Genomic map of Salmonella virus iEPS5 (NC_021783)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_021783
Definition
Salmonella phage iEPS5, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Chivirus.
DB of origin
REFSEQ
Length
59254
Host Name
Salmonella enterica
Host domain
Bacteria
Is prophage?
undef
Number of proteins
73
%GC
56.3
Number of singletons
0
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_008240233.1 NC_021783_p2 hypothetical protein phrog_7646 unknown function unknown function -1 795 1046
YP_008240301.1 NC_021783_p70 hypothetical protein phrog_7721 unknown function unknown function -1 54731 55147
YP_008240243.1 NC_021783_p12 hypothetical protein phrog_6647 unknown function unknown function 1 5993 6364
YP_008240284.1 NC_021783_p53 hypothetical protein phrog_5078 tail terminator connector -1 39207 39710
YP_008240293.1 NC_021783_p62 terminase large subunit phrog_15 terminase large subunit head and packaging -1 45821 47896
YP_008240240.1 NC_021783_p9 hypothetical protein phrog_2385 unknown function unknown function -1 4202 4402
YP_008240277.1 NC_021783_p46 tail assembly protein 1 phrog_1180 tail assembly chaperone tail -1 30202 30432
YP_008240270.1 NC_021783_p39 hypothetical protein phrog_10924 unknown function unknown function -1 21079 22305
YP_008240259.1 NC_021783_p28 hypothetical protein phrog_3012 unknown function unknown function 1 14801 15082
YP_008240254.1 NC_021783_p23 hypothetical protein phrog_8209 unknown function unknown function 1 12585 13559
YP_008240247.1 NC_021783_p16 recombination-associated protein RdgC phrog_724 exonuclease recombination-associated DNA, RNA and nucleotide metabolism 1 7507 8583
YP_008240287.1 NC_021783_p56 hypothetical protein phrog_7559 unknown function unknown function -1 40701 40994
YP_008240297.1 NC_021783_p66 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 50253 52292
YP_008240292.1 NC_021783_p61 head-to-tail joining protein W phrog_75 head-tail adaptor Ad1 connector -1 45556 45810
YP_008240238.1 NC_021783_p7 hypothetical protein phrog_7744 unknown function unknown function -1 3361 3564
YP_008240263.1 NC_021783_p32 hypothetical protein phrog_18367 unknown function unknown function 1 16630 16914
YP_008240237.1 NC_021783_p6 hypothetical protein phrog_9514 unknown function unknown function -1 2802 3350
YP_008240232.1 NC_021783_p1 hypothetical protein phrog_8116 unknown function unknown function -1 551 802
YP_008240236.1 NC_021783_p5 hypothetical protein phrog_8635 unknown function unknown function -1 2584 2805
YP_008240278.1 NC_021783_p47 tail assembly protein 2 phrog_778 tail assembly protein tail -1 30444 31262
YP_008240258.1 NC_021783_p27 hypothetical protein phrog_9072 thymidylate synthase complementing protein DNA, RNA and nucleotide metabolism 1 14208 14720
YP_008240300.1 NC_021783_p69 hypothetical protein phrog_8318 unknown function unknown function -1 54340 54765
YP_008240279.1 NC_021783_p48 hypothetical protein phrog_1082 tail assembly protein tail -1 31272 32960
YP_008240260.1 NC_021783_p29 hypothetical protein phrog_9301 unknown function unknown function 1 15079 15390
YP_008240295.1 NC_021783_p64 SNF2 domain-containing protein phrog_62 DNA helicase DNA, RNA and nucleotide metabolism -1 48442 49917
YP_008240251.1 NC_021783_p20 hypothetical protein phrog_8641 unknown function unknown function 1 10032 10706
YP_008240282.1 NC_021783_p51 hypothetical protein phrog_5260 tail protein tail -1 37496 37957
YP_008240283.1 NC_021783_p52 bacterial Ig-like domain-containing protein phrog_807 major tail protein with Ig-like domain tail -1 38054 39193
YP_008240299.1 NC_021783_p68 hypothetical protein phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 53010 54347
YP_008240296.1 NC_021783_p65 VRR-NUC domain-containing protein phrog_93 endonuclease DNA, RNA and nucleotide metabolism -1 49964 50251
YP_008240275.1 NC_021783_p44 hypothetical protein phrog_6284 tail protein tail -1 26083 29973
YP_008240261.1 NC_021783_p30 hypothetical protein phrog_8264 unknown function unknown function 1 15387 15839
YP_008240250.1 NC_021783_p19 hypothetical protein phrog_6886 unknown function unknown function 1 9295 10035
YP_008240289.1 NC_021783_p58 decorator protein D phrog_49 head decoration head and packaging -1 42133 42552
