| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_021772 |
Definition |
Salmonella phage FSL SP-058, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Ithacavirus. |
DB of origin |
REFSEQ |
Length |
72394 |
Host Name |
Salmonella enterica |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
86 |
%GC |
39.58 |
Number of singletons |
4 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_008239428.1 | NC_021772_p24 | hypothetical protein | phrog_26972 | unknown function | unknown function | 1 | 10044 | 10394 |
| YP_008239429.1 | NC_021772_p25 | hypothetical protein | phrog_3224 | unknown function | unknown function | 1 | 10521 | 10784 |
| YP_008239446.1 | NC_021772_p42 | hypothetical protein | phrog_27230 | unknown function | unknown function | 1 | 21218 | 21523 |
| YP_008239460.1 | NC_021772_p56 | hypothetical protein | phrog_1682 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 32909 | 33292 |
| YP_008239466.1 | NC_021772_p62 | hypothetical protein | phrog_2220 | unknown function | unknown function | -1 | 46921 | 49248 |
| YP_008239447.1 | NC_021772_p43 | hypothetical protein | phrog_23585 | unknown function | unknown function | 1 | 21552 | 21812 |
| YP_008239477.1 | NC_021772_p73 | hypothetical protein | phrog_16160 | unknown function | unknown function | 1 | 57192 | 57392 |
| YP_008239438.1 | NC_021772_p34 | hypothetical protein | phrog_22456 | unknown function | unknown function | 1 | 14678 | 15004 |
| YP_008239430.1 | NC_021772_p26 | hypothetical protein | phrog_3054 | unknown function | unknown function | 1 | 10781 | 11176 |
| YP_008239426.1 | NC_021772_p22 | RNA polymerase subunit | phrog_2051 | RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 8428 | 9654 |
| YP_008239434.1 | NC_021772_p30 | hypothetical protein | phrog_154 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 13280 | 13588 |
| YP_008239450.1 | NC_021772_p46 | hypothetical protein | phrog_27750 | unknown function | unknown function | 1 | 23519 | 23764 |
| YP_008239481.1 | NC_021772_p77 | tailspike protein | phrog_11182 | tail spike protein | tail | -1 | 58820 | 60619 |
| YP_008239422.1 | NC_021772_p18 | RNA polymerase subunit | phrog_2166 | N4-like RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 6745 | 7668 |
| YP_008239444.1 | NC_021772_p40 | hypothetical protein | phrog_10440 | unknown function | unknown function | 1 | 18982 | 20424 |
| YP_008239423.1 | NC_021772_p19 | hypothetical protein | singleton | unknown function | unknown function | 1 | 7671 | 7811 |
| YP_008239449.1 | NC_021772_p45 | hypothetical protein | phrog_24535 | unknown function | unknown function | 1 | 23046 | 23519 |
| YP_008239409.1 | NC_021772_p5 | hypothetical protein | phrog_24093 | unknown function | unknown function | 1 | 1592 | 1831 |
| YP_008239451.1 | NC_021772_p47 | DNA polymerase | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 23745 | 26336 |
| YP_008239475.1 | NC_021772_p71 | lysozyme | phrog_7 | endolysin | lysis | 1 | 56190 | 56681 |
| YP_008239417.1 | NC_021772_p13 | hypothetical protein | singleton | unknown function | unknown function | 1 | 4449 | 4670 |
| YP_008239432.1 | NC_021772_p28 | deoxyuridine 5'-triphosphate nucleotidohydrolase | phrog_135 | dUTPase | DNA, RNA and nucleotide metabolism | 1 | 12281 | 12730 |
| YP_008239463.1 | NC_021772_p59 | virion RNA polymerase | phrog_2206 | virion RNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 34157 | 44944 |
| YP_008239439.1 | NC_021772_p35 | hypothetical protein | phrog_1297 | ATPase | other | 1 | 15054 | 16070 |
| YP_008239486.1 | NC_021772_p82 | hypothetical protein | phrog_9325 | unknown function | unknown function | 1 | 68677 | 69285 |
| YP_008239443.1 | NC_021772_p39 | hypothetical protein | phrog_5534 | unknown function | unknown function | 1 | 17935 | 18747 |
| YP_008239476.1 | NC_021772_p72 | lysis protein | phrog_2466 | Rz-like spanin | lysis | 1 | 56678 | 57223 |
