Genomic map of Paenibacillus phage PG1 (NC_021558)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_021558
Definition
Paenibacillus phage PG1 genomic sequence.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
37644
Host Name
Paenibacillus glucanolyticus
Host domain
Bacteria
Is prophage?
undef
Number of proteins
67
%GC
42.39
Number of singletons
26
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_008129917.1 NC_021558_p51 hypothetical protein singleton unknown function unknown function 1 29772 30086
YP_008129890.1 NC_021558_p24 LexA repressor phrog_8 transcriptional regulator transcription regulation -1 16847 17176
YP_008129897.1 NC_021558_p31 hypothetical protein phrog_13817 unknown function unknown function 1 19366 19635
YP_008129901.1 NC_021558_p35 hypothetical protein phrog_1227 exonuclease DNA, RNA and nucleotide metabolism 1 22441 23253
YP_008129908.1 NC_021558_p42 hypothetical protein singleton unknown function unknown function 1 26977 27144
YP_008129874.1 NC_021558_p8 hypothetical protein phrog_347 tail terminator connector 1 3857 4243
YP_008129875.1 NC_021558_p9 hypothetical protein phrog_158 major tail protein tail 1 4240 4653
YP_008129912.1 NC_021558_p46 hypothetical protein singleton unknown function unknown function 1 27884 28156
YP_008129867.1 NC_021558_p1 portal protein singleton unknown function unknown function 1 47 655
YP_008129905.1 NC_021558_p39 RNA polymerase sigma factor phrog_351 RNA polymerase sigma factor transcription regulation 1 25058 25798
YP_008129904.1 NC_021558_p38 hypothetical protein singleton unknown function unknown function 1 24720 25061
YP_008129916.1 NC_021558_p50 hypothetical protein singleton unknown function unknown function 1 29590 29781
YP_008129878.1 NC_021558_p12 membrane protein phrog_31409 tail length tape measure protein tail 1 5437 6402
YP_008129873.1 NC_021558_p7 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 3401 3850
YP_008129889.1 NC_021558_p23 membrane associated lipoprotein phrog_87 metallo-protease other -1 16385 16840
YP_008129924.1 NC_021558_p58 hypothetical protein phrog_27108 unknown function unknown function 1 31811 32059
YP_008129910.1 NC_021558_p44 hypothetical protein phrog_154 replication initiation protein DNA, RNA and nucleotide metabolism 1 27345 27554
YP_008129881.1 NC_021558_p15 hypothetical protein phrog_32308 unknown function unknown function 1 8331 10184
YP_008129931.1 NC_021558_p65 hypothetical protein singleton unknown function unknown function 1 34362 34523
YP_008129883.1 NC_021558_p17 hypothetical protein singleton unknown function unknown function 1 11071 11295
YP_008129900.1 NC_021558_p34 recombinase phrog_148 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 21699 22454
YP_008129894.1 NC_021558_p28 hypothetical protein singleton unknown function unknown function 1 18592 18915
YP_008129879.1 NC_021558_p13 tail tape measure protein singleton unknown function unknown function 1 6408 7958
YP_008129880.1 NC_021558_p14 hypothetical protein phrog_1194 unknown function unknown function 1 7972 8331
YP_008129899.1 NC_021558_p33 hypothetical protein phrog_1499 unknown function unknown function 1 20065 21693
YP_008129876.1 NC_021558_p10 hypothetical protein phrog_34587 unknown function unknown function 1 4703 5065
YP_008129930.1 NC_021558_p64 hypothetical protein phrog_119 HNH endonuclease DNA, RNA and nucleotide metabolism 1 34073 34384
YP_008129884.1 NC_021558_p18 hypothetical protein singleton unknown function unknown function 1 11261 12724
YP_008129925.1 NC_021558_p59 hypothetical protein singleton unknown function unknown function 1 32064 32396
YP_008129929.1 NC_021558_p63 hypothetical protein singleton unknown function unknown function 1 33865 34071
YP_008129932.1 NC_021558_p66 hypothetical protein phrog_1066 unknown function unknown function 1 34615 34980
YP_008129927.1 NC_021558_p61 hypothetical protein singleton unknown function unknown function 1 33214 33432
