetical protein phrog_7198 holin lysis 1 26193 26543
YP_008129786.1 NC_021556_p31 hypothetical protein phrog_798 unknown function unknown function 1 26865 27482
YP_008129759.1 NC_021556_p4 hypothetical protein phrog_1752 head maturation protease head and packaging 1 3420 6209