Genomic map of Salmonella phage FSL SP-058 (NC_021772)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_021772
Definition
Salmonella phage FSL SP-058, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Ithacavirus.
DB of origin
REFSEQ
Length
72394
Host Name
Salmonella enterica
Host domain
Bacteria
Is prophage?
undef
Number of proteins
86
%GC
39.58
Number of singletons
4
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_008239428.1 NC_021772_p24 hypothetical protein phrog_26972 unknown function unknown function 1 10044 10394
YP_008239429.1 NC_021772_p25 hypothetical protein phrog_3224 unknown function unknown function 1 10521 10784
YP_008239446.1 NC_021772_p42 hypothetical protein phrog_27230 unknown function unknown function 1 21218 21523
YP_008239460.1 NC_021772_p56 hypothetical protein phrog_1682 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 32909 33292
YP_008239466.1 NC_021772_p62 hypothetical protein phrog_2220 unknown function unknown function -1 46921 49248
YP_008239447.1 NC_021772_p43 hypothetical protein phrog_23585 unknown function unknown function 1 21552 21812
YP_008239477.1 NC_021772_p73 hypothetical protein phrog_16160 unknown function unknown function 1 57192 57392
YP_008239438.1 NC_021772_p34 hypothetical protein phrog_22456 unknown function unknown function 1 14678 15004
YP_008239430.1 NC_021772_p26 hypothetical protein phrog_3054 unknown function unknown function 1 10781 11176
YP_008239426.1 NC_021772_p22 RNA polymerase subunit phrog_2051 RNA polymerase DNA, RNA and nucleotide metabolism 1 8428 9654
YP_008239434.1 NC_021772_p30 hypothetical protein phrog_154 replication initiation protein DNA, RNA and nucleotide metabolism 1 13280 13588
YP_008239450.1 NC_021772_p46 hypothetical protein phrog_27750 unknown function unknown function 1 23519 23764
YP_008239481.1 NC_021772_p77 tailspike protein phrog_11182 tail spike protein tail -1 58820 60619
YP_008239422.1 NC_021772_p18 RNA polymerase subunit phrog_2166 N4-like RNA polymerase DNA, RNA and nucleotide metabolism 1 6745 7668
YP_008239444.1 NC_021772_p40 hypothetical protein phrog_10440 unknown function unknown function 1 18982 20424
YP_008239423.1 NC_021772_p19 hypothetical protein singleton unknown function unknown function 1 7671 7811
YP_008239449.1 NC_021772_p45 hypothetical protein phrog_24535 unknown function unknown function 1 23046 23519
YP_008239409.1 NC_021772_p5 hypothetical protein phrog_24093 unknown function unknown function 1 1592 1831
YP_008239451.1 NC_021772_p47 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 23745 26336
YP_008239475.1 NC_021772_p71 lysozyme phrog_7 endolysin lysis 1 56190 56681
YP_008239417.1 NC_021772_p13 hypothetical protein singleton unknown function unknown function 1 4449 4670
YP_008239432.1 NC_021772_p28 deoxyuridine 5'-triphosphate nucleotidohydrolase phrog_135 dUTPase DNA, RNA and nucleotide metabolism 1 12281 12730
YP_008239463.1 NC_021772_p59 virion RNA polymerase phrog_2206 virion RNA polymerase DNA, RNA and nucleotide metabolism -1 34157 44944
YP_008239439.1 NC_021772_p35 hypothetical protein phrog_1297 ATPase other 1 15054 16070
YP_008239486.1 NC_021772_p82 hypothetical protein phrog_9325 unknown function unknown function 1 68677 69285
YP_008239443.1 NC_021772_p39 hypothetical protein phrog_5534 unknown function unknown function 1 17935 18747
YP_008239476.1 NC_021772_p72 lysis protein phrog_2466 Rz-like spanin lysis 1 56678 57223
YP_008239455.1 NC_021772_p51 hypothetical protein phrog_2139 exonuclease DNA, RNA and nucleotide metabolism 1 28013 28963
YP_008239413.1 NC_021772_p9 hypothetical protein phrog_4099 unknown function unknown function 1 2994 3410
YP_008239441.1 NC_021772_p37 hypothetical protein phrog_28967 unknown function unknown function 1 17267 17524
YP_008239480.1 NC_021772_p76 hypothetical protein phrog_33925 unknown function unknown function 1 58487 58807
YP_008239412.1 NC_021772_p8 hypothetical protein phrog_30458 unknown function unknown function 1 2692 2874
YP_008239431.1 NC_021772_p27 agglutinating adhesin phrog_26246 tail protein tail 1 11207 12196
YP_008239471.1 NC_021772_p67 hypothetical protein phrog_2346 unknown function unknown function -1 52880 53218
YP_008239415.1 NC_021772_p11 hypothetical protein phrog_28062 unknown function unknown function 1 3833 4033
YP_008239485.1 NC_021772_p81 hypothetical protein phrog_2109 unknown function unknown function -1 65796 66491
YP_008239421.1 NC_021772_p17 hypothetical protein phrog_16571 unknown function unknown function 1 6543 6773
YP_008239437.1 NC_021772_p33 hypothetical protein phrog_1470 TciB-like inhibition of cell division or resistance to colicin moron, auxiliary metabolic gene and host takeover 1 14524 14688
YP_008239464.1 NC_021772_p60 hypothetical protein phrog_6467 unknown function unknown function -1 45020 46444
YP_008239484.1 NC_021772_p80 hypothetical protein phrog_38 terminase large subunit head and packaging -1 64202 65803
YP_008239489.1 NC_021772_p85 hypothetical protein phrog_10396 transcriptional activator transcription regulation 1 71552 71794
