Genomic map of Salmonella virus FSLSP030 (NC_021779)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_021779
Definition
Salmonella phage FSL SP-030, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Chivirus.
DB of origin
REFSEQ
Length
59746
Host Name
Salmonella enterica
Host domain
Bacteria
Is prophage?
undef
Number of proteins
71
%GC
56.55
Number of singletons
0
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_008239833.1 NC_021779_p3 hypothetical protein phrog_7401 unknown function unknown function -1 3522 3803
YP_008239863.1 NC_021779_p33 hypothetical protein phrog_2448 unknown function unknown function 1 34843 35805
YP_008239885.1 NC_021779_p55 hypothetical protein phrog_6886 unknown function unknown function -1 49720 50466
YP_008239856.1 NC_021779_p26 hypothetical protein phrog_1082 tail assembly protein tail 1 26195 27883
YP_008239853.1 NC_021779_p23 pre-tape measure frameshift protein G-T phrog_5260 tail protein tail 1 21198 21659
YP_008239855.1 NC_021779_p25 tape measure protein phrog_2335 tail length tape measure protein tail 1 21963 26189
YP_008239835.1 NC_021779_p5 hypothetical protein phrog_8318 unknown function unknown function 1 4504 4833
YP_008239850.1 NC_021779_p20 hypothetical protein phrog_27 tail completion or Neck1 protein connector 1 18816 19442
YP_008239879.1 NC_021779_p49 hypothetical protein phrog_8705 unknown function unknown function -1 45884 46105
YP_008239842.1 NC_021779_p12 terminase large subunit phrog_15 terminase large subunit head and packaging 1 11277 13352
YP_008239832.1 NC_021779_p2 DR0530-like primase phrog_1156 DNA primase DNA, RNA and nucleotide metabolism -1 940 3525
YP_008239898.1 NC_021779_p68 hypothetical protein phrog_3786 unknown function unknown function 1 58298 58570
YP_008239870.1 NC_021779_p40 hypothetical protein phrog_355 nucleoside 2-deoxyribosyltransferase DNA, RNA and nucleotide metabolism -1 41720 42181
YP_008239896.1 NC_021779_p66 hypothetical protein phrog_8635 unknown function unknown function 1 56770 56991
YP_008239861.1 NC_021779_p31 tail fiber protein phrog_7049 tail fiber protein tail 1 33075 33815
YP_008239854.1 NC_021779_p24 pre-tape measure frameshift protein G-T phrog_9221 tail length tape measure protein tail 1 21704 21901
YP_008239868.1 NC_021779_p38 virion protein phrog_873 endolysin head and packaging 1 40625 41338
YP_008239860.1 NC_021779_p30 hypothetical protein phrog_6284 tail protein tail 1 29182 33075
YP_008239857.1 NC_021779_p27 structural phage protein phrog_778 tail assembly protein tail 1 27893 28711
YP_008239892.1 NC_021779_p62 hypothetical protein phrog_6647 unknown function unknown function -1 53391 53762
YP_008239849.1 NC_021779_p19 hypothetical protein phrog_4858 unknown function unknown function 1 18451 18816
YP_008239844.1 NC_021779_p14 portal protein phrog_21 portal protein head and packaging 1 13614 15293
YP_008239883.1 NC_021779_p53 hypothetical protein phrog_8386 unknown function unknown function -1 48045 49142
YP_008239890.1 NC_021779_p60 hypothetical protein phrog_7734 unknown function unknown function -1 52557 52892
YP_008239891.1 NC_021779_p61 hypothetical protein phrog_7942 unknown function unknown function -1 52879 53319
YP_008239886.1 NC_021779_p56 hypothetical protein phrog_7587 unknown function unknown function -1 50656 50931
YP_008239880.1 NC_021779_p50 hypothetical protein phrog_9067 unknown function unknown function -1 46102 46296
YP_008239841.1 NC_021779_p11 TerS phrog_141 terminase small subunit head and packaging 1 10718 11287
YP_008239839.1 NC_021779_p9 hypothetical protein phrog_93 endonuclease DNA, RNA and nucleotide metabolism 1 8922 9209
YP_008239864.1 NC_021779_p34 hypothetical protein phrog_2448 unknown function unknown function 1 35819 36838
YP_008239834.1 NC_021779_p4 hypothetical protein phrog_7721 unknown function unknown function 1 4043 4441
YP_008239881.1 NC_021779_p51 hypothetical protein phrog_8209 unknown function unknown function -1 46307 47281
YP_008239888.1 NC_021779_p58 hypothetical protein phrog_724 exonuclease recombination-associated DNA, RNA and nucleotide metabolism -1 51172 52248
YP_008239858.1 NC_021779_p28 tail assembly protein phrog_1180 tail assembly chaperone tail 1 28723 28953