YP_008240245.1 NC_021783_p14 hypothetical protein phrog_7734 unknown function unknown function 1 6863 7198
YP_008240281.1 NC_021783_p50 hypothetical protein phrog_9221 tail length tape measure protein tail -1 37254 37451
YP_008240276.1 NC_021783_p45 hypothetical protein phrog_1196 tail assembly chaperone tail -1 29963 30202
YP_008240248.1 NC_021783_p17 hypothetical protein phrog_7200 unknown function unknown function 1 8586 8819
YP_008240294.1 NC_021783_p63 terminase small subunit phrog_141 terminase small subunit head and packaging -1 47886 48455
YP_008240286.1 NC_021783_p55 hypothetical protein phrog_4858 unknown function unknown function -1 40333 40698
YP_008240290.1 NC_021783_p59 prohead protease ClpP phrog_53 head maturation protease head and packaging -1 42567 43853
YP_008240257.1 NC_021783_p26 hypothetical protein phrog_9722 unknown function unknown function 1 13972 14226
YP_008240255.1 NC_021783_p24 hypothetical protein phrog_9067 unknown function unknown function 1 13570 13764
YP_008240280.1 NC_021783_p49 tape measure protein phrog_2335 tail length tape measure protein tail -1 32966 37261
YP_008240264.1 NC_021783_p33 hypothetical protein phrog_355 nucleoside 2-deoxyribosyltransferase DNA, RNA and nucleotide metabolism 1 16911 17372
YP_008240271.1 NC_021783_p40 hypothetical protein phrog_2448 unknown function unknown function -1 22320 23339
YP_008240302.1 NC_021783_p71 hypothetical protein phrog_7401 unknown function unknown function 1 55444 55671
YP_008240274.1 NC_021783_p43 hypothetical protein phrog_7049 tail fiber protein tail -1 25343 26083
YP_008240239.1 NC_021783_p8 hypothetical protein phrog_10310 unknown function unknown function -1 3576 4199
YP_008240242.1 NC_021783_p11 hypothetical protein phrog_4445 unknown function unknown function -1 4975 5232
YP_008240249.1 NC_021783_p18 hypothetical protein phrog_7587 unknown function unknown function 1 8824 9099
YP_008240235.1 NC_021783_p4 hypothetical protein phrog_10087 unknown function unknown function -1 1298 2458
YP_008240268.1 NC_021783_p37 lysis protein B phrog_7686 Rz-like spanin lysis -1 18471 18809
YP_008240266.1 NC_021783_p35 hypothetical protein phrog_15395 tail protein tail 1 17578 17748
YP_008240234.1 NC_021783_p3 hypothetical protein phrog_8059 unknown function unknown function -1 1039 1245
YP_008240262.1 NC_021783_p31 hypothetical protein phrog_8098 unknown function unknown function 1 15841 16554
YP_008240304.1 NC_021783_p73 HTH domain-containing protein phrog_2339 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 58289 58612
YP_008240291.1 NC_021783_p60 lambda family portal protein B phrog_21 portal protein head and packaging -1 43880 45559
YP_008240269.1 NC_021783_p38 hypothetical protein phrog_7226 unknown function unknown function -1 18874 21069
YP_008240285.1 NC_021783_p54 hypothetical protein phrog_27 tail completion or Neck1 protein connector -1 39707 40333
YP_008240267.1 NC_021783_p36 lysis protein A phrog_873 endolysin head and packaging -1 17754 18467
YP_008240252.1 NC_021783_p21 hypothetical protein phrog_8386 unknown function unknown function 1 10703 11803
YP_008240244.1 NC_021783_p13 hypothetical protein phrog_7942 unknown function unknown function 1 6436 6876
YP_008240265.1 NC_021783_p34 hypothetical protein phrog_1275 Rz-like spanin lysis -1 17373 17576
YP_008240273.1 NC_021783_p42 hypothetical protein phrog_2448 unknown function unknown function -1 24326 25333
YP_008240288.1 NC_021783_p57 major capsid protein E phrog_29 major head protein head and packaging -1 41056 42120
YP_008240272.1 NC_021783_p41 hypothetical protein phrog_2448 unknown function unknown function -1 23353 24315
YP_008240303.1 NC_021783_p72 primase phrog_1156 DNA primase DNA, RNA and nucleotide metabolism 1 55668 58253
YP_008240256.1 NC_021783_p25 hypothetical protein phrog_8705 unknown function unknown function 1 13767 13982
YP_008240246.1 NC_021783_p15 hypothetical protein phrog_7965 unknown function unknown function 1 7185 7526
YP_008240241.1 NC_021783_p10 hypothetical protein phrog_3199 unknown function unknown function -1 4417 4956
YP_008240253.1 NC_021783_p22 N-6-adenine-methyltransferase phrog_111 DNA methyltransferase other 1 11803 12507
YP_008240298.1 NC_021783_p67 hypothetical protein phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 52359 52955