YP_008239445.1 NC_021772_p41 NinI protein phrog_246 NinI-like serine-threonine phosphatase other 1 20488 21165
YP_008239473.1 NC_021772_p69 hypothetical protein phrog_198 holin lysis 1 55521 55895
YP_008239410.1 NC_021772_p6 hypothetical protein phrog_7648 unknown function unknown function 1 1942 2160
YP_008239427.1 NC_021772_p23 hypothetical protein phrog_23890 unknown function unknown function 1 9664 10044
YP_008239482.1 NC_021772_p78 tailspike protein phrog_1819 tail spike protein tail -1 60678 63452
YP_008239470.1 NC_021772_p66 hypothetical protein phrog_2120 tail length tape measure protein tail -1 51782 52873
YP_008239469.1 NC_021772_p65 major coat protein phrog_1357 major head protein head and packaging -1 50596 51765
YP_008239490.1 NC_021772_p86 hypothetical protein phrog_26518 unknown function unknown function 1 71911 72153
YP_008239425.1 NC_021772_p21 hypothetical protein phrog_16571 unknown function unknown function 1 8040 8222
YP_008239433.1 NC_021772_p29 hypothetical protein singleton unknown function unknown function 1 13129 13287
YP_008239487.1 NC_021772_p83 hypothetical protein phrog_26483 unknown function unknown function 1 70063 71319
YP_008239435.1 NC_021772_p31 hypothetical protein phrog_24045 unknown function unknown function 1 13590 14015
YP_008239411.1 NC_021772_p7 GTP-binding protein phrog_289 GTP-binding domain other 1 2312 2671
YP_008239457.1 NC_021772_p53 hypothetical protein phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 31154 31882
YP_008239424.1 NC_021772_p20 hypothetical protein phrog_22821 unknown function unknown function 1 7811 8047
YP_008239453.1 NC_021772_p49 thymidylate synthetase phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism 1 26710 27342
YP_008239458.1 NC_021772_p54 single-strand DNA binding protein phrog_743 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 31892 32632
YP_008239405.1 NC_021772_p1 hypothetical protein phrog_5020 unknown function unknown function 1 86 427
YP_008239479.1 NC_021772_p75 hypothetical protein phrog_17779 unknown function unknown function 1 57811 58446
YP_008239408.1 NC_021772_p4 hypothetical protein phrog_17641 unknown function unknown function 1 1290 1583
YP_008239474.1 NC_021772_p70 holin phrog_217 holin lysis 1 55895 56185
YP_008239442.1 NC_021772_p38 hypothetical protein phrog_35527 unknown function unknown function 1 17735 17932
YP_008239468.1 NC_021772_p64 hypothetical protein phrog_2130 unknown function unknown function -1 49932 50480
YP_008239406.1 NC_021772_p2 hypothetical protein phrog_464 unknown function unknown function 1 672 1010
YP_008239419.1 NC_021772_p15 hypothetical protein phrog_335 phosphatase other 1 5836 6339
YP_008239472.1 NC_021772_p68 hypothetical protein phrog_1216 portal protein head and packaging -1 53240 55360
YP_008239488.1 NC_021772_p84 hypothetical protein phrog_18211 unknown function unknown function 1 71321 71551
YP_008239420.1 NC_021772_p16 hypothetical protein singleton unknown function unknown function 1 6347 6550
YP_008239416.1 NC_021772_p12 hypothetical protein phrog_32354 unknown function unknown function 1 4026 4238
YP_008239407.1 NC_021772_p3 hypothetical protein phrog_7840 unknown function unknown function 1 1087 1293
YP_008239483.1 NC_021772_p79 hypothetical protein phrog_2125 virion structural protein head and packaging -1 63454 64158
YP_008239454.1 NC_021772_p50 hypothetical protein phrog_1965 unknown function unknown function 1 27345 27974
YP_008239440.1 NC_021772_p36 hypothetical protein phrog_1314 HNH endonuclease DNA, RNA and nucleotide metabolism 1 16045 17181
YP_008239478.1 NC_021772_p74 hypothetical protein phrog_4366 head fiber protein head and packaging 1 57434 57733
YP_008239436.1 NC_021772_p32 TerB phrog_632 tellurite resistance moron, auxiliary metabolic gene and host takeover 1 14074 14523
YP_008239414.1 NC_021772_p10 hypothetical protein phrog_25167 unknown function unknown function 1 3459 3641
YP_008239459.1 NC_021772_p55 hypothetical protein phrog_20544 unknown function unknown function 1 32691 32906
YP_008239462.1 NC_021772_p58 hypothetical protein phrog_25115 unknown function unknown function 1 33900 34127
YP_008239456.1 NC_021772_p52 hypothetical protein phrog_2135 DNA primase DNA, RNA and nucleotide metabolism 1 28972 31134
YP_008239418.1 NC_021772_p14 hypothetical protein phrog_20461 unknown function unknown function 1 4931 5170
YP_008239461.1 NC_021772_p57 hypothetical protein phrog_27655 unknown function unknown function 1 33294 33740
YP_008239465.1 NC_021772_p61 hypothetical protein phrog_2646 unknown function unknown function -1 46454 46918
YP_008239448.1 NC_021772_p44 DNA helicase phrog_325 Dda-like helicase DNA, RNA and nucleotide metabolism 1 21799 23043
YP_008239452.1 NC_021772_p48 hypothetical protein phrog_474 phosphofructokinase other 1 26333 26710
YP_008239467.1 NC_021772_p63 hypothetical protein phrog_2050 virion structural protein head and packaging -1 49280 49921