Genomic map of Salmonella phage FSL SP-031 (NC_021775)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_021775
Definition
Salmonella phage FSL SP-031, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Guernseyvirinae; Cornellvirus.
DB of origin
REFSEQ
Length
42215
Host Name
Salmonella enterica
Host domain
Bacteria
Is prophage?
undef
Number of proteins
59
%GC
51.06
Number of singletons
3
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_008239601.1 NC_021775_p4 hypothetical protein phrog_1365 unknown function unknown function -1 3426 3776
YP_008239642.1 NC_021775_p45 hypothetical protein phrog_477 head-tail adaptor Ad1 connector 1 29374 29883
YP_008239598.1 NC_021775_p1 hypothetical protein singleton unknown function unknown function -1 24 263
YP_008239643.1 NC_021775_p46 hypothetical protein phrog_3614 unknown function unknown function 1 29883 30500
YP_008239599.1 NC_021775_p2 helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism -1 457 2931
YP_008239620.1 NC_021775_p23 hypothetical protein phrog_2508 holin lysis 1 16907 17206
YP_008239621.1 NC_021775_p24 lysozyme phrog_7 endolysin lysis 1 17187 17669
YP_008239600.1 NC_021775_p3 hypothetical protein phrog_93 endonuclease DNA, RNA and nucleotide metabolism -1 3098 3433
YP_008239611.1 NC_021775_p14 hypothetical protein phrog_3127 unknown function unknown function -1 10232 10723
YP_008239604.1 NC_021775_p7 hypothetical protein phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 6777 7472
YP_008239651.1 NC_021775_p54 tail length tape measure-related protein phrog_1538 tail length tape measure protein tail 1 34197 36425
YP_008239612.1 NC_021775_p15 hypothetical protein phrog_3 transcriptional repressor transcription regulation 1 11098 11313
YP_008239607.1 NC_021775_p10 hypothetical protein phrog_924 unknown function unknown function -1 9313 9504
YP_008239614.1 NC_021775_p17 hypothetical protein singleton unknown function unknown function 1 14040 14291
YP_008239637.1 NC_021775_p40 hypothetical protein phrog_206 head scaffolding protein head and packaging 1 26664 27371
YP_008239649.1 NC_021775_p52 hypothetical protein phrog_313 Tail assembly chaperone tail 1 33423 33842
YP_008239656.1 NC_021775_p59 tail fiber protein phrog_7173 tail spike protein tail 1 40351 42192
YP_008239652.1 NC_021775_p55 hypothetical protein phrog_384 virion structural protein head and packaging 1 36428 36928
YP_008239605.1 NC_021775_p8 endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism -1 7542 8015
YP_008239617.1 NC_021775_p20 hypothetical protein phrog_236 nucleotide kinase other 1 15885 16166
YP_008239608.1 NC_021775_p11 hypothetical protein phrog_4965 unknown function unknown function -1 9501 9749
YP_008239636.1 NC_021775_p39 hypothetical protein phrog_20712 unknown function unknown function -1 26333 26512
YP_008239645.1 NC_021775_p48 hypothetical protein phrog_169 tail completion or Neck1 protein connector 1 30856 31260
YP_008239634.1 NC_021775_p37 hypothetical protein phrog_2536 Rz-like spanin lysis 1 25718 26074
YP_008239622.1 NC_021775_p25 hypothetical protein phrog_2180 unknown function unknown function 1 17987 18175
YP_008239644.1 NC_021775_p47 hypothetical protein phrog_161 head closure Hc1 connector 1 30500 30859
YP_008239602.1 NC_021775_p5 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 3845 6115
YP_008239641.1 NC_021775_p44 hypothetical protein phrog_4451 unknown function unknown function 1 29176 29370
YP_008239618.1 NC_021775_p21 hypothetical protein phrog_4947 unknown function unknown function 1 16150 16551
YP_008239629.1 NC_021775_p32 hypothetical protein phrog_2 terminase large subunit head and packaging 1 20039 21310
YP_008239650.1 NC_021775_p53 hypothetical protein phrog_4557 unknown function unknown function 1 34010 34204
YP_008239635.1 NC_021775_p38 hypothetical protein phrog_1267 Rz-like spanin lysis 1 26067 26306
YP_008239603.1 NC_021775_p6 Mom phrog_1384 Mom-like DNA modification protein other -1 6112 6717
YP_008239648.1 NC_021775_p51 hypothetical protein singleton unknown function unknown function -1 32897 33259
YP_008239640.1 NC_021775_p43 hypothetical protein phrog_4069 Hoc-like head decoration head and packaging 1 28792 29142
YP_008239615.1 NC_021775_p18 hypothetical protein phrog_23836 unknown function unknown function 1 14896 15288
YP_008239639.1 NC_021775_p42 hypothetical protein phrog_1954 virion structural protein head and packaging 1 28485 28775
YP_008239625.1 NC_021775_p28 hypothetical protein phrog_9023 unknown function unknown function 1 18713 18913
YP_008239638.1 NC_021775_p41 coat protein phrog_247 major head protein head and packaging 1 27374 28423
YP_008239610.1 NC_021775_p13 hypothetical protein phrog_22725 unknown function unknown function -1 9977 10228
YP_008239627.1 NC_021775_p30 hypothetical protein phrog_9799 unknown function unknown function 1 19202 19426
YP_008239619.1 NC_021775_p22 hypothetical protein phrog_2359 holin lysis 1 16624 16905
YP_008239631.1 NC_021775_p34 head morphogenesis protein phrog_241 head morphogenesis head and packaging 1 22940 23983
YP_008239633.1 NC_021775_p36 hypothetical protein phrog_424 phosphoadenosine phosphosulfate reductase moron, auxiliary metabolic gene and host takeover -1 24473 25327
YP_008239623.1 NC_021775_p26 hypothetical protein phrog_4684 unknown function unknown function 1 18302 18475
YP_008239616.1 NC_021775_p19 hypothetical protein phrog_3766 unknown function unknown function 1 15537 15731
YP_008239654.1 NC_021775_p57 hypothetical protein phrog_329 minor tail protein tail 1 37437 37802
YP_008239647.1 NC_021775_p50 tail protein phrog_290 minor tail protein tail 1 31679 32845
YP_008239653.1 NC_021775_p56 hypothetical protein phrog_396 minor tail protein tail 1 36925 37440
YP_008239630.1 NC_021775_p33 phage structural protein phrog_145 portal protein head and packaging 1 21327 22820
YP_008239632.1 NC_021775_p35 hypothetical protein phrog_3945 Hoc-like head decoration head and packaging 1 23985 24446
YP_008239606.1 NC_021775_p9 hypothetical protein phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 8015 9316
YP_008239609.1 NC_021775_p12 hypothetical protein phrog_13627 unknown function unknown function -1 9746 9928
YP_008239646.1 NC_021775_p49 hypothetical protein phrog_179 tail terminator connector 1 31257 31676
YP_008239628.1 NC_021775_p31 hypothetical protein phrog_3064 terminase head and packaging 1 19513 20064
YP_008239624.1 NC_021775_p27 hypothetical protein phrog_1402 unknown function unknown function 1 18468 18716
YP_008239626.1 NC_021775_p29 hypothetical protein phrog_268 unknown function unknown function 1 18987 19205
YP_008239655.1 NC_021775_p58 tail fiber protein phrog_469 tail protein tail 1 37865 40339
YP_008239613.1 NC_021775_p16 phage replicative helicase/primease phrog_3228 replicative helicase-primase DNA, RNA and nucleotide metabolism 1 11449 13749