| YP_008239455.1 | NC_021772_p51 | hypothetical protein | phrog_2139 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 28013 | 28963 |
| YP_008239413.1 | NC_021772_p9 | hypothetical protein | phrog_4099 | unknown function | unknown function | 1 | 2994 | 3410 |
| YP_008239441.1 | NC_021772_p37 | hypothetical protein | phrog_28967 | unknown function | unknown function | 1 | 17267 | 17524 |
| YP_008239480.1 | NC_021772_p76 | hypothetical protein | phrog_33925 | unknown function | unknown function | 1 | 58487 | 58807 |
| YP_008239412.1 | NC_021772_p8 | hypothetical protein | phrog_30458 | unknown function | unknown function | 1 | 2692 | 2874 |
| YP_008239431.1 | NC_021772_p27 | agglutinating adhesin | phrog_26246 | tail protein | tail | 1 | 11207 | 12196 |
| YP_008239471.1 | NC_021772_p67 | hypothetical protein | phrog_2346 | unknown function | unknown function | -1 | 52880 | 53218 |
| YP_008239415.1 | NC_021772_p11 | hypothetical protein | phrog_28062 | unknown function | unknown function | 1 | 3833 | 4033 |
| YP_008239485.1 | NC_021772_p81 | hypothetical protein | phrog_2109 | unknown function | unknown function | -1 | 65796 | 66491 |
| YP_008239421.1 | NC_021772_p17 | hypothetical protein | phrog_16571 | unknown function | unknown function | 1 | 6543 | 6773 |
| YP_008239437.1 | NC_021772_p33 | hypothetical protein | phrog_1470 | TciB-like inhibition of cell division or resistance to colicin | moron, auxiliary metabolic gene and host takeover | 1 | 14524 | 14688 |
| YP_008239464.1 | NC_021772_p60 | hypothetical protein | phrog_6467 | unknown function | unknown function | -1 | 45020 | 46444 |
| YP_008239484.1 | NC_021772_p80 | hypothetical protein | phrog_38 | terminase large subunit | head and packaging | -1 | 64202 | 65803 |
| YP_008239489.1 | NC_021772_p85 | hypothetical protein | phrog_10396 | transcriptional activator | transcription regulation | 1 | 71552 | 71794 |
| YP_008239445.1 | NC_021772_p41 | NinI protein | phrog_246 | NinI-like serine-threonine phosphatase | other | 1 | 20488 | 21165 |
| YP_008239473.1 | NC_021772_p69 | hypothetical protein | phrog_198 | holin | lysis | 1 | 55521 | 55895 |
| YP_008239410.1 | NC_021772_p6 | hypothetical protein | phrog_7648 | unknown function | unknown function | 1 | 1942 | 2160 |
| YP_008239427.1 | NC_021772_p23 | hypothetical protein | phrog_23890 | unknown function | unknown function | 1 | 9664 | 10044 |
| YP_008239482.1 | NC_021772_p78 | tailspike protein | phrog_1819 | tail spike protein | tail | -1 | 60678 | 63452 |
| YP_008239470.1 | NC_021772_p66 | hypothetical protein | phrog_2120 | tail length tape measure protein | tail | -1 | 51782 | 52873 |
| YP_008239469.1 | NC_021772_p65 | major coat protein | phrog_1357 | major head protein | head and packaging | -1 | 50596 | 51765 |
| YP_008239490.1 | NC_021772_p86 | hypothetical protein | phrog_26518 | unknown function | unknown function | 1 | 71911 | 72153 |
| YP_008239425.1 | NC_021772_p21 | hypothetical protein | phrog_16571 | unknown function | unknown function | 1 | 8040 | 8222 |
| YP_008239433.1 | NC_021772_p29 | hypothetical protein | singleton | unknown function | unknown function | 1 | 13129 | 13287 |
| YP_008239487.1 | NC_021772_p83 | hypothetical protein | phrog_26483 | unknown function | unknown function | 1 | 70063 | 71319 |
| YP_008239435.1 | NC_021772_p31 | hypothetical protein | phrog_24045 | unknown function | unknown function | 1 | 13590 | 14015 |
| YP_008239411.1 | NC_021772_p7 | GTP-binding protein | phrog_289 | GTP-binding domain | other | 1 | 2312 | 2671 |
| YP_008239457.1 | NC_021772_p53 | hypothetical protein | phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 31154 | 31882 |
| YP_008239424.1 | NC_021772_p20 | hypothetical protein | phrog_22821 | unknown function | unknown function | 1 | 7811 | 8047 |