YP_008239874.1 NC_021779_p44 hypothetical protein phrog_8264 unknown function unknown function -1 44042 44494
YP_008239848.1 NC_021779_p18 hypothetical protein phrog_7559 unknown function unknown function 1 18155 18448
YP_008239884.1 NC_021779_p54 hypothetical protein phrog_8641 unknown function unknown function -1 49139 49693
YP_008239838.1 NC_021779_p8 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 6923 8920
YP_008239887.1 NC_021779_p57 hypothetical protein phrog_7200 unknown function unknown function -1 50936 51169
YP_008239895.1 NC_021779_p65 hypothetical protein phrog_9514 unknown function unknown function 1 56225 56773
YP_008239901.1 NC_021779_p71 hypothetical protein phrog_8116 unknown function unknown function 1 59016 59267
YP_008239867.1 NC_021779_p37 hypothetical protein phrog_7686 Rz-like spanin lysis 1 40283 40621
YP_008239876.1 NC_021779_p46 hypothetical protein phrog_3012 unknown function unknown function -1 44784 45065
YP_008239859.1 NC_021779_p29 hypothetical protein phrog_1196 tail assembly chaperone tail 1 28953 29192
YP_008239843.1 NC_021779_p13 head-tail joining protein lambda W phrog_75 head-tail adaptor Ad1 connector 1 13363 13617
YP_008239872.1 NC_021779_p42 hypothetical protein phrog_8098 unknown function unknown function -1 43067 43780
YP_008239894.1 NC_021779_p64 hypothetical protein phrog_10759 unknown function unknown function 1 55729 56211
YP_008239865.1 NC_021779_p35 hypothetical protein phrog_27578 unknown function unknown function 1 37252 38079
YP_008239871.1 NC_021779_p41 NinC protein phrog_424 phosphoadenosine phosphosulfate reductase moron, auxiliary metabolic gene and host takeover -1 42178 43077
YP_008239899.1 NC_021779_p69 hypothetical protein phrog_8059 unknown function unknown function 1 58573 58779
YP_008239900.1 NC_021779_p70 hypothetical protein phrog_7646 unknown function unknown function 1 58772 59023
YP_008239882.1 NC_021779_p52 DNA adenine methylase phrog_111 DNA methyltransferase other -1 47359 48045
YP_008239889.1 NC_021779_p59 hypothetical protein phrog_7965 unknown function unknown function -1 52229 52570
YP_008239846.1 NC_021779_p16 decorator protein D phrog_49 head decoration head and packaging 1 16636 17016
YP_008239873.1 NC_021779_p43 hypothetical protein phrog_1714 unknown function unknown function -1 43777 44040
YP_008239851.1 NC_021779_p21 hypothetical protein phrog_5078 tail terminator connector 1 19439 19942
YP_008239836.1 NC_021779_p6 hypothetical protein phrog_69 exonuclease DNA, RNA and nucleotide metabolism 1 4826 6163
YP_008239862.1 NC_021779_p32 hypothetical protein phrog_2448 unknown function unknown function 1 33885 34832
YP_008239847.1 NC_021779_p17 capsid protein E phrog_29 major head protein head and packaging 1 17029 18093
YP_008239875.1 NC_021779_p45 hypothetical protein phrog_9301 unknown function unknown function -1 44491 44787
YP_008239840.1 NC_021779_p10 helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism 1 9256 10731
YP_008239866.1 NC_021779_p36 hypothetical protein phrog_7226 unknown function unknown function 1 38089 40218
YP_008239878.1 NC_021779_p48 hypothetical protein phrog_9722 unknown function unknown function -1 45640 45894
YP_008239845.1 NC_021779_p15 prohead protease ClpP phrog_53 head maturation protease head and packaging 1 15335 16606
YP_008239831.1 NC_021779_p1 cro/c1 phrog_2339 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 599 886
YP_008239869.1 NC_021779_p39 hypothetical protein phrog_1275 Rz-like spanin lysis 1 41537 41719
YP_008239893.1 NC_021779_p63 hypothetical protein phrog_374 HNH endonuclease DNA, RNA and nucleotide metabolism -1 53953 54477
YP_008239852.1 NC_021779_p22 hypothetical protein phrog_807 major tail protein with Ig-like domain tail 1 19956 21101
YP_008239877.1 NC_021779_p47 hypothetical protein phrog_9072 thymidylate synthase complementing protein DNA, RNA and nucleotide metabolism -1 45146 45658
YP_008239897.1 NC_021779_p67 hypothetical protein phrog_10087 unknown function unknown function 1 57117 58286
YP_008239837.1 NC_021779_p7 hypothetical protein phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 6218 6814