| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_021558 |
Definition |
Paenibacillus phage PG1 genomic sequence. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae. |
DB of origin |
REFSEQ |
Length |
37644 |
Host Name |
Paenibacillus glucanolyticus |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
67 |
%GC |
42.39 |
Number of singletons |
26 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_008129917.1 | NC_021558_p51 | hypothetical protein | singleton | unknown function | unknown function | 1 | 29772 | 30086 |
| YP_008129890.1 | NC_021558_p24 | LexA repressor | phrog_8 | transcriptional regulator | transcription regulation | -1 | 16847 | 17176 |
| YP_008129897.1 | NC_021558_p31 | hypothetical protein | phrog_13817 | unknown function | unknown function | 1 | 19366 | 19635 |
| YP_008129901.1 | NC_021558_p35 | hypothetical protein | phrog_1227 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 22441 | 23253 |
| YP_008129908.1 | NC_021558_p42 | hypothetical protein | singleton | unknown function | unknown function | 1 | 26977 | 27144 |
| YP_008129874.1 | NC_021558_p8 | hypothetical protein | phrog_347 | tail terminator | connector | 1 | 3857 | 4243 |
| YP_008129875.1 | NC_021558_p9 | hypothetical protein | phrog_158 | major tail protein | tail | 1 | 4240 | 4653 |
| YP_008129912.1 | NC_021558_p46 | hypothetical protein | singleton | unknown function | unknown function | 1 | 27884 | 28156 |
| YP_008129867.1 | NC_021558_p1 | portal protein | singleton | unknown function | unknown function | 1 | 47 | 655 |
| YP_008129905.1 | NC_021558_p39 | RNA polymerase sigma factor | phrog_351 | RNA polymerase sigma factor | transcription regulation | 1 | 25058 | 25798 |
| YP_008129904.1 | NC_021558_p38 | hypothetical protein | singleton | unknown function | unknown function | 1 | 24720 | 25061 |
| YP_008129916.1 | NC_021558_p50 | hypothetical protein | singleton | unknown function | unknown function | 1 | 29590 | 29781 |
| YP_008129878.1 | NC_021558_p12 | membrane protein | phrog_31409 | tail length tape measure protein | tail | 1 | 5437 | 6402 |
| YP_008129873.1 | NC_021558_p7 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 3401 | 3850 |
| YP_008129889.1 | NC_021558_p23 | membrane associated lipoprotein | phrog_87 | metallo-protease | other | -1 | 16385 | 16840 |
| YP_008129924.1 | NC_021558_p58 | hypothetical protein | phrog_27108 | unknown function | unknown function | 1 | 31811 | 32059 |
| YP_008129910.1 | NC_021558_p44 | hypothetical protein | phrog_154 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 27345 | 27554 |
| YP_008129881.1 | NC_021558_p15 | hypothetical protein | phrog_32308 | unknown function | unknown function | 1 | 8331 | 10184 |
| YP_008129931.1 | NC_021558_p65 | hypothetical protein | singleton | unknown function | unknown function | 1 | 34362 | 34523 |
| YP_008129883.1 | NC_021558_p17 | hypothetical protein | singleton | unknown function | unknown function | 1 | 11071 | 11295 |
| YP_008129900.1 | NC_021558_p34 | recombinase | phrog_148 | RecT-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 21699 | 22454 |
| YP_008129894.1 | NC_021558_p28 | hypothetical protein | singleton | unknown function | unknown function | 1 | 18592 | 18915 |
| YP_008129879.1 | NC_021558_p13 | tail tape measure protein | singleton | unknown function | unknown function | 1 | 6408 | 7958 |
| YP_008129880.1 | NC_021558_p14 | hypothetical protein | phrog_1194 | unknown function | unknown function | 1 | 7972 | 8331 |
| YP_008129899.1 | NC_021558_p33 | hypothetical protein | phrog_1499 | unknown function | unknown function | 1 | 20065 | 21693 |
| YP_008129876.1 | NC_021558_p10 | hypothetical protein | phrog_34587 | unknown function | unknown function | 1 | 4703 | 5065 |
| YP_008129930.1 | NC_021558_p64 | hypothetical protein | phrog_119 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 34073 | 34384 |
| YP_008129884.1 | NC_021558_p18 | hypothetical protein | singleton | unknown function | unknown function | 1 | 11261 | 12724 |
| YP_008129925.1 | NC_021558_p59 | hypothetical protein | singleton | unknown function | unknown function | 1 | 32064 | 32396 |
| YP_008129929.1 | NC_021558_p63 | hypothetical protein | singleton | unknown function | unknown function | 1 | 33865 | 34071 |
| YP_008129932.1 | NC_021558_p66 | hypothetical protein | phrog_1066 | unknown function | unknown function | 1 | 34615 | 34980 |
| YP_008129927.1 | NC_021558_p61 | hypothetical protein | singleton | unknown function | unknown function | 1 | 33214 | 33432 |