| YP_008239453.1 | NC_021772_p49 | thymidylate synthetase | phrog_85 | thymidylate synthase | DNA, RNA and nucleotide metabolism | 1 | 26710 | 27342 |
| YP_008239458.1 | NC_021772_p54 | single-strand DNA binding protein | phrog_743 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 31892 | 32632 |
| YP_008239405.1 | NC_021772_p1 | hypothetical protein | phrog_5020 | unknown function | unknown function | 1 | 86 | 427 |
| YP_008239479.1 | NC_021772_p75 | hypothetical protein | phrog_17779 | unknown function | unknown function | 1 | 57811 | 58446 |
| YP_008239408.1 | NC_021772_p4 | hypothetical protein | phrog_17641 | unknown function | unknown function | 1 | 1290 | 1583 |
| YP_008239474.1 | NC_021772_p70 | holin | phrog_217 | holin | lysis | 1 | 55895 | 56185 |
| YP_008239442.1 | NC_021772_p38 | hypothetical protein | phrog_35527 | unknown function | unknown function | 1 | 17735 | 17932 |
| YP_008239468.1 | NC_021772_p64 | hypothetical protein | phrog_2130 | unknown function | unknown function | -1 | 49932 | 50480 |
| YP_008239406.1 | NC_021772_p2 | hypothetical protein | phrog_464 | unknown function | unknown function | 1 | 672 | 1010 |
| YP_008239419.1 | NC_021772_p15 | hypothetical protein | phrog_335 | phosphatase | other | 1 | 5836 | 6339 |
| YP_008239472.1 | NC_021772_p68 | hypothetical protein | phrog_1216 | portal protein | head and packaging | -1 | 53240 | 55360 |
| YP_008239488.1 | NC_021772_p84 | hypothetical protein | phrog_18211 | unknown function | unknown function | 1 | 71321 | 71551 |
| YP_008239420.1 | NC_021772_p16 | hypothetical protein | singleton | unknown function | unknown function | 1 | 6347 | 6550 |
| YP_008239416.1 | NC_021772_p12 | hypothetical protein | phrog_32354 | unknown function | unknown function | 1 | 4026 | 4238 |
| YP_008239407.1 | NC_021772_p3 | hypothetical protein | phrog_7840 | unknown function | unknown function | 1 | 1087 | 1293 |
| YP_008239483.1 | NC_021772_p79 | hypothetical protein | phrog_2125 | virion structural protein | head and packaging | -1 | 63454 | 64158 |
| YP_008239454.1 | NC_021772_p50 | hypothetical protein | phrog_1965 | unknown function | unknown function | 1 | 27345 | 27974 |
| YP_008239440.1 | NC_021772_p36 | hypothetical protein | phrog_1314 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 16045 | 17181 |
| YP_008239478.1 | NC_021772_p74 | hypothetical protein | phrog_4366 | head fiber protein | head and packaging | 1 | 57434 | 57733 |
| YP_008239436.1 | NC_021772_p32 | TerB | phrog_632 | tellurite resistance | moron, auxiliary metabolic gene and host takeover | 1 | 14074 | 14523 |
| YP_008239414.1 | NC_021772_p10 | hypothetical protein | phrog_25167 | unknown function | unknown function | 1 | 3459 | 3641 |
| YP_008239459.1 | NC_021772_p55 | hypothetical protein | phrog_20544 | unknown function | unknown function | 1 | 32691 | 32906 |
| YP_008239462.1 | NC_021772_p58 | hypothetical protein | phrog_25115 | unknown function | unknown function | 1 | 33900 | 34127 |
| YP_008239456.1 | NC_021772_p52 | hypothetical protein | phrog_2135 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 28972 | 31134 |
| YP_008239418.1 | NC_021772_p14 | hypothetical protein | phrog_20461 | unknown function | unknown function | 1 | 4931 | 5170 |
| YP_008239461.1 | NC_021772_p57 | hypothetical protein | phrog_27655 | unknown function | unknown function | 1 | 33294 | 33740 |
| YP_008239465.1 | NC_021772_p61 | hypothetical protein | phrog_2646 | unknown function | unknown function | -1 | 46454 | 46918 |
| YP_008239448.1 | NC_021772_p44 | DNA helicase | phrog_325 | Dda-like helicase | DNA, RNA and nucleotide metabolism | 1 | 21799 | 23043 |
| YP_008239452.1 | NC_021772_p48 | hypothetical protein | phrog_474 | phosphofructokinase | other | 1 | 26333 | 26710 |
| YP_008239467.1 | NC_021772_p63 | hypothetical protein | phrog_2050 | virion structural protein | head and packaging | -1 | 49280 | 49921 |