YP_008129888.1 NC_021558_p22 hypothetical protein phrog_297 holin lysis 1 14624 14866
YP_008129886.1 NC_021558_p20 holin phrog_199 holin lysis 1 13497 13955
YP_008129870.1 NC_021558_p4 hypothetical protein phrog_5279 unknown function unknown function 1 2634 2816
YP_008129902.1 NC_021558_p36 hypothetical protein phrog_7370 HNH endonuclease DNA, RNA and nucleotide metabolism 1 23698 24087
YP_008129895.1 NC_021558_p29 hypothetical protein phrog_12765 unknown function unknown function 1 18949 19098
YP_008129877.1 NC_021558_p11 hypothetical protein singleton unknown function unknown function 1 5086 5328
YP_008129911.1 NC_021558_p45 hypothetical protein phrog_13561 unknown function unknown function 1 27654 27887
YP_008129914.1 NC_021558_p48 hypothetical protein singleton unknown function unknown function 1 28960 29145
YP_008129885.1 NC_021558_p19 hypothetical protein singleton unknown function unknown function 1 12770 13390
YP_008129898.1 NC_021558_p32 hypothetical protein singleton unknown function unknown function 1 19565 19843
YP_008129887.1 NC_021558_p21 N-acetylmuramyl-L-alanine amidase phrog_670 endolysin lysis 1 13882 14622
YP_008129933.1 NC_021558_p67 portal protein phrog_12 portal protein head and packaging 1 36657 37644
YP_008129913.1 NC_021558_p47 hypothetical protein singleton unknown function unknown function 1 28302 28949
YP_008129920.1 NC_021558_p54 hypothetical protein singleton unknown function unknown function 1 30657 31037
YP_008129893.1 NC_021558_p27 anti-repressor protein phrog_63 anti-repressor Ant transcription regulation 1 17784 18578
YP_008129919.1 NC_021558_p53 hypothetical protein singleton unknown function unknown function 1 30256 30660
YP_008129928.1 NC_021558_p62 hypothetical protein phrog_478 site-specific recombination directionality factor RDF integration and excision 1 33489 33872
YP_008129903.1 NC_021558_p37 hypothetical protein phrog_20437 DNA replication initiation DNA, RNA and nucleotide metabolism 1 24091 24723
YP_008129926.1 NC_021558_p60 positive control sigma-like factor phrog_1190 RNA polymerase sigma factor transcription regulation 1 32476 32934
YP_008129909.1 NC_021558_p43 hypothetical protein singleton unknown function unknown function 1 27160 27315
YP_008129868.1 NC_021558_p2 peptidase S14 ClpP phrog_94 head maturation protease head and packaging 1 669 1382
YP_008129922.1 NC_021558_p56 hypothetical protein singleton unknown function unknown function 1 31249 31440
YP_008129882.1 NC_021558_p16 hypothetical protein phrog_23118 unknown function unknown function 1 10254 10754
YP_008129871.1 NC_021558_p5 DNA packaging protein phrog_5223 neck protein connector 1 2797 3090
YP_008129907.1 NC_021558_p41 dUTPase phrog_173 nucleoside triphosphate pyrophosphohydrolase DNA, RNA and nucleotide metabolism 1 26405 26947
YP_008129906.1 NC_021558_p40 hypothetical protein phrog_843 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 25795 26319
YP_008129921.1 NC_021558_p55 hypothetical protein singleton unknown function unknown function 1 31034 31252
YP_008129923.1 NC_021558_p57 hypothetical protein phrog_8538 unknown function unknown function 1 31437 31844
YP_008129915.1 NC_021558_p49 hypothetical protein phrog_35669 unknown function unknown function 1 29196 29531
YP_008129918.1 NC_021558_p52 hypothetical protein singleton unknown function unknown function 1 30083 30259
YP_008129892.1 NC_021558_p26 hypothetical protein phrog_989 unknown function unknown function 1 17572 17787
YP_008129869.1 NC_021558_p3 hypothetical protein phrog_10 major head protein head and packaging 1 1379 2620
YP_008129896.1 NC_021558_p30 hypothetical protein singleton unknown function unknown function -1 19095 19301
YP_008129891.1 NC_021558_p25 hypothetical protein phrog_3 transcriptional repressor transcription regulation 1 17360 17575
YP_008129872.1 NC_021558_p6 head-tail adaptor phrog_1951 head-tail adaptor connector 1 3087 3398