| YP_008129888.1 | NC_021558_p22 | hypothetical protein | phrog_297 | holin | lysis | 1 | 14624 | 14866 |
| YP_008129886.1 | NC_021558_p20 | holin | phrog_199 | holin | lysis | 1 | 13497 | 13955 |
| YP_008129870.1 | NC_021558_p4 | hypothetical protein | phrog_5279 | unknown function | unknown function | 1 | 2634 | 2816 |
| YP_008129902.1 | NC_021558_p36 | hypothetical protein | phrog_7370 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 23698 | 24087 |
| YP_008129895.1 | NC_021558_p29 | hypothetical protein | phrog_12765 | unknown function | unknown function | 1 | 18949 | 19098 |
| YP_008129877.1 | NC_021558_p11 | hypothetical protein | singleton | unknown function | unknown function | 1 | 5086 | 5328 |
| YP_008129911.1 | NC_021558_p45 | hypothetical protein | phrog_13561 | unknown function | unknown function | 1 | 27654 | 27887 |
| YP_008129914.1 | NC_021558_p48 | hypothetical protein | singleton | unknown function | unknown function | 1 | 28960 | 29145 |
| YP_008129885.1 | NC_021558_p19 | hypothetical protein | singleton | unknown function | unknown function | 1 | 12770 | 13390 |
| YP_008129898.1 | NC_021558_p32 | hypothetical protein | singleton | unknown function | unknown function | 1 | 19565 | 19843 |
| YP_008129887.1 | NC_021558_p21 | N-acetylmuramyl-L-alanine amidase | phrog_670 | endolysin | lysis | 1 | 13882 | 14622 |
| YP_008129933.1 | NC_021558_p67 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 36657 | 37644 |
| YP_008129913.1 | NC_021558_p47 | hypothetical protein | singleton | unknown function | unknown function | 1 | 28302 | 28949 |
| YP_008129920.1 | NC_021558_p54 | hypothetical protein | singleton | unknown function | unknown function | 1 | 30657 | 31037 |
| YP_008129893.1 | NC_021558_p27 | anti-repressor protein | phrog_63 | anti-repressor Ant | transcription regulation | 1 | 17784 | 18578 |
| YP_008129919.1 | NC_021558_p53 | hypothetical protein | singleton | unknown function | unknown function | 1 | 30256 | 30660 |
| YP_008129928.1 | NC_021558_p62 | hypothetical protein | phrog_478 | site-specific recombination directionality factor RDF | integration and excision | 1 | 33489 | 33872 |
| YP_008129903.1 | NC_021558_p37 | hypothetical protein | phrog_20437 | DNA replication initiation | DNA, RNA and nucleotide metabolism | 1 | 24091 | 24723 |
| YP_008129926.1 | NC_021558_p60 | positive control sigma-like factor | phrog_1190 | RNA polymerase sigma factor | transcription regulation | 1 | 32476 | 32934 |
| YP_008129909.1 | NC_021558_p43 | hypothetical protein | singleton | unknown function | unknown function | 1 | 27160 | 27315 |
| YP_008129868.1 | NC_021558_p2 | peptidase S14 ClpP | phrog_94 | head maturation protease | head and packaging | 1 | 669 | 1382 |
| YP_008129922.1 | NC_021558_p56 | hypothetical protein | singleton | unknown function | unknown function | 1 | 31249 | 31440 |
| YP_008129882.1 | NC_021558_p16 | hypothetical protein | phrog_23118 | unknown function | unknown function | 1 | 10254 | 10754 |
| YP_008129871.1 | NC_021558_p5 | DNA packaging protein | phrog_5223 | neck protein | connector | 1 | 2797 | 3090 |
| YP_008129907.1 | NC_021558_p41 | dUTPase | phrog_173 | nucleoside triphosphate pyrophosphohydrolase | DNA, RNA and nucleotide metabolism | 1 | 26405 | 26947 |
| YP_008129906.1 | NC_021558_p40 | hypothetical protein | phrog_843 | Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 25795 | 26319 |
| YP_008129921.1 | NC_021558_p55 | hypothetical protein | singleton | unknown function | unknown function | 1 | 31034 | 31252 |
| YP_008129923.1 | NC_021558_p57 | hypothetical protein | phrog_8538 | unknown function | unknown function | 1 | 31437 | 31844 |
| YP_008129915.1 | NC_021558_p49 | hypothetical protein | phrog_35669 | unknown function | unknown function | 1 | 29196 | 29531 |
| YP_008129918.1 | NC_021558_p52 | hypothetical protein | singleton | unknown function | unknown function | 1 | 30083 | 30259 |
| YP_008129892.1 | NC_021558_p26 | hypothetical protein | phrog_989 | unknown function | unknown function | 1 | 17572 | 17787 |
| YP_008129869.1 | NC_021558_p3 | hypothetical protein | phrog_10 | major head protein | head and packaging | 1 | 1379 | 2620 |
| YP_008129896.1 | NC_021558_p30 | hypothetical protein | singleton | unknown function | unknown function | -1 | 19095 | 19301 |
| YP_008129891.1 | NC_021558_p25 | hypothetical protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 17360 | 17575 |
| YP_008129872.1 | NC_021558_p6 | head-tail adaptor | phrog_1951 | head-tail adaptor | connector | 1 | 3087 | 3398 |